| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_86745
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_79744 |
3 |
3141 bp |
MLOC_79744.2 |
Available |
Available |
LOC_Os04g58960.1, FRAME:+2, EVALUE:4e-91, 13104.m06211 protein regulator of chromosome condensation, putative, expressed |
| MLOC_79745 |
1 |
1420 bp |
None |
Available |
Available |
LOC_Os02g55980.1, FRAME:-3, EVALUE:8e-35, 13102.m06427 protein vacuolar protein sorting 55 family protein, putative, expressed |
CDS Structure of MLOC_79744
CDS Structure of MLOC_79745
Contig Sequence (5975 bp)
>contig_86745 5975 assembly3_WGSMorex_rbca.fasta
TGTGCAGGCTCCTGTGATACTCCTCCGCCGGATCGATACCTTGGTTCTNNNNNNNNNNNN
NATACTTACCTCTGCTGTGCTACATCACCCTCTCCGCTTCGAAGGAACACCAACGCAGAA
GGATTCCTGGTGTCGTCAACGTGTCCATTTCTGGCGCAACTGAAAGGTCTTTTGTGCAGT
AGCATAACGGACATCATCGCCCGCACGACCGAGTCCAGCACTCGGACGCGGTCACCCCTG
CGCGTCCATCGCGGCTGCTAACCAACACAAGCACGCACCCCGTAAGACGCACACACACGC
CCTAGCACACCCAGGCCAAGCCCTGTCACGCTCCCGGTGCACGCACACACGACGCATCCC
CGACGCAACAAACCGGCACGCACACGCCTCCGCTCAGCCGCGGCTTATTGCACCAACATG
ATATGCTATCCATCATAGCCTCGAACTACTACAGAACAGTCTTGCTATGTCTCAGTCGAC
TGATACTTAACGAAGTCTTAGTCGATGTTATATCTGTGAGATCTTACATTAAGATCCATG
CAAAAATTACTTTTTTTTTCTCTATGGCATGTTGTGTCACTTGATTGAGACTTTATTAAA
TCTCAGTCGAATGAGACCTAGCTACATCCATTGAAGAAAGGTTTGATTGAGTGCGTCGGC
AACGGGAGAAATATTCGTATATGGAGAGACACCTGGCTACCACGCCGGGCTTTTTCATAC
AGACCCGGTGTCACCAAGGGGCACATCCGCACATGCCGCTTGCGGCTGGAAGATGGAACA
TGGAGCTTTTGCAGCGCCACTTCCTCCCTGTGGACGTCGTCATTATCATGAAGATCAAGC
CTTCCAAACGTGGTCTCGATGATGTCCTTGCATGGGCACCGGACACCAAGGACGTGTTCA
CTGCACGAAGCGCTTACCGCCTCGCCCTTGAGGACAGGAATCGCACGTCGGCCTGTGCCA
CGAGCAGGGCACCGGACGGCACCCGTGCTGTGTGGGAAGCATTGTGGGGGTGCCCTGCCC
CTTTCAAAGGTACGCATGTTTGTTAGTGATAATCTTGTTTAGTAATAGATTAGTTAGTTT
TCAGTTCAATTGTTTAGTTCGCCTAGGAGGTGTCTTGGCAGTATGCATGCATGTTGAGTT
CGGTTTGGACTTGTACATGGTGTGTGCATCGATAGTAGAAGATATCAGCTACGTGTTAGC
CGTGTCCTAGTGTTAGACGTGTCCTAGTTAGATAGGAGTTGCCAGCAGTCCGGTTTGGAC
TCCAAATCAAGTTTTACGTAGTCTATGAGTCGGTTGTTCGTGTATATATATACTAGTAAA
AGTGCCCGTGCGTTGCACCGGGTTAGATTGTCGATATTTGAATCATGAATTTTGTATTTG
TAAAGTCCCGCGCTCACCCTCCGTCGGCACATCTCTACTTCAGCCCCGCACCGCCACATC
GCAAGTGCTAGTAGAGATGCAAACATATGCACTTTCATTCAAATGGAGTGAAACTCCATA
CAGGTTGGTCATATGCTTACCAGAAGGCGATCATCAAAACTTTACTTATTTAATCTCTGC
