morexGenes - Barley RNA-seq Database

Contig contig_84868

Source Contig contig_84868

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_84868 (2745 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_84868

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_79408	2	793 bp	MLOC_79408.2	Available	Available	None

CDS Structure of MLOC_79408

Contig Sequence (2745 bp)

>contig_84868 2745 assembly3_WGSMorex_rbca.fasta
TTCCCCCTCTTCCGCCATGGCACCGCGCCGCCGCCCGAGCTCCGGCTTCTTTGGCGTGCG
GGAGCGCCCCTCCGGCCGATTCGCGGCGGAGATCACCGCTGACAGAGTTCCGTGGTGGAT
AGGGACATTCGACTCCGCCGAGCTCGCCGCACGCGCGTACGACGCGGCGGCGATACGATT
CGGCCGACCGCGGCGGGACCTCAACTTTCCCGACACCGAACGCGAATACGCGCTGTGGCT
AGCGCCGCCGATGCACTTCGTCGACGTGATGTTAGAGATGCTCTTAAGTCATTCAACCCC
ATGTTCAACCAGTGAACCAAAGCTCTATTTACTTTAATTGCACCGCATGCATGCATAGCT
TGATTCTTGACTTGTCGTCCACTGAGAACTGCATATTCTTGTTCACAGGCCAGTTAATTA
ATCATACTCGGATCACGGCAGTACGCCGGTATAATTTAACAATTAATTCGCGATGGTGAC
TTGTCCACTTTAAATTTCTTTAACGTTCTGTACCATGATCGCGCAGGACAATAGGGACAA
ACTGCTGGAATATGCTTGCAGGTTTAGAGAGAGAAAGTGGGGATTAGAAAATTGGATTAG
ATTACTCACAGGCAAAGAGCTGGAAGGAGGGAGGGTAAAAGAGCTAGAGCTGACAAATAA
GACGAAAGCGGTGGCGGAATCGGATCCCATACATAAACAGTAAGCGGGAGATGCACGGAG
ATACCCAAGATGGCAATGCATCTCTAGCTTTTACTAAGTTTTAACCCAAGTTGGGCCTAG
TTTTTGTGTCTAGTTACATCCATGTACTACCTTGTCTCTACCACCGGCCGCGTCTCTTTC
TTGCAAACCAACCACAGAACACCCGGTAACAAATGGCCTTCTTCTCATCCACTGTTCTCT
CGACGTATACTTACTTACTACAGAAAACAAAGACTGCGTAGGTAGGCGCTATTGACGTCG
CATGCAAAGTGGTAGTGGTCTCCTTCGACAATTACGCTAAGAAAACATATTTGTTGAGTG
CATAAATACTTTAGAAAAATGTCTTTTCTGAGAGATTACACTACGAATTTTGTGAGTGGA
TGTTCGGAAATGGCTTTTCGCGAGACTATGCTTCGTGTATGTTCGAAATGATTTTACTGA
CATAAAAAACGGAAAAGAAAATTGACATGCATTTCTTCGTGCCCTTATTTTGGATGTATG
TAATATCCATGGAGAGAACATGCGGCACGTACTAAAATCAAATTTTGTTTGTTTTTTCAC
ATCACAACATAAGTCGTTTATTCGTCTAACTTCACACGCAAAAAATGGACACACATAGAT
ATGTTGTAAGAAAATTAAGTTTTTTTTTTACCATTTTACTGTTTATCCGGGAGTCACAAC
TTTATACTCCACCTCTTTTGTAAGATCTATACGTGAAAATTAAGTTTGTATTAGTGCCCA
ATATTTACTTCATTTAGTGGTTTATCTCACCTGTTTTTTAGATACTCAAGTATCAGATAT
ACTCCTACTGCACTAGTAGATAATAAATGAATGTGAAGAGATAAAAGATTGCAGTCATGC
AATTGAAGCGAGATGAGCCGAAAATACAGGGCCTCTCTCTCTCTCTAGCCTGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAAAATAGGCGGCCATGCGGGCGTGCCCAATAGCGTTGCTC
CCTGTACCTTTCAGCTTTATAATCCCCCACAAATCTCCCCACTCCCGCAGGCACCCTCCC
CCTCCCTCTCCCTCCTCCCTCAAAACTCTCTCTCCCTCCCTGAAAATTCTCCGCATACTG
GTGCCCAAGTGGTGCCGGCATCCCGCTGAGGGCAGAGAGAGAGAGAGAGAAAGAGATCCT
CCTCCCCTGTCCCCACTCCCCTGACCCGCCGCCGAGCCGGGACGAGGAGGAGGAGGAGCT
GCAGCTCAGCTCCGCCCCAGCTCAGCCCCCGGAGCCCGAGCTGATCGACCCGCCGGCAGC
GAGATTCGGCCAGGTAGCCCCCCTCTCCCCGCAGAATTCCGGGTTCCTTTCGGGTGGGCG
CGGGGATGCTGATCCGTGTCTGCTCGGGTGCTGGAATTGCGTGCTTGGCCTTTTTTCTTT
CTTCGGCCCCGTGGGAATTTTCCATTCTGGGGGCACGAGGAGTGGTGTTTACGCCTTTTT
GTCCGCTTGTCTAGTGGTTTGATCTGTCGATTGCGAGGACACCCTTTCCTCTTTTTCCCA
CCTAAATCCTTGGCTAAAACTGCTGTGCTTGAGCTCAAACATGTTCAATTCAATTCTTAA
CCGGGTATTAAATGCCCCTGCCCTGCTGAATTTGGGAAGGAAGTGATTCCAGTCTGGTGG
CTTCTCCTGGTTCTTGAGTTGCCGCGTAATAAATACATGCTTTGTTCTCGTGATTTTCTA
AACAAGTTTGATCGGCTTCTGGTGCTGTTTGATTGCATAATTCCAACAGTCCTGTGTGAT
TCGAGCAGTGGTAGAACTCGATTTTCTCCACAAAAAAGGTACTAGTTGTGGTCAATTCGT
AATCTAACAAAAAATTCTTTCTTTTTCTTTGTTTCTGGGGTAATTCAGGGCACGATCGAC
GGAGAGATGTACCGGGTGAAGAGCGAGAGCGACTGCGAGATGATGCACCAGGAGGACCAG
ATGGACTCGCCGGTGGGCGACGACGGCAGCAGCGGCGGAGGGTCGCCTCACAGGGGCGGG
GGGGGGGCCCCGCAGGAAGGGGGGGGGGCGGGCGGCGGGGGGGGG