Contig Data
morexGenes
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Map Locations of contig_8426 (3451 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_8426

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79278 2 1310 bp AK249011.1 Available Available None
MLOC_79279 1 276 bp MLOC_79279.1 Available Available None





CDS Structure of MLOC_79278






CDS Structure of MLOC_79279






Contig Sequence (3451 bp)

>contig_8426 3451 assembly3_WGSMorex_rbca.fasta
GGCGCTGCAGTGGGAGGAGGTGGCGGTGGGCGAGCCGGGGGACGGCGAGATCCGGGTCCG
GAACACCGCCATCGGCGTCAACTTCATCGACGTCTACTTCCGCAAGGGCGTCTACCCCGC
TTCCCTCCCCTTCACCCCCGGTACTGTATTACCCCAACCCAACCCTAAAACGGGTTTCCG
CTAGATCGATCGATCGATCGATGACATCTTTGCTGCTGCTGACGAAACTGAAGGAACCGG
GCCAGTTGCCACTCAAACCAACACTGTCTCACTCACCATTTTACTACTAGTCGACACACC
ATAGTTTTATTTGATCCATCGTGAGTTGGTGTAAGTAAATACCCAAGGGGCAGGATTCCC
GAGTTCATTGCTCGCTGAGCGTCACACCAAATGCCAAATGGTCAAACTGATCTTATAGCT
CAGGATTAGCGCTCAGTTGTGTTATCCTGCGACATCTAAGTATTGCTTATATCAGTTTAG
TATTGCTGCTCGCTTTTCTTATCCTGTTTCGATTACATTGATGATGCCTTGCTGATGAAA
CTGAAGAAACCGTATCTATCCCGGGCCAAATGCCACTCAAAACAAAACATTGTCTCACTT
TCCTAGGTTCAGAGATGTCTCTTTAGTTTGACCGTCGGCTCTTTTAGATGCTCAGAAGCG
TGATTCTCTCGAGGTCATTTGCTCACTGAACATAAGACCAAACGGTCCAGTTTATTTTAT
CGCTCAAAGAAGAATTGATGCTCCCTTGTGTTATCCTCTGACATGTGCTATATGGCATCA
GACTTCTGTCATTTGGCTTGTGGGTTGTGCTTTCCGCCGTTATTAGTGTTTCTGTTCCAT
TGTTCTCTAGCTTTATGGTCTGTTCCACCTCCAGGTATGGAAGCTGTTGGTGTGGTGACC
GCTGTAGGGCCTGGCCTGACCGGTAGGAAAGTCGGGGATGTCGTCGCGTACGCAGGCAAG
CCTATGGGCTCGTATGCTGAAGAGCAGATTATTCCAGCCAATGTTGCTGTTCCTGTCCCG
CCTTCAGTAGATCACAAGACAGCGGCTGCCATCATGCTCAAGGGGATGACTGTTCATATG
CTAGTTCGCCGCATATTTAAGGTACATTCTGTCTTGTTCGTGTTGTAGAGTTGTGTGACA
TACTAATAAAGTCCTAAAGTTAAGAAATGTGCATAGGTCAATCGGAGCACCTAGATAGAT
AAAACACACTGTATGTATCCAGGGGCATGATTACTGCGGATTATATGTTGCTTGTTGGAG
GCCTGATAAGCAGTTTAAACTGCTTAAATGCAAGCTATCCGTGTATCATAAACTAAAGAG
ATCCACTGTAAGAGTGAACATGTTTTTTTTCCTTATCATGGATTATTGCAAAAATGATTG
CCAACCCCTACAGCATATGTTTGTGGATCTCTACAACCTGTAATTACTGTGTCTGCATAT
GTTAGATATGCTCAGACATCAACATCGCTTCATGATGATTCAGTCGATTGCCATGACAGC
