Contig Data
morexGenes
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Map Locations of contig_84111 (4118 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_84111

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79251 4 439 bp None Available Available None
MLOC_79252 2 340 bp MLOC_79252.1 Available Available None





CDS Structure of MLOC_79251






CDS Structure of MLOC_79252






Contig Sequence (4118 bp)

>contig_84111 4118 assembly3_WGSMorex_rbca.fasta
GAGAGTTCCACAAAGATTGGATGAGAACCACAAGTTTCATCTCATCCTCTTCCTCTGCAT
AATATGCTCTTGCCATTGCCGCCTGCAAGAAGAAAATGAGGTAAGGCTTTCATTGCACGC
ACGATAACCAATGATAAAACAGTAAAAACATGTTTTCTTATTTATCTGAATTTTTCATTT
TTTGTTTATTAAAGATAAAGAACAAATAGTAGACTGAAGAGCTTGGTTAAGTGGCAGTCT
ATTAAAGGTTTTATGTAGGCACATTTGTTAAATACATTATATATGACACATATTTTCAAA
GTACATAGATAAAAATCTTGATGGGTGAATATAAACAGAGACACATGAAGAGGTCTTGAT
GAGACATCTAAAATGTTCAAGTTGATTTATGCAGCTATGTATACTTTAACAGCTGGGTCA
GAAGCATATTTTCCATCTGATCCACTGATATGATGAGTGTGTAGCCCTCTGAAATAAATT
TGGGAGACCATATGGCTGAATTGTGATAAATCCAGAGTCTATTTGGTTACCTAGTATCAA
ACCAAGTGCATCCAGTAGTGTGTGCCAAACCTGTTCAGCACATCCAGGCCTTCATTCCGA
GCGCCTGTACCTTGTGTTGCCAAAACTGCCAGTCACTGACTTTAGAAACCATGTGAGCAG
GAAAAGATATGTCGTACTGAATTCGAGACAGGCAAGTAATGACAGATAAATCTTACATAT
CGTTCATGTCATATGTTGTATAATCAAGTGCACTATGTGGGCTCAATATCTTCTCCATAA
TTGCGAACAATTGTAAATAAAGTGGCATGCGTTTTAGAGCTACCATATTTCTTCAATTGG
CTAGCACTGTACAAATTGGTACGGATGTACGTTTATATGTAAAGTCGCTGCTCGACCTGA
AAGCCTAAAAGGGTTGATCCCAATGATGGGAGAAAGAGATAATAATCTTTTCTTCGGTTC
TCATTTCATGGTTGGTTCAATATCAGCATGAAGCCTTTGATTGATTTGCGAATAGAGACA
AAGGTTCAATAACAAATGGATAATGCAAAACGCACACATTATCATGCATACCTGCACATT
GGCCACAAATGTCTCTTCGTAGAATTCCCTGTTGGCATATGAATTAGATAATGCATTCAA
TGGCATGGTCCCTATCATTGATGTCAGCAAAGAAAATAAAATCATGTGTTGTATGGAAGT
AATGCCCTGAGAGAGATAGGTCTGAGCTTTGTTTGCAAACACGAAGTATCAGCTAACATG
AAATGGAACAATTTGTACAAAGATTTTAAGGGAAGAAAAATACTGAGATAGAATATAGAA
AACATTGCAGCAGCTCATACCTTGTTGTGACTCACGACATCCCAATAGTGAAGCAAATGT
TCTTGTAAAACATCCAACTATGAACTATGCAATTGAAAAGAAACCTCATGATGATGTCTT
GGCTTAAGTGTAAGTAGATGTTGTTTATGCCCTCAACATCAATTATGGCAGTATTATTCC
CCATCCTATAATTCAAGAAAGTAGGCTTTTGAGATGGGCTTGGAGTAATGACAGATTGAG
AACAAATAACTATAATAGGCTAGGTAGACAATAACTTCTGAGGACGACATCATCTGAAAT
GGAGAACGAAACTACAAATTCAATATATGATATTTCGATTTATATTATACAGTATATATT
CATCATCTTTGAAAATTAAAATTCAGCAGATGTACTCTCAAATCTGACCTTTTCAAGATC
GTATCGTATGCATACAGAGAATAAGCAAATGTGACAGAATAAGGAGGATGGAATTTGACC
