Contig Data
morexGenes
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Map Locations of contig_8613 (3330 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_8613

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79641 2 1235 bp AK367241 Available Available None





CDS Structure of MLOC_79641






Contig Sequence (3330 bp)

>contig_8613 3330 assembly3_WGSMorex_rbca.fasta
AAAAATTTTGGGACGGAGGAAGTAGTGACGAACCAAGCGGCGGCATGGCGGACGGCCGGC
CCGTCGGTCCAAGAACATTGACAGGGTGGTGCTGACTTCATGGGCTTGATAATAAGCTTG
GTGGAGATGGTCTATGTAGGCGCTGGAGTCGACTGGTTCATAAGAACTATACTCAATGAC
AAATTAAGCTTGTTTGTAGAAGTGCAACTATTTCTACTCTACCCCTCCTAGCCATTGTAT
GATCTAAAATTTTCGAGATTGTACAATGTGATTATGGACGAGTCTTCGACGGTGATGCAC
CGTCATATTTGTATTAATGATGTTTATTTATATATGTTCCCTGTTAAATCCTCAACAACG
CAAGTCACATCCAGCCAGATGAGAAACATACACTACCCTCTCTCCGTCGTGAGATTTGCC
CGTGTGTCATGCAATCGTCGCATGTCCCAGTGATGTTTTTGTTTTTTTGTTTTTGCTTTC
CATGTAAAGACATTACAATTTACAAAGTAGTTTTTGTAAGAACAATTTACAAAGAAGCTT
ACTGTTGAAGTTGCAGCCAGCTCGTTTGCTACGTGCGTGAGCTACTCCACCAGAAGAATC
CATATATCCAGCTGTCTGCTTGATTAACTTGTGTATTACTTCCTCGTCATAGCAATCGAT
CTACGTGCGGTTGAAGTTGGACGTGTGGGTGACGCATCCGCCACCATTATTGTCACTTCT
TCATCACACGGCTCATACTTGGGCGGCGCGCCGACTACGAGTAGCTTTTTTATTTCGGAG
CGAGAAGTTGTAGTCGGTTCGACACCTCCCGTCGTTACGCGGATGGCCGGGGTGTGCAAC
GTGCGGGTCCAGGAAGGAAGTTGTTGTTGGGCATTACATGAGGTGGCGTTTTAGAGAGGC
GGTAAGAGAGATTTGTGGCACCGATGTAGTCGGGCCACACAGGTGGTGGTTGTGGACGCG
CTCCACTCCCACATGTTTCACCTCTTCTTCGACCTGGTGGTTCCCTGATTGATCAGGTTG
AACAAGTTATTGGCGACGATCCGAGGTTATCGATCGGTTCATCATACATAGACATCAATG
GCCTCTTGAGCGTCTTGTTTTTTGGACGGCGACCCCGGTGGTGGGAGTTGCAAAGCTCGT
GGGTGCAGCTTGCAACTCAGGTCCGGATAGCCATGCCCGGGGAAAGTTCCAGGTGATACA
GGGCCTCACATGCTACCATGATATGGCTCTTGGACCCTTGGATCTCATATACGACGACAT
CTGAGGAGTTGTTATATCTGCACACCATTTTGAGACTCATTAGCTTTTGCAAAATGTTCA
AGAGCTCCCATGAACCATTGGATCTGAAGTCCAGCGGCTCCCGAGAGCCTGTATCAGGCA
TGACCTTAGCCTCGGTATCACCTGATGTTTCCCCGACATGGCCTGGTGCATGCTTTGGTG
ACCGGCATACCGATGTCCGTTGGCGGTGTGCAGTTGTGGTCTATGTGTCTGGAAACACTT
