Map Locations of contig_8380 (3410 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_8380

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79184 2 2611 bp AK363806 Available Available None





CDS Structure of MLOC_79184






Contig Sequence (3410 bp)

>contig_8380 3410 assembly3_WGSMorex_rbca.fasta
TCGATGATGCCTTCAAGAAGGAAACGGCGACAGTGCATCGCCATCACCAGCTTCAGCCAG
CTATCAAAGACAAGATTCTCACCCGGATCAGCAGCACGAGACTCCTACCGACAAATATGC
ATCTCCGAGACCACCTTCAAAGCCTCCAGATCCGACGACCAACCATAGCCGCACTGCCAC
TGCGGTGGACCCTAACGCTTCGTCCACTATCGAAGGGCGTCACCACTAGAACATGGAGGA
AGGGCGGCCACCCCACCGCACCAGGCAGGAAGAGCCGTTAGGAAGGATCCCAAGCACGCT
CTTCACAGTCGCTGTATTGAACGGTAACCAAAGTCGTCCGTCAGACACGGGCTTGGCCCA
CCTCCTCACTCCCTCCAACACAAGCCAGGGAGGAGAAGCCCGTCACCGCCGTCAGACACG
GGCTTAGCCCAGTGGCGTTCTCCAAAGGCGACGGAGAGAGGGGAGGACGAAGATGGCGAC
CCCAACGGCTAGTGTTTGGGGAACCACCGGAGTAGCCCGAGTCAGGGGTGACGCAGGGTC
GCGAGTTGTTGGTTTGCTCTTTACCTAGTTATTTTTAGTTTAGGTGCACATGCTGCTTGA
CTAGGTTAGAAAATTATACTCCTTTGATTCATATTACTTGTTTTAGATTTGTATATCTAA
CACTAAAATATGAATCGGAGGGAGTATATTTTTCTAGCGGACCGTCCAATCGGGAGTGGA
CCAAACATTCTCACGTTGCCATCGGCAAGTAGTACTGTAATGCCAAACAATGCTCAAAGC
TGTTCACGATGCATGGTTCTTTGATGCTGGCAATGCATGCTACCGGCAGTTTGAGAAAGG
AAAAAAATCAAGACTATATACAAAGAAGAAAATGGCCATTGGATTCATACCCGGCCGAAT
AATTACTGCAGATTCGCGGCGTGCATTGGTTCTTTATGCTTGTCATTTCGTCTCCGAGGG
AGCAATCTTAGCATTCAGCAAGAGGATGCAGTCAGTGGTCAGCTGTTCTTGGCCTCCTGC
AGCATCTCTACAGCCTTCTTCATCTTGGGCCGCTTCGCCGGGGCGCGCTCCGTGCACAGC
ATGGCGACCTTGAGCACGGCGAGCATCTGCCTCCGCCACGCAAACGACACGGTGCTCAGC
CTTGGGTCCATGATCTGCTCCGGCGTCTCCCCTCTCTCCGGCGCAGAGTGCACCCACTTG
ACAAGGTCCACACCCTCGCCGAACTCCTCGTCCACCGGCATCTTGGACGTCAGGATCTCG
AGCAGCAACACCCCGAAGCTGTACACATTCCCTGGTACAGTAACCTGCATTGAGTAGGCA
TACTCTGCAAAAATAAAAAAATCAAGTGCAATTTGTGTTATGGTTATGGATCCTCTGGCA
CGTTGAGTAGGTATAATACTCTGCAAGAAAGAAATCAAGTGCAATTTGGGAGAAAAGTTC
AGACCTGGAGGTATATAACCAAATGTGCCAGCAACCGCGCTGATGCTGGCAGTGCCCTTT
GAAGGGTCCAGCAGCTTGGAGATCTCAACCTCGCCGAGAAGGGCGTTGTAGTGTGAGTCA
