Map Locations of contig_8332 (4662 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_8332

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_79089 1 2703 bp AK367148 Available Available None





CDS Structure of MLOC_79089






Contig Sequence (4662 bp)

>contig_8332 4662 assembly3_WGSMorex_rbca.fasta
GCGAGTGAGAGATAGATCGTCATATCGCAGACTGGACAGGGTGTTATGCGCGGCGTGCCG
GCTCGCCGCGGCGGTGGCGGCGGAGCGCGCCTTCCTGTCGCCCGACGCGCTCCCGGCGCT
GGCGGACGCCCTCGCCACGTTCCTCTCCATGTACCCCAAGTACGCCTCGTCGGCGGACGT
CGACCGCCTCCGCGCCGGCGAGTACCCGCACCTCGACAAGGCCTGCCTCGACTACTGCGG
CTTCGGCCTCTTCTCCTACCTCCAGAGCTGCAGCCCCGCCGACTCCTCCGTCTCCTTCAC
GCTCTCCGAGATCACCGCCAACCTCAGCAACCACGCGCTCTACGGCGCCGCCGAGAAGGG
CACCGCCGAGCACGACATCAGGACCCGCATCATGGATTACCTCAACATCCCGGAGTCAGA
GTACTGCCTCGTCTTCACCGTCAGCCGCGGCTCCGCCTTCCGCCTGCTCGCTGAGTGCTA
CCCCTTCGCCACCAACAAGAAGCTTCTCACCATGTTCGACCACGAGTCCCAGTCCGTGAA
CTGGATGGCTCAGTCCGCCAGGGACAAGGGGGCCAAGGCCTACTCCGCCTGGTTCAAGTG
GCCCACCCTCAAGATCTGCTCCACCGAGCTCCGCAAACAGATATCCACCAAGAAGCGCCG
ACGCAAGAAGGACTCTGCTACCGGCTTATTCGTGTTCCCGGTGCAGTCCAGGGTCACCGG
GGCAAAGTACTCGTATCAGTGGATGGCATTGGCGCAGCAGAATAACTGGCATGTTCTGCT
GGACGCCGGCGCATTGGGGCCTAAGGACATGGACTCGCTGGGCTTGTCCTTGTTCCGGCC
AGATTTCATCATCACATCATTCTATAGGGTGTTCGGAGCTGATCCTACGGGTTTTGGCTG
CTTGCTGATCAAGAAGTCAGTGATGTCGTGCTTGCAGAGCCCGAATGGCGGGACGGGGGC
AGGGATGGTGCGCATTCTGCCGGTCTTCCCGCAGTATCTTAGTGATTCGGTCGATGGGTT
TGATGGTGTCCAGGATGGCCTTGAGGATGATATGATCATTCCTATCGAGGAGGAGTCGTC
GACGATGAACAGTCACCAAGCATCTCAATTACCTGCCTTCTCGGGTGCGTATTCCTCGGC
TCAGGTGAGAGAGGTGATTGAGGAGAGCGAATTGGACCAGGACAGCTCAGATAGGGATGG
TGCCAGCACGATTTACGAGGAGAATGAGAGTGTGTCCGTCGGGGAGGTGATGAAGAGCCC
AGTATTCAGCGAGGATGAATTGTCAGAGAGCTCTTTCTGGGTTGATTTGGGCCATAGCCC
ACTTGGTTCAGACCACTCAGAACAGGGGAAGTTGGGATCTCCACTGCCTGCATCCTGGTT
TTCTGGTAGGAAGAACGCAAAGAAGACATCACCAAAGGTGCCATCCAAACTGGCAAGGAG
CCCTATTTATGACAACCATGTCGTGTCCTTCGATGCAGCTGTGAGGTCAGTATCACAAGA
GCTAGAGCATGTGAAGGAAATTCCAGAGGAAGATTGTTCATACAATGGAAAGGTCAGCGA
AGATTGTTCATATACCGACAAGGTCAGCGAAATTGAAGAATGCCAAGATGTTCATGAAAA
TAAGAGGTTTGTAAAATTCTCTTGTGACAATGGGCGCACAGAAGGCAGTTCGGCATCTGT
TTTTGGGGGTTATGCTGCAAATGGGAATGGCTCCACTTCGGAGATTTGCTCAGAAAACCA
AGTTGAAGCTAAAGACAGTGCCATCAGAAGGGAAACAGAGGGTGAGTTCCGTCTACTGGG
AAGGAGGGAGGCACCGAATAGCAGATTCAATGGTGGCAGGCTCTTTGGAGTGGAAGAAAC
AGAACGAGTGTCAAGTATGGGGCGCAAGGTATCATTCACCATGGAGGATAGTAAGCTGTG
TCGCAACGCAGATGCTGGGGAGACATCTGGATATGCAGTTGGAGAAGAAGAAGAAGATGA
TGACTACAGCGACTACGATGAGATTCAGGATGGCAGGCGAGAACCTGAAATCATCTGTAG
GCACCTTGATCATGTGAACATGCTGGGTCTGAGTAAGACGACGCTAAGGTTGCGTTACCT
GATCAATTGGTTAGTGACCTCTCTACTGCAGCTTCGGTTGCCTGATTCTGGAGACGGTGA