GGGGTGAAGGCGGAATATGCTTGCGAGGGTGAAAACCATGATTGGCTTTGGTCAGACAAA
CAAAAGCGCCGCATTTGGACGTCCCAACCTTCTTGAAATCTTAATTCCGGTTGCTCCTTG
TCCTTCGTCATGCTTCAAATGAAAATCTTGATCCGGAGACGTGTCCTTCTTAAAGGCTTT
GTCTAGGAGGTCCGGGTTCGTTCTCCACCCCTTCGGGGCGTCTTTCGTCAGAAAGGCATA
GTGTCATTCTCTGTACTTGAAGTTGTTTGTGGTGTTGTGCCAGTAATGCTACACATAGGG
AGTTTTACAACAGATTTACAGATTGCTTATCACACTGATTGGCCGAGGATTGATTAAGGC
ATTATTGGGCTCACTGGTGAAATTCAGAGGGGCAATTAGAAGAGCTTACAGTACTCAGCT
CGTAAAACCCTTAAAACTTGTCCGTACGTTAAACATTATTGGTGTTGTGGTTGTTCGTTT
TTGGCACATACTGTATATATCTTGCCTTGGACAAGCATGTGGGTCTGCCGCGTGCGTCGA
CTTGTATGTCGTGTGTCACTTTATCTGTGAACTAGGACAAAAGCCTTTTTCCATACATCC
AAACAAAGCACATGCCCAAATTCCCAACCACGAAAGAAGGAAATCCAAACCGACACGCAG
GAAAAGCAGGATTACAGTACCTATGAACCAGGGGGTTATTGGCTAAAGGTCTCTCTCGAA
GGATTTGGCTACTGTGGTAGCTTGTTGATCTTGCAGTACTTGTAGTCCTTGAACTTCTTG
GCCTTGTACTTGGCCGGGAACTCGTCGGTGACGAGCTGCGGGTGCGGCCCGACGACGTGC
TCCGGCGGCGGCTCCACGAACACCGGCCAGGACATCCGCGTCTTCTCCCGGCTCACCGTC
GTCCGGTGCAGCACGGCCTTGTACCTCCCGTTGCTCATGATCTATCACACACAAATTAGC
CTCCGCGTTAAACGGTGGAACAGTTGACGAGACGGCGCAAGTCGATCGGGAGCGTACGTT
CCAGCACTTGCCTCGATCTGGTCGCCGACGTGGATGATGAGGCCGCCGGGCACGTACTCG
ACGTTGTACCAGTGCCCGTCCTTGAACACCTGGAGCCCCTGCACCTCGTTGGGCAGGAGG
ACGGTGAGCGTGCTCAGGTCGGTGTGCGGCGCCAGGCCGAGCGCGAGCTCCGGCTGCGGG
CACGGCGGGTAGAAGTTGATCTTCTGGAGGAGCACCACGTCGTCGCCGCCGAACGCCTCC
GCCATGGCGCCCCCCTCCAGCCCCAGCTCCGCCGAGAGCCGCTCGAACAGCTCGCGCGTG
AGCCGCTGCATGTGGCCGCAGTAGGCCTCGTTGGCCTGCCTGTAACCCCTTGGGTTCTCC
GGCCAGGCGGCGTGGTTCACGGCGGCCGGCGGCGCGACGTTGTGGAAGAGGAAGTCGGCC
CAGGCCTTCTTGCCCTCGAGGCCGCGCCTCCGCAGCGTGGAGCCGTAGCCCTCGGTCCTG
CCCTCGGCCGGGTCCATGGCGTACCGCTGCTTCTCCTCCTGTGGCAGCGCGAAGAACTCG
CGGCCCACGCGCTGCAGCTCGGCCACGGCCTCGGCCGGCACGCCGTGGCCCACCACCTGG
AAGATGCCCCACTCCGCCGCGGCCTCCGCCATGCGGCGCCCGGCGTCCGGCGAGGACATG
TCGACCACGGGGATCTGCGGCGGCGCGGCCCCGCGGGACGTGGTGGCGCGCGGCTGCTCG
TGTTCGGGCCACACGAACGCGGGCGGGAGCGCGCCCCGCGAGGGCGGCAGCGCCCGCGCG
CGCTGGCGCCCCGCACTCGACTCCCCGCAG