Contig Data
morexGenes
Links



Map Locations of contig_8668 (4164 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_8668

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79728 2 2138 bp MLOC_79728.1 Available Available LOC_Os04g43800.1, FRAME:+1, EVALUE:0.0, 13104.m04357 protein phenylalanine ammonia-lyase, putative, expressed





CDS Structure of MLOC_79728






Contig Sequence (4164 bp)

>contig_8668 4164 assembly3_WGSMorex_rbca.fasta
ACCAAGGAGGGCGGCGCTCTGCAGAGAGAGCTCATCCGGTACGAATTAAACTTCAGAACC
AGTTCTACTTCTTGTTAAGCATTTCTGTTAGTTATGTGTACCAGACTATGAATTGAGTTA
TAGAAGTCTTATTTTTTCGTGTATCGGTTGTGTGTTCAGATTCCTTAACGCCGGAGCCTT
CGGCACCGGCACCGATGGCCACGTTCTGCCTGCCGCGACGACGAGGGCGGCGATGCTCGT
CCGAGTAAATACCTTGCTGCAGGGATATTCAGGCATTCGCTTTGAGATCCTGGAGACGAT
TGCCACACTTCTCAATGCCAACGTGACACCATGCCTGCCGCTCCGGGGCACGATCACCGC
GTCTGGTGACCTCGTACCGCTTTCGTACATTGCGGGCCTGGTCACCGGCCGCCCAAACTC
CGTGGCAACCGCTCCAGATGGCACGAAGGTTAATGCCGCCGAGGCATTTAAGATCGCCGG
CATCCAGCATGGCTTCTTCGAGCTGCAGCCCAAGGAAGGCCTTGCCATGGTGAATGGCAC
GGCGGTAGGCTCTGGGCTTGCATCCATGGTGCTTTTCGAGGCTAACGTCCTTAGCCTCCT
TGCCGAGGTCCTGTCGGCCGTCTTCTGCGAGGTGATGAATGGCAAGCCGGAGTACACCGA
TCACTTGACCCACAAGCTGAAGCACCACCCTGGACAGATCGAGGCTGCCGCCATCATGGA
GCACATTCTTGAAGGCAGCTCCTACATGATGCTAGCAAAGAAGCTCGGTGAGCTTGACCC
ATTGATGAAGCCAAAGCAAGATAGGTATGCACTCCGCACATCGCCTCAGTGGCTTGGCCC
TCAGATTGAGGTCATCCGTGCTGCCACCAAGTCGATCGAGCGGGAGATCAACTCCGTCAA
TGACAACCCACTCATCGACGTTTCTCGTGGCAAGGCTATCCACGGTGGCAACTTCCAGGG
CACACCTATTGGTGTGTCCATGGACAACACCAGGCTTGCCATTGCTGCGATCGGTAAACT
CATGTTTGCCCAGTTCTCAGAGCTAGTGAATGACTTCTACAACAACGGTCTGCCATCCAA
CCTCTCTGGCGGGCGCAACCCAAGTTTGGACTATGGCTTCAAGGGTGCTGAGATTGCCAT
GGCGTCATACTGTTCCGAGCTTCAGTTCCTGGGCAACCCTGTGACCAACCATGTCCAGAG
CGCAGAGCAGCACAACCAAGATGTCAACTCTCTTGGCCTCATCTCCTCAAGGAAGACTGC
CGAGGCCATTGACATACTCAAGCTCATGTCCTCGACATTTTTGGTCGCATTGTGCCAGGC
TATCGACCTCCGCCACCTCGAGGAGAATGTCAAGAATGCTGTAAAGAGCTGTGTGAAGAC
GGTGGCCAGGAAGACACTAAGCACTGATAGCAATGGCCATCTCCACAACGCACGTTTCTG
TGAGAAGGACCTTCTGCTCACAATTGACCGTGAGGCGGTATTCGCATACGCAGATGACCC
ATGCAGCGCGAACTACCCACTCATGCAGAAGATGCGTGCAGTGCTTGTGGAGCACGCCTT
GGCCAATGGTGAGGCCGAGCACGACGTAGAGACGTCAGTGTTTGCCAAGCTTGCCACGTT
CGAGCAGGAGCTCCGTGCAGTGCTGCCAAAGGAGGTCGAGGCCGCCAGGAGCGCCGTGGA
GAATGGCACTGCCGCACAGCAAAACCGTATCACGGAATGCCGGTCGTACCCGCTCTACCG
GTTCGTGCGCAAGGAGCTTGGAACAGAATACTTGACTGGAGAGAAGACGAGGTCTCCTGG
GGAAGAAGTGGACAAGGTGTTCGTTGCCATGAACCAAGGCAAGCACATCGACGCACTTCT