TGGGGTTCCCCTTGTCTATATCTATGGCCCGAAGATAAAATATGAGCGAGGAGCAGCAGT
CGCATTCAATATAAAGGACTGCAACACCGGAACTTCGCTGATCAATCCTGAAACTGTACA
GAAGATGGCAGAGAAAGAAGGCCTCAATGTTGGCGTCAGTTTTCTGAGTCATATACGCAT
CATGGACATCCAGAAACATGGGGTGGCTGATGTGGGCCTCAGCTCTTCCCTGTGTAGGCC
TACATCAAACAGCCGGCACGAGAAGAAAAATAACAAAAATTCCATTGCTAGGATTGAAGT
GGTCACTGCTTCTCTTGGCTTCCTTACAAACTTTGACGACGTCTATAGGTTATGGGCATT
TGTTGCAAAATTTCTGGACTCATCATTCCTTGAACAGGAGAGGCTATCATCGATCCCCGA
GGATCCAGAACAATAGTGTTTAGAGGATTTCGGTTGTGGCTTTTTGCAGCATTTAGAGAA
TTCAGTTGTGGCTATTGCAGCTACTTTGTTATAAATACAGAAGGAAGGTGGTGGCGACAG
TGTAATTGTGATGAGGGGTGGAAGAAGAGATGTCAGGGCGCTTTTGCCTATAGCTTTTGT
ATCCGAAAATGTGTCTCCCCTTGGCATGAATGGTTAATACTCGGTGGCGCGGCTGGTATA
TTTCTTCATTCTTCTTTTCCCCCCTTTCTGGGCATGCGACTTTTTTGCTCGTAGATTTTG
GTCGAGATTCATGTGTATCATTCACCTGATAATTCCTTGTACTTGCTTGGCAAAGTGGCT
CCATTGGCCACGAAGTACGCTTGCCTGTATGATTCTTGCAACATGAATAGCATGATGATG
ATAGATTGATAGGTGATCCACCCACCCCTTTTCAGTTCTCTTTGTCAAACTTGAAATCAT
CCGCGGTTCTTTATATGTTTGTATGGATGTTGGTCAATGAGCTCTTCATGTTGTGTCTGA
TATTGCTGCCGCGGCTGATTCGCTGGTGCTTGATAACCATCTGAGCTCTGCAAGTGGTAT
CCAGAGCACTGGCTACAGGATTTGCCTTTCTTTCCTACTGTTCTTGGGTTTCTCCTTTTA
CTAGCTTTGATGTTGTGTACTTGCACTAAGCCTCTGTGTAGTCGTTGTTGTGTTACAGTG
GCGCGATAAGCCCGATCGTGCTGACTGGAAGCCTAGAACGGCCTGCTTCCTAGTGTGCTG
TTGCTTTCTTAAGTTGCAACTTTTTCTGTTGTGGTGCACTTGTAAAGGCTATCGACGGAC
AGTGTTGGTTGTTGTTGAGGTGGTACTGCTGGGTTTATGGCCCTTTGCGTTTCGGCGGCG
TCTGAATGAATGCGGCAGCGGTACTCTTGCTTGAGGAAGATGGGTTTCAGTTATGCAGCA
CCAGCAGCAGACAGATCTTGTTGTTTTTTAGCATGGCAACTGTATTTTGGAGGTGTTTTA
TCTGAACCACGACTTGCAGTGTGTTTTTTCTGCTTATGCGTGAAAGGGTCCCCGAAAGTT
TTAGATCATGGACTGACTGACCAGTAGACAGAGAAATGGAGACCCAGGCAAATGCTCCAG
AATACTGGTCACACCGAAGTCGTATCAGCCATGGCCCGTGAATGAAACTACAAAATCCTG
TGCGACTCGGCTTAAAATGACACACACCCCAATAACGTCAACGTCCGCGTTCAGGATTTG
ACACACGATGATGACGTCAAATTTAGTTGGCAAGCATGGTAAATTCATGCTCGGTGGTGT
GTTTTTTATCAGAAAATTAACGTGCTTGTCAACTAAACTTGTCATCTTCGCATCATCAAA
AATTATCATCGAAAACGTTGGGTTTGCCACGATCAAGTCCTGAATTTCGTAAAGCAATCT
GGTATACATCTTTCGGCCTAACAGGTGTCCGGTCAATGCCGCCGGGGTCAGGAATCAAAT
ACTTGCACGCCCCTTTCACACGCGCACGCACTTATTCCGCCCCACGACCTGCGCCCCGTT
GGTGTGCCTGTCAACGTTCAACGACGAGCAGCAACCCCCGGCCGTGCTGGTTGGTGCCAC
TGCCAACACAGTCACACACGCCCGCCCCAGCGCTGCCCCGCTCGAGTGGAAATCCAGCGC
GGCTGACACCACCACACGTCCGATTGATTCGGTGGTGACAGTGTGACACACTGACGCTGG
GCGGCGGCCAGAAGGCAAGGCTGTATTGCTTGGAGCTACAGCGAGATCCACTTATTCAGG
CGCGGTGACTGCTGGGCCTGGGCGAGATCTGATCTGATGAACTGCGGCTCACTGTGGCCG
GGTGACCAGAGGCACCGGATCGTTGGGTTGGAACGTACTGTGGCACCCCGCATCACCGCA
CAGAACGTACGAGGTATTGCTTACTTGTCTAGTCAATCCCGTCGGATCTTGCAAGCTGCA
ACTCGGTCTACTAGGAACGAAGGTGACCTGGACGGACCCGAGAGCTGGATATACTCATTT
AACAACGTTACTTGCACGTCTATCTGGCCATGGGCCGGGCCG