AAAAAACATGAAGCAATTGTGTATATCGACCAAAGAAACACCATTATGATAATGATGACT
GCTCAGTCGGTTTTGAAGAATATTTTCCAGTTCGTCCTAGAAACATATGGACTGAGTTAT
CCAGCAGATATTTAATAGCATGAAGCATGTGAACACCTATGTGCCGAATCTCATTGTACA
ATCCCACTCGCAGTAGTCCTCCCCCATCATGTTTATTAACCGATCACCAGGGCAAGGCAA
GGCATGGCAATCCGGCCTTCTACAACTTGGAGGGCTTGGGAAAGATGTGTGGCGTGAACT
TCTGCGCGGTGCTGATGCTCCCCTTGATCTTCAGCTTATCCATCATTCTCATTGAACATG
ATCGATGGAGAATCTGAGCCCAGGAAAAATATGAGCGGCATGGGTAGTATGAGGTACATC
AGAACTGCAAAAAATGTCATGCATCATTTGCATGATACTTGTTTAAAATTATCAGATAAA
TGTTTGGAAGTGCCTCTAACCTGTTAACATTGGCCACCAGTTGTTATAAAGAGCACATGC
CTGAAGAAGACAGAGTTGCAGAGATTTAGGCAACATTGAGAAAAGGATTAAAAAAACTGG
CGCTGAGATGTTAAATGTCCAAGCTTACCAAAATCTGCAATACAATTCCTGCAGAGACTA
ATATTGCCAGGGCGGCAAGTCTTCCACTATGCAAACATGTCCTCATAGTGCGTGACAGTG
CCATCGTTCCCTTTGATGTTCTTCAGATAAAGGTACTGGAACGAGTAAAAGGCGGACAAT
CAAAAACATTGCGGGCATAGTTGAGTTAAAAAAACAGTGTGATCATGAACAACCGACGGC
TCCGCATGACTGAATCACAATCATTTGACTTGTTACTGAGTGCACATAAATAAACTATCT
TCTGGATACTATTAAGGATGCTCTAAACCTGTCTAAATACACAGTGTCACAATCTATATT
TTCATTGTGCCTCGGACTAATATCAGGGTCTGATGAAAACGCATTCTCCCCTGATGCAAC
CACTAATATCCTTGTACCAAAGCCCCTAGATTCAAATGTAATGCTTGATGTCTCAGTTAT
GTGGCTTGTGGTGTGAAGCATGCTGCACTTATCACAAGACAGGCAGAGGTATTTACATGG
CGAGAAGAATGGAGTGGGCGGCTTGGTCACGGGGTGTACCAAAGCCCCTAGAGTCAAATG
TAATGCTTGATGTCAGTTATGTGGCTTGTGGTGTGAAGCATGCTGCACTTATCACAAGAC
AGGCAGAGGTATTTACATGGGGAGAAGAATGCAGTGGGCGGCTTGGTCACGGGGCTGATA
CGAGCATTTTTCAACCACGTCTACTTGAGTCATTGTCGACCTGCAATGTAGAAATAATGG
TTTGTGGCGAATTCCATACTTGTGTTGTTACAAGAACAGGTGACCTTTACACCTGGGGAG
ATGGTACCCACAATGCCGACCTCCTTGGTCATGGTAGTACTGTGAGTCACTGGATACCCA
AAAGGGTTTCAGGTCCACTGGAAGCCTTCAGGTGTCGATTGTTTCTTGCGGAACATGGCA
TACAACTTTGATAACTACTTCTGGACTGTTGTACACATTCGGCGATGGCACATTTGGCGC
CTTAGGTCATGGGAATCGAGAAACTATCTCGCATCCAAAGGAAGTGGAGTCTTTGAAGGG
TTTGAGGACAATTTCTGTTTTATGTTTTATGAAACGCTTATGAATTCATAATTTTTAGAA
GCTGCTACTCCATGATGAGGAATTGGGGATGCAGATTGTAGCCTGTAACAGATGTATTTT
ATTTATTTATTCAGCCAAGTGGTATGCTGGAATAAAAATGTAAGTCTCTATAGTCAACCC
CTAACCAAAAAGAAGACGGAAGCACTTACTCAGCACTGATTAAATTTAAAGAGTTATACA
TGTATTTTTTATATAATCTACAGTATAAACTCTTTCCATTTGCCCATTTTCCTGATTTAT
GCACTTTCCCCATGGTATAATAAGAAACAAAATCCATTTATTGGCTTATTATGATCAAAA
CTTAGAGTATATGCGCCAATGTGAGTGGTCTTATAGAGTTGGAATGTTTTGCTTCACTGT
AATTGCTTTACTGAATCTATGGACTAACAAAAATCCTATTTCTTGTGTCAGGCAGCTCTC
ACATCCCTCCCAGTCTCCTTTGATTTGACACAGGCGGATCATCTGTCTCAGTGTATTTGA