TGAGTGCCTCAAGGAGTGGAATGGTGAGCCCCTGCCTATTTGCTGAACAGAGGATTGAGA
AATGGAAGGGTAGTGTGCTCAGATTTCTGAAAGATCCAGTGATAATACCGTTTTTTCTTC
CAGAGCTGGCAATGCATTGCTAAAGATTGCAATTGCGTGACTTGGTAGTGTTGGGTAGCC
AGTAGAACTTTTCTTATTTAAGTTATAAAAGGGTACAGTGTGTGATAAGTTTGATGATAA
ATATACTGGTTCAAGAAAGTAAAACTCGTGCCTTCTAGAGCTGCCAGTGGCAACTCCGTA
CTTGCTAGTTCTATCAACATTGTACGAGGCCTTCTCTGAATTCGCAATCTTGTATCTAGT
TTTTGCAGTTTCAGTAACTAAATTCAGTCTAGACTTTAGTTCATCCAGTGTTCCGACTAT
TAAAGTAAGACACAAGAGGATATGTCACATAAATGAAGATCCTTACACCAAAACCACAGT
TAGTTTACTGCTCATCTCAAGATGTTCATAACCAAGGCACGTATACATAAAGTTTCTCTG
CGCTTCTGAAGATCGCACTATTTTTCTGTTCTAATCATACATAGGCAGGAAATACATATG
AACATTGCGCGACTTTGTATTCTACTCCTTTTGGTGTTCTTCAATCTACACGTATCGAGA
GATCTGCGTTTACATTGACTGTCCACGAGGCGTGTATGTATGTCCCTCTGCACCGGCCAC
CATATCCTGCCAACTAACGCGCCGCATTTTATCACTACCCTGGGCGGCTTGCGAATTTTA
TCACTACCCTGGGCGGCTTGCGAATCGATTTATGTGTGCTTTCTTCTTCATACATGCATG
CATGTATATAATAGTGTCATCGGATTTTTTTTAAATGATCAAAATTTAAAAACTTTTATC
TCTTAAACCGTTAACTCGATCGATGATCCATTTTTACAGTTGAGTTTGTTTCGACGAAAT
CTTCAAAAACTAGATCCCACATCGACATGTTTCGACAACTTTTTTTTTGCTCGTACTTAN
NNNNNNNNTTGCACTTACTTGTCATATTAGTAAATACTTACTAATCTGATAAAAAATAAC
TTAATCGCCATATTTTTAAAAATTGCGTATAATATGACATATCGACATAATCAAACTCGT
AAGCACAAACAATTTTTTCAGGCGATTACACGCAAAAATATGACAACTCAACATATTTAA
AACCGGTGACCACAAGAATATTTGATCACCGTTTGTAAATATGACAACTCGACATAGTTA
AACTAACAAGTACATAAAATAGTTTCTGGCAAAGTTGTATGTAAATATGACAAGTTGGTA
TATTTTAAATTGACAAACACAACCTATAACATGCTTTTATACCATGTATAATGAAATCTG
CTAGAAGGCTTTTTTGTAGGAAACAACATTAAAAAGTGACAATCAAGTTATTTTTTTCAC
GCAAATAAGTCGTTAATAATATGACAAGTGGGTCCAAATATGACAAGTATGAACGAAAAA
CAATAGTTGACGGAACATATCAACATGGGATCTAGTTTCGAAGAACTCGTCGCGAGAAAG
TCAATGGTGAAAGCGGATCATCGATTGAATTAACGATTTTGTAGATAAATCTGTTTGAAT
TTCAAACATGAAAAGGAATCTTGCGTGCGGTGTTGTATGTTTTCTAGTCACATCGATTGA
ATTAACGATTTTATAGATAAATCTGTTTGAATTTCAAACATGAAAAGGAATCTTGCGTGC
GGTGTTGTATGTTTTTTAGTCACCGGATAACCCATCCATGTGGTCCATCGGACAACTTTT
TTGGGGCCAGAGAGTGATTGGCGGGAGGTGCCACACTTAAAATGCATTAGTTAGGAGATT
AGTTGACCGCCATACGGTAAGTCCATATGCGGCGCCGTTACGGAGTGACGTTCAACAAAC
TTTATGACATCACATTCAACCCAACAAACATATATAACACGCAACCCTACAAGATAGCAC
AAGAAAAGGCAGGAGTGTGATCGTTCATTTCGTGAACTACTTGTTGTAGCTTGACGAGAA
CCCCATCCATTTCAGCCTGATGCTTCTCCTTCCACAGTTTCCTCAATACTGCAACAGAAT
GATAATTTTGTAAATATCATCGGCACGACAACGGCGAAGCTTGGCCTCAAATAACATCTC
GCCTCTTTCGCTGACAATAGCCCGATTAAGAAGCGGAGCAACAGAGCTGCTCCCTCCCCT
CCCGCGACGCGCCCGTCCGCGCCGGGGGAAGGGGGGCTGCCCTAGACGCCCTTCACTTCG
AACCGCCTCCCTTCCCTCCTCCCC