| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_83839
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_79197 |
2 |
526 bp |
AK354623 |
Not available |
Available |
None |
CDS Structure of MLOC_79197
Contig Sequence (5246 bp)
>contig_83839 5246 assembly3_WGSMorex_rbca.fasta
CTTCCAAGATAGTGGAATCATTACTAANNAAAGTCATGACCTCTCCAAATCCACTCTTAT
CATTATGAAAATATTCAACACCCTCCAAAATAGTGGGATAATTATTACCTAAAGTTGACA
CTCTTCCTAAACCACTTTCATAATTATTGCAATCGTCATAAAAAGGAGGCATGCTATCCT
AACAAATTTGATCATGTAAAGTGGGGGAACTAAAAGGATTATCTTCATTTAGCATAACAT
CCCCAAGCTTGGGATAAACATTATTTGCAGCAAATACATTCTCAAACATATCATTTTCAT
CAAGCATAGCATCCCCAAGCTTGTGATTCTGCATATCATTAGCATAATCACTCTTATCAT
CAATAGTATGAATAACACTAATAGTATAACAATTATTATCATCATAATTTCCTAAGTAGG
TGCCAAAAATATTTTCAATATTATAAGGAATATAATTATCTCCCCAATCATAACTATCAT
GACAAGTAATAAGCATAACGAAACCATCCTCAAGTGTATCATCGTCCACAATTCTTTCAA
ATTCATTTTCAACAATGATAGGAGAAACATTATTTGGGAGATATACCTTTTTACCTTTAC
TTTTACTTCTCTTCTTCTTCTTCACCACCTTATGTGTAGGTTTAATCAGTTCTTTCGAGG
TTCTTATTGAAGAGATTGGTTCGACGGGAAACTCTTCCTTGCTACCAGATTCATTACGAG
AAATAATAGGGGGTACTGGGAGACCTTTACACTTCCACTAGTATTCCTTTTATACTCTAT
CGGTTTTCCTTTCTTTCTATAATTGGTGATATAAGCATTCTCATTGCAACTTACCACACA
AAACATATAGAATTCTAGTAAATTATTTTCAATATCCTTAGTGGTAATGAATATACCAAC
TATTCTTATGGGCAATTCTTCACAACCCAAAAATAGATAACTTTCATTATAAAGTTCAAG
GGTGATCAAGTTATCACAATATTTTGAAACAATTCGATCATGAAAAAGCATGCATTGGAA
ATTAAGATGGCCAACTTTACTGCAATGCTCACAAGTAATGGGATGAATAGAACATAATTT
GGTAGCACAATCATCTATACCTTTAAGCAAAAAATTGGTTTTATCATGTTTATGATTCTT
ACAAATTTGATCATCCCTAAATGACATGTCTTCACAAAGTTTATGCACTCCACAAAAATT
GACATGCTTATAAGAAACCTTTTCATCATGACTAGTGCAATCATCATTAGTATTATGGAT
ATTGAGAGAAGAAACACTAGTGACATTGCAATCATGCTTGTCATTCAAGGATTTAGTGGA
AAACATTTTATTGAATTCTTCTTCTAATGCTTTGGCACAATTTTCCGATCCATCATTTCC
ATTATAAAGACAAAGAATTTGAGGCAACATAATTCCAGCTTTTGTAGTTTTGTTTTGTAA
AAACAAACTAGTAAAAACAATAAACTAAAAGATTCAATTGCACTATCTAAATATATACCT
TCAAACACTCACCTCCCCGGCAATGGCGCGAGAAAATAGCTTGATGTCTACCATGTAACT
