Map Locations of contig_84827 (3321 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_84827

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79396 1 430 bp MLOC_79396.1 Available Available None





CDS Structure of MLOC_79396






Contig Sequence (3321 bp)

>contig_84827 3321 assembly3_WGSMorex_rbca.fasta
CACACGCCATTCCAATCTCCCCAGTCTGCAGCCGCCCCAAACCTCCATCCCTCGCTCCCT
CCCTCGTTCGCAGATCCGAACCCTCCCCCGGAACCCTAGCCATCCCATGGCGCCGCCAAG
CTTGTCGCCCTCGGCCGTCGCACCGTCACGGGGCTCCTCCGCCAAGGCCGCGCCCGAGGC
CGACCAGGAGGCCTCGGTCACCAAGCGCCCCCGCAAGGGCACCTCCTCCTGCAAGAAGAA
GCCAGTGCTCAAGGCCGCCAAGAAGCCGCAGAAGGCCACCAATGCATTGTGGGAGAAGAA
GGAGAAGGCGTAGGAGAACCCGGCGGCGGAGGATGAGGTGTGCGGGGAGGACCTCGACGA
GGAGGAGCTGGCGCTCGGGGAGGAGGACGAGATGGCCGCCTCCGGGGAGCAGCAGGAGGA
GATGGCGTCGGTGGCCAAGAGGCGCGTGGCGCAGCCGACCAAGAAGGCCCGGAACATGGC
CGCCGGCGATAGGGAGCCCGAGTTCCTCGGTGAGCCCGTCCCCGCCGACGAGGCCTGCGA
CAAGTAGCCGCAGCGCTACTAGCGCGGCTCCCTCAAGTGGTGCGTCCCGGATCTCATCTC
TTTCCGGCTTTTCGTTTAGTGCGGTTGGTTGCTGTTCATCAGGTTAAACGCACGCCCTTC
TTCTAATCCCATGGCTCCACTATCGCTGTTCGTCAGGTTCAGGTTCAGTTAGGAAAGGGG
TTAACAAGATGGCAGGTAACTCCTTTTCATCTTTTCATCAATGAGAGACGAGAGAAGCAA
GGCCAAGGGAAGGCAAGCTTAATACAGCTTTGGGTTCAGTTTTTCGTTCTGAATGTTCAA
TACAGAACCAGAGAACCTGACTCTTCCCCTTGACTGTTGTACGTGTCGTTCTTTGGGGTA
CCCATTACCCAACCCACCATCTCGTCTAGCTAATGAAGTAACTCTCTAAGAGGAACCTCC
TCGCAAGATTAGATTACCATCCGGTGCCATGTCATTTCCTGTAATCTCAACTGAAGAACT
CTGGTACATTTCTCTTTCCCCGTCATGCTATTTACTTCTGGTTACTACAACGAGCCTTTT
TAGCCCCCCGGCCTCTGTATAGAATTTTTTTCAATCAACAGTTTTATTTTAGCTAACTAC
GACATTGACTGGAGCCCGCGACAAATAGCTAACATGGGTAAATCAAAGATGGTTACGAAT
GATAATTCAATTTTTTATAAGAGGAAGATTTGACTACTGCTACAGGCAACTGTCTCTAAT
CTGAATTTATATAGTTGATCAAAGGTCTGAGTGGACTATGCAAGAACAATAAATTTAATA
AATGAGCCTTGGTTGATCACCCTACGGTGTCCCAGGCGTACCAAGGAAATTTATACTGCT
ATACTGAGTTTTTTCTACCGACTCAATTGATCCTATGATCAACTAATTTTAAGCCTTAGA
ATGGCCAGATGTAGAAAAACTAAGTAAAGAAAAATACACAAAATCTTCATTATTGTGTAC