CGTTGGGACTTGACAACACATAGATTACTGCAGATGCCTGAGTTAAGAAACACTGAGCCT
CCAAGAAAGATCCAATTCCTTTATCTGAAATTAAAAAATGCAAAACTTGCAAAAGCATGA
TAATGTATTTCAGAGAAAGATCATACACGTAATTCCATTATTTTCTTGGAAAAGGGAAAT
GCAATAATATGATCTATGTCTGCATTATCATTGAAAGTTAAATTTTACAATAGTTAAGAC
CAACTTAGCCATATTGAAGTATATTAACATTGTGTGCCCTGATTAATATAAGAAATAGTG
GCCCTTGGACAATCAAGCAAAAATTGTTCGGTAGTTCACCATCTATAGTTATATATTCAT
AAATCTGCACAACTGTGTCTGTCTCACATGATTGGTCCCAAAGAAGAGTAATTTCAATAT
GAGAGAGTAACGAAGTGCTTGAGCAAATGATAGTCATTGTCTAGATTTGTGAATTTAGAA
AATAGATTCATGTTCTATCAAATGTTGGAAGAATATAGAATAACAGGTTGCTTTCACCTA
AAGAATGAAGATTGCTATGAATAAGGAGTAGACAACCACACATACTGTTATTTTTGCTAT
TCTAAATTCTAGAAAATTATTGTTTCTAAGTAGGACCGTGGACATGAGATGCATTTCATT
TCTTGTCCAGGGGTAAACTGAAGTTGATGGTCATGTCACAGGTAGAGTAGAACACATAAC
AATTGGTGGGCGCACCGTCGTACCATGAAAGTCTGATGTGCGCTTGTCTAAGTACTTCCG
TTAGCATTCTGAAAGTTGTGCGGATTAGGAAATGGTTAAACAAAATGCACCATGTGCTCA
GCTATTACTATAATTACATGGAACTAAAACATGCTGAAAACATCTATCATATGATTCATT
GATGATATGGCGTAAGACTGAAAGGAACTCTATGATAAATTACTCCACAAGAATCATGAC
TATTAGCAATATTCATACTCCTCCAACCTGAACTAAGGAAACAGTAACACAACCTGAACA
TACCAAATGATAGCGCATCTGATATAAATCAGAACAATCTAATACAGTACATATATTGAG
AAGCTACATCAGTTTGCGATGAATATCATCCATATCCTCATCAAGAGTTTTCAGTGGGCA
CAAACCTTGACAAAAGATGTCCGGTCGTCGGCTCACCAGACCAAGATGTGCGCCACTTGA
AATTCCTGAACAATAGTGGTTGCTAATCAACTGAATCAGGAGAAAAGAGGATTTATGCTA
ACAAGGTGAAGCAGGATAAAAGATGCATCAAAACAAGTTAACAAGCTGAAAGAGGTAAAA
TTTATAGAAGCGTTACTGTATAAATATAAAAAAAGTTAACAAGTTAGCGTAAAAGAGGAT
TTATGCTAACAAGCTGAAGCAGGTAAAATCTATAGAAGCGTTTCTGTAGAAATAGAAATT
GCTAGATATGTATTTTATCTTGATTCCACAAAAACTGAACAAAGTTAAATATAGTCATAT
TTTGCAAGAATTCTACAATGCTTAAACAAAAGACTGAAATATTAGTATGATTATTTGGAC
TTTTTGTGGAACCTGAAGCTAGTTCTCAGGGTTGTCCCTCATCTCAAAGCACATATATGT
GGATCGTATATATATACTAAGTAATGATTTTTCATATGATGAATACCCTTGTATTAACCT
TCAAGCACACATAGCATAAAATAATAGTCTCGCAAGGGTTCAAACATCACAAATTACAAC
TCACAAGCTCTCAAGTTCACAAATCAATCACAACCAGTTCATAAATAAGTAGCTAGTTAA
TGTTTCCTGCAACACTACTAAAAGGAATACCTGTACCATAGATTTTTTATGCAATAATAG
CATCAAGCTTGTTCTTCTCAAGTTCTCATCTTCTCATATCCAGTAATCACACGAGATGTA
GATCTTAGACTACCTTGCCGACTACCCCATTAGCAGATTGAGCCTCTTTTCTAGCGTTCT
GCTTGAGCTCGAGCTCATTGCCAAAACACTGCTTGCAGAATAGAAGTACTATCCCAAGTC
ATGGCTAATCTGAACGGTAAAGGGAAAATCGAACAAATAAACTAACGACAACACCAGTTC
GGGAGGGGTGGAGAGGGATAGGAGAGTGAAAAGAATACTCACCACTGGGGTAGGGGAAGC
AACAGCAGTCAACGGACATATCCTTCTTCAAATAAACTGGCGAGCACAGATCGGATGAAG
CCCTTTGTGGCTGCAATGATGGCGGACCCTGGGTGACGAGCGAGGGGCGAGTGCTCTCTC
TCTCGCAGGTGAGCCGCCTCTCCCTTCCTTCCTCCCCC