Map Locations of contig_86878 (3442 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_86878

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79770 1 2235 bp MLOC_79770.1 Available Available LOC_Os03g41419.1, FRAME:-2, EVALUE:3e-110, 13103.m04459 protein serpin domain containing protein, putative, expressed





CDS Structure of MLOC_79770






Contig Sequence (3442 bp)

>contig_86878 3442 assembly3_WGSMorex_rbca.fasta
TGACGCGGTCACTGGGGAGATCCCCGCGGGTGTCCTGCTTCAACGTGTGCACCGTCCAGA
GTCGATGGCGCGCGCGACGATGAGTATTCTTCCACCGTCGACAACCCACCAAGGCGGTGC
GGCAATTCCGGGCTGTGGCACCACTGCAGATCCGATCATGGGCGATTTCCGGGCGGCAAG
GTCGTTCCCATGAGGCATGCTGGTGATGATGGAGGAGGATCTGGTGGACCAGGCGGCTAT
GGGTGCAAGTTTGCCAACGAAAGCTTGGTACAGCCTCATCCGCAGTCGTCGATGGCAGCA
CCCATGGGTGTCGTTACTTCGTTGGAGGTGTTGTGGGAAGATTCACGTTTACTGTGAGCC
CCGGGGAAACCCTAAATTCCGATTCCGGATCGAATGATGGCGAGGCTCGTGCATCATCAC
CCCCATGGGGGCATCCTCTTTTAGGATGTAAACATCAGCTGGAGACATAAGTGTTTAGCT
TCGGTAGTTGTACACAGGTTTCCGCATGCTTCTCGTGCGGTCATCAAGGTATAGAGGCAT
GGCTTCTACAATATGGACGACGACGAGTCTTGGCGGCAAGGTGCCGTGGGGTTTCAGCGC
TGGATACCATTTGATGGAAGCACGTAGGAGTGTGGCATTGTCTGGTGTCGTGGTGGCGTC
GACGGCGAATGGGCCTGTCAAGGTCAATGCATTGATTACTCCTGAAGATGGAAAGACAGA
AGATGGAGGTAACGGATTGTATAGCGTGTGCATGCAATGCATGTAGAGGGTTTGCTCGGC
CTGTGCTCCCGACTAGCCGACGGGTGGCTTCATGAGGCCATCAGATTTCATGAGGTCAGG
ACACATCATCAACCTTCTAGGTAGGGCCACCTTCTAGGTAGTTCTAGGTAGGGCCACACT
TTTTGGTAGAAAGGTGGCTTTGGTTGATTTATGTAATTATTTTACAATACAATATTTTAT
AATATAATAAAGATGGTTGTGTGTATCATTTGATGCAGAGCCGGGTTTATCCTCCTTTGT
GGAAAATGGTTTTCAAATATATATATATATACAACATGAGGGAGTACCCTATACTTGCAC
TATGCCTAAAGGGAGGCGCTGAATGCGGCATGCCCTAGCCCCAAGCGCTCATACTTATGC
TGCCTGAATGTGAGGTTCACGCACCCGAGTCGACGAGTTGCCTTGTCCGTCACCCAGAAT
ATTTTCCTTGATTAACCATCAAATATTAGAACATCAGTGGAGCCAAATTTAATCTTGGAA
GCCTTATCTAATCAATGTATCAACCATCGCCATACAAGAATTCTGCAGTGTCACCAAGTG
AAAAGGAAACAACATGTAGTCGCTTGGCAAGGCTAGATTTTCCTTCATGTTTCTCCTGTT
AAGTGACGCAAATCTATTATTAGGCCCAGCAGTACCGGTGAAACAAGAGCGCATTGTGAA
GGCCTAACTTGCCGCTAGTTGTGTAGAAGTTAATAACGCAGATATCCGGTGACATCAGAG