ATGTTTTGTGCACTGTTATATTTACAGTAGCTTAGTTGTAGTCCAGATACTATTGCTCTC
CTTCTCCTGGTGAGAGGCAATGTAAGTATACTCTGTAGCTGTTGCCGGTTGGTTAATTAC
CTTTCATAATGCAAAGAAAATGCAACACTGTTGCATTTCGTAAGAAATATCCATATGTTC
CAATCAATTACCTGTTATTACTTCATCCAAAGCAATTGCACTGGTATAACTATTTCTGCT
GAACCGCACTATAATTTGCAAGCTGAATCCGAGTTCGTTGGTACATCACACAAATGATTG
ATACTAGTGTTTATTGTCCCAAACTGCACGGACCAGCCAATTGACTGTCTTTGCGCTGTT
GATGCCTGCATTACAGAGTTCATCTTCCTTTGGAATACTTGATTTGCATACCATTTCAAG
GTTCCAACCTGATGCGGTGACCTTGGCGACGGTCGCGGCACTATGGACCGCATCAGGTCG
AGTCTGCAGCACAACTGGAACAACACCGAGCGTGGCGACCACAGGCAGCCGAGCCTAGCA
TCTCGTGACAAGACAGCACACCATGAGTTGCAAGGTGAGCTACTTTGTGCTATTTTGGTT
TGTGATAATCAGATTCTGGTAATAAGCTGTCACATTGTTTCTTATTTGCAAGACCCTGCC
ATGTTATTCTGACTGAGCATCTCTACATTAGTTTTGTTGTGTCCTAGTGCATCATGTCAT
GTTGAGCTGAAAGCAGGAAAGTATTTCCCTTGAAATGATGATTATGCTGAAAGTATTTAG
ATATGTAGAACAACACACATTAATTTTGGAAACTTGTTTTGCTGAATCCGATAAATACAA
GTGTCGTATAGTCTTCATTGTTAACATGGTGCTTATATTTTGAAATGTAGGACTTGTGAA
CAAAGACATAAATCGTTTGTGGAACAAAGACATAAATCGTGTAGAGACTGTACCCATTTG
CCTGTAGATACTTCTCGCCGGAGCTATTTATCCGGTTCGATCTGCTGATCGCTCCATTTA
TTCAGCCACGATTCCTGGATTTTGATGCTCGTCAGTCAAGGTGACGGATGTGTTTCTCTT
TCTCGTTTATCCATTACCTGTTGGCAGAATTGCTTGATGTAGCCAGGTTCATATGCAGAT
ATGCTTGTTATTCATGTGCGCTGACTTCCACTGCGCGAGCGTTTCTGTTTTCTACAGACA
ACCTGATCCATGTTTGATGGGACATTCCATTTGGGCGACCCGCAGCGGACGATGTGATTC
TGAGACCGAAGGCAGTGGTAAAGACGGACACGAAGCTGAGGGCGCTGCTCAAGGACTGGA
CGGGCACCAAGGCCAGCCGCGCCCACGACCTGTTCCTGGCGCTGGCGACCTGCAACACCA
TCGTGCCCATCGTCGAGCACATGGTGAACCCGGCGGCGAAGCTGGTGGAGTACCATCGCG
AGTCCCCCGACGAGTAGGCGCTGGTGTACGCTGCCACGGCCTACGGGCACAAGCTCCTAG
AACGCACCTCCGGCCACATTGTCGTCGCCGTGTTCGGCACCAAGCAAAGGTACGAACACA
CCTCCCCACCCATCAGACATGACGCACCGGCCCTAGCGTCATGTCTTTGTGACAAACTGA
CAATGCGAGAAACTACCATGCACCGGTTGTATTTTGCCGAATAATAGATAGCAAAACTGC
AGGTAGATAAACAACCACAGTTTCACACAGAAGCCCATACAGTTTCAGTCAACTATATAT
ATCTCGAGTCACACACACACACACACACACATTTCAGTCAACTATATATATCTCGAGTCA
CACACACACACACACACATTT