GAGCTTGACTACATTTTGATTGCCGTGTAGGTTGAGACCGGCCATATTGTTCTCATCCAC
GCTGCTGCTGGTGGAGTTGGGTCACTCCTTTGTCAATGGGCGAACGCCCTTGGTGCTACT
GTCATTGGAACTGTTTCAAATGAAGAGAAAGCCTCACTTGCACATCTAGATGGATGCCAC
CATGTGATCATGTACACAAAGGAAGATGTTGCAACCAGAGTCAAGGAGATTACAGGTGGA
AAAGGTGTAAATGTGGTCTATGATTCTGTTGGAAAGGACACATACAAGGTAAGATTGCTG
TACCAGGTCCTAGTTTGGAAGCTTGATTCACTTGGACTGCGTTCTTTTTATCCTTTCGAT
GATACTTTGCCTAGAACTACTATTTGCTTCACACTGAATACTGAGATCTGAAGATAATCT
GCTCGTGTTGCGAGCATCCCATCAGTAAAAAGAATAACTAATGTATATTTAATACCTGTT
AATGTGATCTGAGCACCTTTTTTGAAAGAATCGGTTGGTGTTTACCTTCACGTTGTCATG
ATTCAGTAGCATTCCTGGGCATAATTGGTTTTAACTACGCCGCCTGCATTTTCATACCTT
TCAAGAGATACAAGCATGTTGTGTAGTGTTTTGGCTGCAACAAATAGTTTTCTTGAACGG
CTTTTCTGTAACCACCTGAAATATCGCCTTTTATCTTCCTTTTTCCACTATTTGTTTACG
AGTTCACAGATGCATGATGTCATACTGATTAGCGGAATGACACTGGATCTGTTCCTGTGT
GCAGGCATCCCTGGAGTGCCTGGCGCCCCGCGGTTTCCTGGTGTCGTTCGGGCAGTCCTC
GGGCTCGCCCGACCCGATCTCCATGGGCGACCTGGCGTCCAAGTCGCTGTTCCTGACGAG
GCCGAGCATGATGCACTACACGGGCACCCGCGACGAGCTGCTGGAGGCGGCGGGCGAGGT
GTTTGCCAACGTGGCCAACGGGGTGCTGCACACCCGCGTGAGGCACACCTACCCGCTGTC
GGAGGCGGCCTGCGCCCACGCCGACCTCGAGGCCCGGAAGACCTCGGGGTCCGTACTGCT
GATCCCGTAGAACTAAGCACCGTCGTCTTTTCGGTAGGAGAAGAAGGAATAAACAGGGGG
CTCGACGATGTTTGTGCTCTACAATCCACATGCATGTAAATATGTTGGCAGGAGTTGGAG
TTGCATCTGAACACTGATTCCTCTTATCTGTCTGTCTCACCTGGTTATGTTGGATTCAGT
ATGAATGAGTTGGATTGCGTGGAATTGTTGTGCACATCACAACTGTCTAGTACCTGTGAA
TGTGATCATCTCATGTCATGTGTTTGCGCTACAAGTTGACCTTTTTTTTTATGCCTGTCC
CTGTCCCTGTTTAGGTGGAGAAAACAGGTAGAGAAAAGTACTAGGAAATTAAGAAACATT
ATTGCAAATACTTTATGTGTGAGGATCAGCATTTTATCTACTATTATCTCATTTTATTTG
TTTTGAAGCGATCATCAGAGGGAAAAAGAAGAGGAGTTGTTCCGAAGTCGGCTTTCGCAA
ATATTTTATCTACATTTCATTTGTTCGTTTCAAAATTGCTGGACACATAAAGAAGAAGGG
TTGTTCACAAGTCGACTTTGCAATCATTCTTGTAATAATAATACAAGTATAAATAGAAAG
AATCAAAAGAAGAAACACAATTGAAAACGTCGGCCCTTATTTTCTTGTGTTTAAAATGGT
ACAGTAGTTGTTGCTGTTTAAAAAAGGATCCAGAGAAGGAGCAGCGCTGCCTTCTGGTTC
TGTTCTACGCCTCTTGTCCAAGAAACAGGGGAGAGGGAAGAAAGGCTTGATCTTGACTTC
TTGACCGGCGGCCACCATGGCGGCGGCGGCGGGGCAGCGGGTGGTGGTGATGCGGCACGG
CGACCGGCTGGACCACGCGGAGCCCATGTGG