TTATTCTTATAGACTCTTGTTAGGCCTTCAAGCACAAATTTTTGTAGGAGAGTAGCAAAT
TTCCCTCAAGTGGTTGACCTAAGGTTTATCAATCTACGGAAGGTGTAGGATGAATATGGT
TTGTTTAAAACAACCATGCAATCAAATGCAAGTAATCTCTTGTGTCCCCAAACACACCCA
AGACAATGACAAATTGTATAGGTGCACTAATACAGCTAAGAGATGGTGGTACAAGTATAG
TATGAATACTAGATATAGGTTTTTGTAATCTGAAATAATAAAACATCAAGGTAGCAAGTA
GTAAAAATGATCACAAATGATATTGTAATGCTTAGAAGCAAGGCTTAGGGTTCAAACTTT
CACTAGTACAATCTCTCAACAATGCTAACATAATTGAATCATATAACCATCTCTCAACAT
GCGACAAAGAATTATCCACATGCAAGACATGTATCAAGTGTTCTCAAATCTAAAATATTC
AGTCCAACATAACAAAATCTCAAAGGGAAAGACTCAGTTCATCACATCAAGATGGAGAGC
GAAGAACATCATGTGATCCAACAATACTAACAAAGCTCGTGGTACATCAAGATCATACCA
AATCAAGAACACGAGAGAGAGAGNNNGAGAGAGAGAGAGAGAGATTATACACATAGCAAC
TCGTACATACTCTCAGCCCCGAGGGTGAACTACTCCTTCCTCGTCATGAAGATCGTTGAG
ATGATGAAGATGGGTTCCGGTAATGATTTCCCCTTCCATAGGATGCTGAAAAAGGGCTCC
GGATGAGATCGCTTCAGAAGAGAGTTTTGCGGTGGTGGAGCGGAAATTCTAGGTTTATTT
TCGAGGTTTTCCCTATTTATGGGAATTTTTCAATGTTAGTTTCATGCTAGGGGGTGTCCG
GGGAACCCACGAGATCAAGGGGCGCACCCTAGGGGGTGGGCGCGTCCCCACGCTCGAGAG
GCGGATTGAACCGACGTCCCAAGGGTCCAGTCCACCACGCGATAACCACCCCACCCAATT
CATCTTCTATTATCATGTACATCTTCTCTCCTCTTTTATTCTTTCCTTCGCCTTTTCTTT
TTTTCTTTTTGTTCCTTCTTTTCCTTTTTTCCTTTTTCTAATTTAATGAAAAAAGTTCAC
CGAATTTTGTGTGATGAACCATTCTTCAAGTTCGATGAACTTTTTTCAAATTCAATGAAC
TTTGTCCAATGCTGATGATTTTTTTTTCAAATTTGATGAACTTTTTTCAATTTGGGTGGC
CTTTTTTCAAATTTGATGAACTTTTTTTTTCAATTTTGATGTTTTTTTTCAAATCCAATG
ACCCTTTTGTCAAATCCATGAACCTTTTTTGGAAATCGATGTTTTTTTTCAAAATCAATG
AACTTTTATAAATTTGTGTACTTTTCTGATTTCAAAAACTAGAAAAAAAATTCCCGAACC
AACAACACAATGCAACGAGAGAAAAATGCGAGCTAGTTGACCGAGCGAACTAACCGAAGC
AGGATAGAAACGAGGGAGCGATGGATTAATGGGCCCGTCCATGAAGGGGGGCACACGGGC
GCGAGTTGCTCCGAGTTTCGCTTAAGGCGCCACTTAGGAGCATTAGTGGGACTACTCATA
TAGCATGGAAAATCGGTCCATTTTGAATCGGTTTTGGGAACAATCTAGAAGCTTCTTTAC
TTGTTTTTTCTTTTTTCCTTATCCTGTTTTCTTTCTGGTTTTGCCCAATTTTATTTTTCC
CATTGGTTTTTATCTTTTGTTTCCTTTTTTCAAAAGCGAACTTTTTACAATATCAAGAAC
TTTTTAAAATTCACGAACTGTTTTTAAATTTATGAACTTTTGAAACTCGTGAATTTTTTT
