Contig Data
morexGenes
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Map Locations of contig_85721 (4639 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_85721

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79574 2 915 bp MLOC_79574.1 Available Available LOC_Os03g49230.1, FRAME:-2, EVALUE:6e-109, 13103.m05330 protein acetyltransferase, GNAT family, putative, expressed





CDS Structure of MLOC_79574






Contig Sequence (4639 bp)

>contig_85721 4639 assembly3_WGSMorex_rbca.fasta
ATATTTTAAAGTGTACATTCAATCATTTTGCTCCGTATGTAGACCCCTAGTGAAATTGCT
TAAAAGACTTATATTTAGAAACAGAGGGAGTAATTCATAGTGCAATCTCTAAAAGGTGTT
ATATTTAGGAACGGGGAGAGTAGATGGCAAGGTTTCCGACATGCTAAATGACGTACAATC
CCAACAATCCGACAAGAATAGAAGCTCGTAAAACAGGATACACCTATGATATTTTGGGGA
AAGAAACTATAAGATAACTCTACAATTGCGTTTGTGGTTAACTCAATTGATTACAACCAA
TGTTAGGATAAAGTGTCGAAGCCAGATATCGGAGGCATGGAAGACTAGCTAAAAAGATCA
TACATGAAGCCAAGATTTGCGCCGGGCATACTGTCATAATAACTGACTGGTATATGGGAA
CTATATACCCTTGTTAACATTGAACTGGTGGTGCCAAGTCAGGCATCAAACCATCAGACC
GGGTATCCAATGTTCCCACACAAGTCTAGTGGAGTTGGGTGATGAAATCCCAAGCACATA
GACGAGTCGCTTCGCCCCGTATTGTTGACCAACGATCATCAATGCATATCACAGATTTTG
GCCCAGAATTTGACCCCCTAGACACAACATGCACTTTATAACCATTTAGCCGCTAACAAG
TCGAAACCTCAGAGGACAAATTTTTGACCTTTTGCCCTAACAAATTCCGGAATTAACCTT
ATCATTATTTTTAATCTCACCTCTTTTAGTGACGCCAACGTCCTTAGCTTTTTGTTTACA
TGGAAGACGCCAAGGTCACTGACGTCTGGTACAGGCCGAACGCCTCCGTGGCGATGACGC
CGCGCCTCTGTACCAGAGGTTGCGGGTTTGATTCCCGCCGCAGCCCTGTATTTTATTTTT
TTTCCTTTACAGTTCGATAGAAACTTTCGAAAAAATCCGATTTGATGTTAAACATTTACA
AACGAAAAAATAATCATATGATTTTTTTAATGCAAAATAAAAGACATATATATGATTAAG
TATATAGTAAGGAGGTTTTCTGCAAAAAAGACTAGCCATGACGGCACCTGACACGTGGGC
ATTTAGAAAGGCATTTGGGTTCACCGAAGAAATTTTCGGATTTTAGCCCTTTAATTAAAC
ATGAGGCTTGAGTTCCCATCATTTCAATATTTATTTTAATTAAACATGATGACATGCCAT
GCTTAGCTATTCTACTCCCTCCGTTTCTAAATACAAGTCTTTTTAAAGGTTTCACTAAAG
CACTACATACAAAGTCTTTTTAAAGGTTTCACTAAAGCACTACATACAGATGTATATAGA
CATACTTTAAAATATAGATTCACTTATTTTGTTTCATATGTAAGCCCTTAACGAAATCTC
TAAAAAGACTTATATTTAGGAATGTGCAGTAGTAGATCATCAGAAGCTAGGGCTGTGACA
CGTAAGTTACGATGCTCTGAAGAGGTGGGGCTTCGACCAAGTAGCACAACTGCAGCCAGT
ACTTGCAGATGTTAGAATTTCGTCATAGGCAAGGTCAAACGAATTTTAACTTGCTAATTC
CAAAATAACATTGACATGCCAGGAAAAAAAACAGCAAGCCAAAAAACATTGGCGTTCCAC
TTCAGCATGCACTAGTTTGATCATCAGTGCCCACCTTGAAGTGCCTCAAATCTTAACAGG
AATGTGCAAATAGAAAATTCACGATCACTCATTCAACAAGACTAGAGACAATAGCTTGTC
GAGCTGCCATATAAGTCGTGCAGATCAACGAGGACACAACCATCAAGAGTGATGGTTAGA
ATTTAGCATGTCAGTCGTATTCAAGTTCGTCCGGTGTTATTGGTCTCTTGAGTGGTATGA
TGGACTTCTTGTCAACATCTTGTGATAGCGCCTTTCTCATATCTAATAAGAATATAAAAA
AAAGGTGAGCAGTAGCACCGGAGCAGTTAATCCGAGTATAAGACGACATAAGTATGGCAT
TCCAAGTACTTACCAAGGCCATCTTCTTCCCCTGAGTAGTACCGAAGCACCCTTCGATAA
ACCACATAGCCCAACTACAAGAACAACGAGCATAATTAGGTACGTTTGCTGAGGATATTT