TAAGTTTATAGTAGGACTAGTAGTTCCCCGACCCATCAGTTTCAGGAATTCATGGGAAGA
TTTCATCGCATCTTTCACGAATTAGAAATTATTCTAGTATGTTTGGTGGTTGAGCATCAT
CAATGGCATTTTTCATATGAGTTTGAATTTGCATCCCAGCTCTTTCCCAAGCACATCATG
CGCGGACTTAACTTAGCATTTTTTTACTATAAACTTAGCACATTCTCTATACCCAGTTTG
GTAGTATCCTCATGGGCCCACAGCAGGATCCCGACCATGCTCGAATCAATGATTTTCTAA
CCAACTTAGATTGAGCTCCCAAATTATGCAAAAATGGTTTTCATACTTCATCAAGAATCA
TTTGATAAGCATGCTTACCTCATGTATTAAGTACCTCAAAGCATAAAGCTCCACATCAAT
CATGGATCATTGCCCTCGTGCAAACCTTGCACACAACAATCAAGACATTTCTTAAAAACA
ATTTATTTAATTTATTATACCGGCAGCATTATTGAATGTTGAAACCCATCACTTACATGT
AACAGTTTAGGTAATTAACTTACAAGACACTGATTTAGGGTAAACATACTATGAAGACAC
AGCGGGATTGGCAACATGACCAATGAAGAGCACTACACCGGCGATGTCTTCTCGAATAAG
GAAGAGGAAAGGGTGATTAGCGACGAAATCCATCCTTATGGGTAGTGACCGGTCTACAAT
CACATCGCCGGTTGCTGCTCCTGCCTTAGTTCCTTCTTCGTCTACTTCAACAAACGTTTT
GTGAAAAACAGATGAGATGTATAGGCCCATGGGAGAATTCACCATCTCCGAAAGATTGGC
CTCCAAACTGAATGGCAGTTGAAGACCCAAAGTTTTGAGCAATTTGTTTGCTTCAAATCC
AAAAGATATCTTGAACTTTGGGAGCATGAACTGTCCGACTTCAACCTCCTCCGTTGGGAT
ACGGTTCTCCAAAAAATCTGGTTCAGTGCTCAACTTTTGTGCCAAGCTTGAGAGACCGTC
ATGTGCTTCAGGAAGAAGAATGTACATGGAGAACTGCCTGTTGTCCCCACCATGTTGGTA
TGGAAGCTTAAGTACCTTCAAGTCGTCCGAATATGAAAGGTACTGCTTATTTGTACTAGA
CATGAATGGTGTTTGAACAGTGCTCCCATTAAGAAGGTGGAAATCATCATACTTTGTTTT
AGATTCATCAAACTTGTTGGTCCAAATTCCTTTGTAGTAAAGTGCATTACCAAGAACTAG
TCTAGTTGTATCGGCAATAGACCCCGCGGGGAGGATCTCTTCGATGAGACCTGCGGTGAC
ATTCTTTACCCAGGTATTCACTTGAGTAGCAGCTTCAGGAGCCTGGACCATTGCAAAATA
TATTAACACTTAGCAAAACTAACGAAACCATAATACATAAGCGAGTTGCGAAAATCCAAC
TCTGCTCCGAGGCTCATCTGCAAATGACAAAAAAATTAAAAACAAAATACTAAAAATTCA
AAAGCCTTAATTTTTTGTGTGGTAGATATTTTGATGCGTGAAGCCCACTCTAAATTTTAA
CTTATTTGGACATGTGAGCAGCTTTCGGCAAAAAAGAAAATCGGATCAGAACAACTCGTG
AAGAGTAAACCTTTTTTACACACCTGATTTGTCTTTTTTGCCGAGAGTTGCTCAGATATT
CAATTAAGTTGAAATTTGGAGCATTCCTCACATATGAAATTTCTACAACACAAAATTAGA
TTTTTTTTAAAAATTTCTAATATTTTATTTGTTTTTTTTTCGTGCGTGCGGGTGAAGATG
AAACCGAGAGCAGAAACGCTGCTCTCACTGAGTTGCAGTTTTGAGAATGATAAAAGTAAA
GAATTATAATATTATGTAATAAAATAGGTCTAAAGGTAGATATTTCTTTATACACACGAC
TGTTGGTATAAAGACCATTCAC