AGGAAGACATTACCCGAAGAAATGTCGAGGTGGATGGTGGCAATCTGGTGGAGGAAGGCC
AGCCCTTCGGCGACACCCATTGCAATTGACAAGAGCTTTGGCCAGTCAGGCTTCTGGTTG
TCAGTACCATCGCAGTTGTCTGAATTGTGCAGCAGCTGAAGCAATGTTCCGTTGGGCAAG
TCATACTGCAGCAGCAATGCAACATCCTCGTAGATGACATACCCAATGGGACGCACAAGG
TTGGGATGGTTTACGTGCGCGAGACGCTCAAGCTCCCGGATCATCTTGGCCTGGTGGTGG
ACGACCGCGCGGTCGACCGACTTCAACTTCTTGACACACACCACCATGCCTGATGGCATG
ACAGCCTTGTAGGTTGTGCTGAACGTGCCGCTCCTCACTGCACTGGCCTCCTTGAACGTG
GCCTGGACACAAGTCTGGAAATCAATGGCCTGCTGCAAGCTCTCGATGAACACACTTGAG
GCCATGACATGCCGTGCTTCGACGACCACCTCTCCTGCCTCGGCCTTCTTTGCATCGGCC
TCCTTCTCCTGCCTCTCACGCCACATGAACAACGTTACCACCAACGATACCACCGAGAAG
ATGAGCACGCAGGACCCAGCAACTGCCAAAGCCACCCTGTAAGATATCTTCCTGTGGTCT
GATCCATAATTGGAACCATAAATCGGTCCACAGTCCACGTCCAGCGGGTCGCCGCACAGC
TTGGCATTGCCAGAGAAACTGGACCCTGCACTTTTCTGAAATGGCCCAAACTCCGGTATG
GCACCACGGAGCCGGTTGTTTGACAAGTTGACAACTATCAAGCTCAGCATCCCTCTCATG
TCACCAGGGATCTCACCAGATATCTCATTGCTGGATAAATCAAGCGCGACGAGCTTATCG
AGCCGACCAAGTTCTCGGGGCAGCGGCCCTAAAAGGTGGTTGAAGCTAAGGTTGAGCGCA
ATCTGTAAGCTCTTGATCTTGCCCATTTCAGCTGGTATCACACCACTCAGATTGTTGTTG
GCAAGCTGCAGTTCAAGAAGCCGGCTGCAGCCACCTATACCGTGCGGGATGCTACCCGAG
AACTCGTTGTGATCGAGCACAAGAAACTGCAACCTTGATCCGTTGCAGATGGCATCTGGC
AAGCCACCGCGGAAAGCGTTGTAACTCAAGTCCAGTTTGCTCAAGTTCCGGCACCGCAGA
ATGGACCTGGGGAACTCGCCCCCGAGGCCATTGCCGGAGATAATGAGCTCTTGCAGGTTC
CTCAGCTCACCAAGCATGTCCGGCACCTCGCCGACAAGGCGGTTGTAGGCCAAATTGAGC
AGCGTCAGGTTGGCGCAGCCTGCAAACTGAGCGGGGATACTGCCAGACAGCTGGTTGCTG
TCGGCCTCAAAGTAGGTCAGGCTGGTAGCATCGCCGATGGATGCCGGGATGGCGCCTGCG
AGGCGATTGTTGCCGATGCGCACGTTGGATAGGCCGAGGCACCGGCCGATTGAATCCGGG
ATTGTGCCGTTGAGCCTATTCACGGTGAGGATAAGAACCTGCAGATTACCAAGGTCGAAG
AGGCTGCTGGGTATGCTCCCCTCGAGGCTATTGGAGTGGAGGTTGAGCACTTGAAGCTTG
GACGAGAGGCCGAGCCCCGGCGGAATCGGCCCCGAGAGCGCGTTCTCGTAAGCGGAGAGC
ACGCGGAGGCCCGGGAGGCCGGCGAGCCAGCCGGGGATGGCGCCGGTGAGGTTGTTTCCC
GAAATCTGCACTTCTTGGAGGTCCTTGAGGCTCCTGAGGTGGTCGGGGATGGCGCCGGAG
AGCGCGTTGTTGGAGAGGTTCAAGAACTTGAGGCCGACGGCGCCGCCGAG