Contig Data
morexGenes
Links



Map Locations of contig_86837 (5047 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_86837

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79759 1 297 bp MLOC_79759.1 Available Available LOC_Os01g65720.1, FRAME:-2, EVALUE:6e-45, 13101.m07105 protein expressed protein
MLOC_79760 1 152 bp AK249251.1 Not available Available None





CDS Structure of MLOC_79759






CDS Structure of MLOC_79760






Contig Sequence (5047 bp)

>contig_86837 5047 assembly3_WGSMorex_rbca.fasta
TCGGTCTCTCCAAAGGACATGAAAAACGGACATTCTCCATAAGTATCAGAGATGATCTCA
ATGAGAAAAAAATCTGAATAAATACACACGCATCCAAGGTATTTTTTGTGATTGTTAAAG
AACACCACAAGGTATGCACCTTCTTTAAACCGCACGAGGGGATATGGCTTCCTGAAATAG
GCAGAGAACCATTCAGCTGCTTCAGCCCCTTCGTCGTAGGCAGAACCAGACCACTCCCAC
ACGAAGATGTCGTCAAGGGTGGCGCGCTCCACAGCCAAAGGGACCTTCAGTGTGTCCATT
CATCTATAGTACATTACTGCAATTAGCAGAGGATCAAATAAAAATATAAAATTGATCTAT
AGGAGATTTACTCTAAAACATAAAAAAGGAAATGACGCCACAATTCATCTTATAACCGCA
GTTAGCGTCAGTCAAAATCAAAATAATATGTACTACAAGGGTTTTGTTCTGAAACATAAA
AAAAGATGGTGCATCACAGGTCATAGTGTATCAAAGAGCATAAAAAGGTTGGAAACAAAT
TTCTTGAGAAGAAAAGCACAGTTAATTTCTTGGTTGTTGATATATGATTGTGATATTACA
ATGGACTCACATATATGATCACTTATGGGGATGGCTCAGAATTTTTCACTCAAGTAGTAA
AGATGGCTAACCGGCGATGAAAGAAGTGCACAAACTGCCAATGATTTCTTTCAGATGATT
AAAAAATTACATACAATGTTGTCCTATATAGTATGCACCTTATATCTAAACACGTGTATA
TACATACTTGTCAAATGAAACGGAAAGTTAGACTTCCTCAACACAATTATATATGGAGTT
GTGATGGATTATGTTGGATATAATACTCATGCTTCATCCAAAAACTCATTTGTTCCTTGC
TCCGACTATGAGGAGGGCACCTGAAGGTAAATTTTCTGACTATTCTTCAGTTTCCTTGCA
AAATTGAGACCGTAACCTGGTCACTCATGAAACAAAACTGTTTGGGTATAATATAGTTCA
TCCAAGTGCTACAGTTGATAATATGCTATCTATTTCTGTCTTATAAGAGAATAAATTGAT
ATAACAGGTGGCCCTCAAAACTCAAAAATAGATTATTTAGGGATTTTTGCACAACAGGAT
AAGAAATACACTATGCATTCTTCACATAAATATAATGTAGAAATTATCTAGTTAAGTCAG
TGGACAATTGAAGATTATCCTCATAAGAATTTTTTCATGAAAAACGATTCTGGATAATTT
GCAACAGACGCCACAAATTAGCATAATTTTTAGCCAGGGCTGAGTAACACTCTTATCCTC
GATGTAGATATGTTTATTATGATTCTTGAATCAAACTAATAAATTGAAATGAGAAACAAA
GTGATCCAAACGAATAGAAAAATTCAGATAGTACCTTTAAAAGTGTGTTATAAGCCTCTA
ACAAGCGGTTAGCAGCTGGAGCAAACCCTTGCAAACAGAAGCAAGTTTCAGTGCACAGCC
TACTAAGAAGCAATCAATCATGAACAAACAACAGGTAATAAAAACCAGTCACGACAGAAC
AGGTTGCTGGAAAAACAAAGACTGCTTAAGGCTGTTATTTTATTAGAAATTTGTACTGAC
CTGTTGTGCCCCTTCGGGGTGAATTTGATAGGTTGGTCCATCTTTGTTTTCTCCGTACCA
ATAGTATGTCGCGATATTGTGATCATACAAAATCCCACCACCATGGGCTTGAATGGCATT
TCCATCAGTGTCCAGCCATACCTTACCGGGAGAAAAGTACATGCTATCATTTCCGCCTTT
TGTTGGGTTCACATCAGTTGTTTCAGCAGGAAAGAACATGTCATGTAATGCTGAGGACCC
ATCCAGATATTCATCGATGATCTTTGCAACCTTGCTAGATCTCCGACGTTTGACTGCACT
TTTCACTGCATGAGGATTCACCTTGTGAGAAGGTGGCAACCGAAAGTGCTCTTCCTCAAC
CTCTTCCAATTCTCTGGTGGCAGGCAGATGGCTGGAATAGCTATGGGCATGCCAATTGTT
TACTTGATGGCTGATGAAAAATAGGCCGACAATGATGGTGCATCCCACCAAGCCCATTAC
AATAAAAGATAAGGAAGATCCACATCCAGCATCAAAGTTGAGAATAGATGGTTTTCGGTG
TGTATTCCTCATCTTCCATCTCCCTCTACTAACCTTCATAAGAAAGTTGCAGTAATAAAT
CCACTATGCTTTACATGCATGTAAAACGTTGAAACATTTAACCATGGAGAGCAAAGAAAA