GCATATCGTACTAAAATGTATACACTATGATGCAAGCTTCACATACTGTTTCTTGGTTTC
GTTGCCAAACATTATAAAAGTTTCTGTCTAGCGAAGCAGAAGAAATTACTAGTTTGAAGA
ATTGAGGATTAACTAATAGGTAATCCGTATTGACATATACAGCAACAGTATGCTAGCTAG
TGATCATGAAGTTCGTAGGTGTACCTTTTCATACATCCTTATCGCCGGCATGTTGGATGC
CCTTACAAAGAGATCCACAAAATAGGCCTTATCCCTGAACAGAAGAAATTGCCTTAGTGT
GATATGGAGTAATGCCAGTGAGATAATATCTACTCGTAGTATACAAGATTCAAAGATTAC
ACCAGTTTTGGATCCAAACGGTTGGTATTAAATGGCACATGAGTAGAGAGAGGAGTGAAC
TGCAGTACGGCATCAATAGGGCTGATATATTAAATTCAATCACCCAATTCTAAGATGTGT
TAAGAGGTTGTGGTTCCTGGTAGGAGGAAATGGGAGAGATGCTCTTGAGAATGCAACTGA
CATAAAGTTGTACAGGAGAGCTAGCAAGCACAGAACTGTAATACCACAGCCCAGTTACTA
CTCTACATAATTCTATCAAGGGGCTTTTCTGATCATACTTTCTTCAAGATTGTTACTGTC
CAACTGGTCAGCCATCAGCCCGATGGGACGGACACAAAACAACCTTCCTATCTTGATCTT
GGCTAGTTATACAGATCGAGTAGGAAGAAATGGGAGAGATGCTCTTGAGAATGCAACTGA
CAAAAAGTTGTGCAGGGGAGCGAGCAAGCACAGAACCGTAATACCACGGCACCAGACTCT
ACAAAATTGTACCAACACCTGTTTCTGATCATACTTTCTTGATAATTGTCACTGTCCAAT
GGGTCAGCCATCAGATCAAGTAGGAAGAAATAGTACTCCCTCCGTTCCTAAATATAAGTC
TTTTAAGATATTTCGTTAAGAGTCTACATACAAAACAAAATGAGTGAATCTACACTTTAA
AGTATGTTTATATACATNNNNNTGTAGTCCACTAGTGAAACCTCTTTAAAGANNNNTATT
TAGGAACGGAGGGAGTACTCAAGAAGACCTTCCAAACTAAAACTAGGTTGGTTATTCAGA
CCTAGTTAGTAGTTACCAAATGCTGGAATCAGGAAGTGCAAGCTTATTGGCAGACAAAAA
TGTGGACGAGGATGAAAGCTCTCAACGGGGGGGACAAAATATTACTAGGGAATTCAACGC
CATCAAGCTCACAATACAACAGAAAGCATATAGTTTATAACAACCATGTAATTTTTGGAG
ATTCAGTCAGAAGAAAACCAGGCACTTACATCTTATCACTGATTTCCTCCAGCAAATGCA
TAAGGGTCTTGGCTAACTTCTGTCTTCGAAATTCTGAGGCAACAGACACTGCCGTAACAT
GTCCATGCCAAGATTCACCTTGTCCTTCAACCTTACCCATAACTGCAGTGTAAGTAAGAT
CCTAAATTATGAGAGAGTGGACAAGGCAGAAACGGAACAAATATAACATGAAAGGATTGT
ATTCGTCTATTCAACATAACAAAAATGCATACTCCCTCTAATAACATGATGTTCATTCCC
TTTCCATTCAAGTTCAAACCCATAAGCAAACCACGGTTATACTGTCAATTAGCAACATTG
GTAAATACCCTTCGAATCCCACACAATCGTAAGTGCCACTTTCACCACGGAGAGGCACAG
AGCAAGGCCAAATTGGAGAACAATATCATACAATCTACGAAGATTCACCTGACTGAATAT
GCACCTGCAGAAACCATTACTAGGCAGACAGATAAACCTATCCCTAAAAATCCCCACCGT
TCAACTCTCAATAGCAAAATCGAGGGGGCTCGCACTCTACGGATCCAGCCAATCTGGAAC
GCAAAGAAGCAGAATCACAAGCCCGTCGAAGCCGGCCAAGGGCAGGAGAGGCTGGAGGCT
TACTGTATCCCATGACGCGGTCGCCGGGGTTGACGGCGGTGTGGAAGTAGTCGGGCCAGC
GAGCCATGTACGTCATGTAGAAGGACATGTTGAACTGCGGCGAGCGAATCGGCATGTTAG
ACCGGGGAAGAGGAGATGTCCGCCGGACGGCGTCGTCGAGAAACGGCGACAGGAGAGCAA
AGGACGGATCTTTTGGGGATGGCTTACGGTCTCGGTTAGGTGGTCGAGGTTGACGGAGGC
GAAGCGGAGCAGGTCGTCGCAGCAGAACCGGCGAATGGTCGTCATGGCCTCCCTCGCTTC
CTCGGCTTGCGTCGGCAGCGGCGGCGGAACGGATTCAGGCGGGGCGGAGGGGCGCTCTGG
GGGTGTTTGGATAGCGTCCTCCTGCGCTCCGTGCCTGAAAAAAAAACGTGCCTGGGTTGG
GCCTGGCGCCTGGTAAATTATTTAATGGGCCTGGCGTTCGTGGGCTGAGATGCAATCAGC
TTGGTCCAGGCTAAGCAAGAAGCACGGGCAAACAGTCATTCCAATCACGGATTTGAGCAA
GGCTTACGACCGCATCGAG