CAAGTTCGTAAACTCTTTTGAAAGGCATGGCATTTTTTAATTCGCGATTTGTTTTTTGAA
ATCAATGGAACCGTTGTAGGCAGGTGCCGCACGCTAGCACAAACGTGGGCACAGATGCAG
ATCTGCTCCTTAGTTCAGTCTCCGGTCCATCTTTGCTGAGCTCACAACTGATAACAGATC
CTCCCAAATCTTCCACAACTTATACACTAAACTTGACAAAACGAAATTATATGCATGTGT
GAAGTTTGATTAAATGTGTGTCCAGTTATTCTGTAACCCAGTACATACAGAAAACGTGGG
CACTAGTAAAACCCCCCTTCTCTGGTAGGAGGTAACATCAGACAAGTTCCTCTCCCCCAT
GCGTGGCTCCATCTTTGTTCATTCACGAGGAGTTCTTGAGAACCCATTCTACCATGGTGG
AGACCCCGAATCCAGTCGCCGACCGGTTTTTGTGACTCCACACCGGGCCAGCAATGTCGA
TGTGCATCCACTGAACTTTCTCATCGATAAACTGCAACACGAGGAGCAGCTCTTATTTGT
ATTGTTTCATATAAATAAACACCTATTAATTCCAAGGAAAAAAATAGCACGCTATCTGAA
ATAGCGCACCTTCAAAAAAACGCTATGAACAAAATAGCGCGCTATTTTGCAAAATAGCGT
GTCACAAAACATTTCAGATTTCAGCATATAGCAACACAAATGACAGATTTCAGCAAAGGC
GAAAGAGGAGAGGAGGCTGCGAGCGGAGAAGGCGGCAAGAAGCGGTCGGCCATGGCTTTA
GGAGACGGGCGAAGCACCGGTGGCCGTCGCTGCCGCCGTCACTCGGTAGGTTTGGTTAGC
GATTTAGGGTTTGCTCGGTATGTCTGGTCGTCGCTATAGGTTTGGTCGTCTCTGGTTAGG
GTTACTGGACCGGAAAGCCCAAAAGAATAGTGGACTGATGAAAAATTCGTCTGAAAAAAA
TAGCGCCGCGTCGAAAAAATAGCGCCGATACGCACTATAGCACGAAATTGCCGTATTTAG
CGTGAATATCGCCATAGCGAGTGAACGTAGCGTTTAGTTTTCAAATACGCTATTAGCGTG
CTATAGCGGCGTTTTAGCGTGCTATAGCGGCGTTTTAGCGCGCTATTTTTTTCCATGATT
AATTCTATATGGCCAAGCATACAGCATAGCACAATGTTCAGGTTTCTTCCAAGAACCAAA
CCAGGAGTAAGTAATTGAACTGATCATAACAACAACCCAACACATCATACTATACACACC
TGCTTTAGGAATAGCGCGGCGGTGATGACGCCGCCCTGTGGAATAACGCCAGTGTTTAGC
ATATCAGCAACACCAGACTTCATCGTCTCCCAGTAGCTTTCTTCTAGTGGCAGCCTCCAG
AACTTCTCTCCCGACGCCTCGGATGCAGCTGCGACTTCCGCGTGGAGTTCATCACTTGGT
GTGAGAATCCCTGCAGAGATGCTTGTTTGAATATACCAAAACAACACGAGAACTGAATAC
AATTGGGAAAAGTAAAAAATAATTGCAGTTGGCAAAGAAGAGTGAAGATGGGTTAGTATT
TAGCATAGTTTTAAATAGCGGGCTATGGCAAATAGCGGCGAGCCCCTAAATCAGCTATAG
CGAAGCTATAGCGGGCTATAGCGGCATATTTGTACATGATATCATTTAGCGGCACCCTGT
TGAAAAGGCTATAGCGAGGCTATAGCGGGCTATTTAAAACTAGAGCTCTTTTACTGTACC
CTGTCACCAATATGAGCCGTCTATTCTCGAAATTCAATGGTAATGATCAATCTATACTGT
TCAATTGGGCTAGTCCCGTCGTCAAC