GTAATAAAACAGAATAATCATGGATGAGTGTGGATCAAATGAGCGAAGAAGTTCCAACTT
AATCATATACATACCCTTATTCGGTAGTATATTCATGACAAGTATTAGCCAAACATTAAA
AATCAAGAAAAAATTGAGCAAGTAGACCAAGAATCTGCTCAACCAATTTTATCTAGCGCA
TATTAAAGGAGAGAATGATCACATTGGTAACTTGTAAAGTTGTAATAGAGAACTATCATG
GGGCGCAGACATGCATCAATGGGGCATGCAACGGTGCCAACCCGACCACACAGATTCAAA
CCTAATTGCTACCTTAATTTGAAGTGTGAACCCAAATGTCAGAAAATGATTAGCTTGAAA
CAAATTAATAAAATCGTATAATTTTTTGAAACTGCCGAAGTGCCGAATTGATTGAATGCA
CCTAGTCATTAGCACTCAATTACGCCTTCGAATAGAAAGATGGCCTTCCTAGGTTTGTTT
CGACACGATAATGACATTTTTTGATCTTGCATATTATCATGGCCTGTTTACCATGTTTAA
TCTCTATAAAAAAAATACACCTGTAGTAACAGAAGCAAGAGAAGAGCACAACATACACAA
CACAAAAGATGAGACACGTTGAATCTGAGTTTGCTATTCTTACAACACTACACGCCAGAG
ATCTGTCATCTGTGAGTAACAAAAGCTGATACTTAGAAAATGAAAGCCTCAAAGAACAAA
GAGATGCATTCCTCTCACCTGAATCACCTCAGTGTCGACTGAAGCCGAGATGCCGAGGAA
ATCCACGATCCCCGCCAAGTCTGTAGAACCCCAACCAACCATCAGCACCAGGCATGAGCA
AGCATTTCCTAATCCAGTGCGGCAAAATGGGTGGGCTAGAAACCTTATGTTGGATCCTGC
CATTCTCCTCGTCGCGGTTGAGGCTGTCCCCCTACCGGTTCTGCTGCGTGATGGGCGATC
TGTCTCCGAGGAGCCTCCGGACAACTACAGCAGCAGCAGGTCAGCAGATGAAACCCATAG
TGTACCGGTCGACGGATGAGGCGAGATCGCCACGGACGATGGCGATGCTTGCCCGCGCGG
TGAGGTTACCGTGGGAGAGCACCGAGGGGTCTTGGGAGACGTCGGCGAGGCAATGCAGCG
CGAGGTCTAGGCTACACAGATTATTCCTTAACAATAGCAGGTAGCAGTTGGTTTTGTTTA
GTTCAGCATCTAACATGGTGTGAACAATAATATGAATTACAAAAAAAGAATATGTGTGAC
ATAGACAGGCATGGAGTTACTGTTCCACCTAGGTGCAAACACTTTCAGACATAGACAACA
GTTTCCACAATGCAAGCTATAGCAGTACAAGCTGCACCATCTATAGACTGTTGTTTGTAA
TCCAAATATGTCAATAGACTAACTGACTAACTTTGTCCACATAAAATCCACACTGTATTT
TCCAAATCTTACACCCTTGCAAACTTGCACTGGTCTACTTAAATCAATATGCTTCACAAT
AATAGGTCAATAGACTAACTTTGTCCACATAATATCCAGAGTGTATTTTCCAAATCCTAT
AGCCTTGCAAACTTGCACTGGTTTACTTAAATAAATATGCTTTACAATAATAGGTATCTA
TGTTAACCATTTCATAAGACACCGACGGAATTATTGATTACTTATTTTAGCTTGCCATCT
CATATGGAACATCAGCTAACTAAACAAAATGTGAATAACATGTGATCACCTTCTCATTAT
CAACATGTCCATGTGAAAGTACATCTGTTGCATAGGCCCTATAGAATGTCTTTGGATCAC
TAGCCCTCCTATCATGATCTTGCTCTCCCGCTAGACAATCCATGCAGAAGACAAAAATAA
GAATCCATAAGGATAGACCACCTTATCAACATACAAACAACAACAAAGGCTCATTAACAT
ATGAATTCAAAGATCTTCACTAACTTACCTAATGAAATAGGTCCAAGCCCACGTGCAAAT
CGATCGCCTTGAGGGTGCTTGCTCAGTACAGTTAGCAGGTTATTAAATGCAAGGACGCAC
TTTACTTCTTCAATAACCTGTGTGGGGCTATTGCTGCACACAGTGATAGTATGGTTTAGT
CGTGAGGTAAAAATTTGAGCATGTTCTGTATTGACAAGATCCAAAAAATTAAGCGTAGCA
AGATTCAGAGGGTTTATACTTCTTGACAGAGATTCATGTATTTTCTAATAATTGAACAAC
GAAAACAAACGGGATTTATTAAGTATTTCTCAAACTTCCTTGGAGTGCAGATAGCTCAGT
TTTTCATAATAGTACAAAAATATTATTTGCTAGTTAAAGCAGATCAATCCACCAAACATA
TCCTAGAGGGAGCCAATATGGCACTGCTGATTTTCAAGTTACCAAGGCCATCAGGAAGAG
GTAAACATATGTGGTTGAATAATGCCAAACAACAAACAACCATCGGGATTGAAGCAACCT
ACTCTTGCTACTTCTCGCAATGAAACTACAGTGTGATGCTTACTTTGGTCTGAAGCGATT
GAATGGTACAAGTCCTTTAAGAATCTCATTTAGTGCACACAGTGAGCCCTACAAATTATA
TGGACTGTCAGCTTGAGCTTTGTGTATAGAAGCAATGCACATAGCCTTCATAGTTCATAT
TACATAGGCAAACAATTACCTGGGATGCTATCAATAACGGGAAGGCATCCTCAAATGTGA
GCTTGTAACCTTGAGCATACTCGTGATTAGTCTGCCTGATTTCGGTCTCTCCAAAGGACA
TGAAAAA