CGTGAAAGTATCACCAGTAGCTGCAGGCTTCACCATACACTTTCCCAGCACATGCTTGTA
TCGCGTACTGCCAATTCCCTGACCCCGATGAAGATATACTGCTGGAGGAAATCAGAAAAA
TCAAATAGTGGTAGGTGTGATACATACCTCTGGTGTAGCCGCAGCAGGCGACATTGGCCT
AGAAAGCATGGGAATACACAAGTTACTATTTCACATAGTATCAAGGTTTCGATCATCATG
TTCAGTTCCATAAATACTCCATAGAATACATACCCAACTGGCCAACTCCATATGTTCCAT
AAATACTCCATGTGCATAGCACTCAAATTTTAGCTTGATGTGATCAGTACTAACACCACA
TAGCTTAAAAGTAGGAGCAAGTATATCAGGTATAAAACATGCAGTTGAACTAAGGTGCAC
TTGTACCTTTTGGCAAGACTTTGAGGCCTTCATAGTGTCAAGAGCTTCATCAGTGTCAAT
GCTGTGATGAAGAATATGTACCTTGAAAATTGAACAACCAGACAACAGATCCCATTGCCG
CTCCAATGCAGGGTATGTAGGAAGAAAAACCAAAATACTCTTTTTCAGTGTCTTGTTCAC
TTTCATGTATGTGCAACAATAACTTGTTGATGAGTTGATGCACGCCAGGATTAAGATAAG
CTTCTGCCTTGCAATCTAGTCCAGGGCAATACTTCGTCTGGAGTGATTCAGTTTCAGAAT
CCATCTTCAGAATATCAACAATCTGAACATTATTCCATTGTTATCCGCGCTTTCCACAGG
CAAAAGACCACCAATGACGATGGGGACGGCCATTCCGCGAGTCAAGCGTCACGCACCGCC
GCAGGGAGCGCCTATGTGTGGCACCGCACTGCCAATGAACCCTGTTGCCGTCGTGGTGGC
CGCTCCTGCTCCCACGCCGCCCCAGCACGCGCAGGGCGCGCCCGGGAACGCCAGGACGCA
ACCGGCAAGGGGCCGAAGTGGAGGTACTTCGGTCTCCATTTGCTTGGCTGCTGCGGCGGG
ACGCCGACGGCAAGGGGCGGCGCGGCGGATCACCGGAGATAGGATCCCGCCGTGGAGGAC
GGGGTGGATAAGGTATGGTGTTTTTCTTTACTGAAACGTTTTTTTTTGTTCACTTAAATC
TGGACGGCGGGTTGAATATCCAAAAACAAAAGGGCTTTTGTGCAAAACCACCAGCGACGG
ACGAAAGAAACGATCCGTGCTTTATTATTAGGGGAGATGTGTACGAGGGGCTTCGTCTTT
GTACCTTGAGTTAAGATTAAAGAAGAAAATAAAGAGGGAAAATTAAGGCATGACAAGGGT
CCTTGGCTATAAGATTTTGTGTGCGCGTGTTTATCGTGATTTAATGTAATGGATCCTGAG
GGTTGAGTTTCAACAATGTTCCCATGACGTCTCGTCACAAATTGTCCGGCAACTTTGAAA
AATAAGGCAAAGATACATTGAGGAATCTGATATATGTATGATCTGCGCGGTGCAACGTGA
GGATACTTTCCTAGTTTTTTGCAGATGCCCGATGGTTCAGGGACTTTGGCGTTCGATGAG
CGAGCACTGGCGCGGATGCCCAAGCTGGAAGATGTCAGAAACACTTGGCCGGAGTGGCTG
CTGCAGCTGCTGAACCTGCAGTGCAAGGAGGAGGAACGCCTCCCTGTATTGATGAGTGAT
GACGCTATGGAGGACATGGCATGTCCATAACGAGCTGACACACCATAAGCCGGCGACTCC
CATTGCAGTGTCTAGTCGATTCCTGAATAGCTATATTGTCTCGCTGCTTTGCCTACAGCA
GAGTCCTGAAGAAAACTTGGAGAAGGGGAAGATGTCGGTCAGCCAGGACAGCCGTAGCCG
TGCGTGTAGGCCTACACCGGCAAGCGGCGCAAAACCGAGCTTGTGCTGGACCCGGCCGCC
GTCGGGCTTTTTTTTTAAAAAAGGAAGATAACCCCCGGCAGCATGTGCTTACCAGTACTA
CAGTATCAGGCTGCAGAATTTTTTAGTTAGATGGAATTAATTGAGGGCAACAATTTTTTT
TATCCTCATAAATATGTTTACTCTAGATATTGCACTATGAACTACATANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTAGTCTTCTAGTGTAATC
TCTAAAAGGTCTTATATTTTAAAACAGAGGGAGTA
