| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_83303
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_79085 |
1 |
1330 bp |
None |
Available |
Available |
LOC_Os03g41419.1, FRAME:+2, EVALUE:2e-34, 13103.m04459 protein serpin domain containing protein, putative, expressed |
CDS Structure of MLOC_79085
Contig Sequence (5838 bp)
>contig_83303 5838 assembly3_WGSMorex_rbca.fasta
ACTTGAGGCTCACTAGGGACAGTGTTTTTTCTATGTGTCCATACATGTATTTGACTTTCC
AATCAATATGATTATCGCATGGATAATAAACGGTTATCATGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTAGGGCATATTTCCAACATATGCATCTTGGTCCACGAAAT
GAGTCTACTCGGGCATCGAACCCAAGCCTGGAACATGTACCTGGGATGTCTGCCCCTGTA
GTGGGAGAGACGAGTCATGACGTGGAACTGTCGTTGTAGTACTAGGAGCCTCTCCCCACC
GGCTGGACCATGACGGCACCACACTCGTTCTAGATGACCTCGGTTTCGAAATGGTGTACG
CTCTAGTGGCAATGTCGTTCTCTGTACCGCATCTCATAATCTTTTTGGTGACAAATTCGC
CAATTCTTTTGAAGACATACACTACTTGAGTACCAATTCCCTGGGCTCGCATTCCTTCCC
TCGTCATTGCCCTTACTTCGTTGCAAATATCAATCTGAAAAAAATAGTTGTTGGTTGCTT
GAATTGTTCATGAAATAATGGACGTGAATAGCAAGATGTTGATGATTACCGTGGAGTCAT
GATAGTAAGCTGATGATGTGTCTATCCGTCTCTGTAACTGTTCCATATGCGTGGAATGTG
TTGGAATCGTAGGTGGTTGACACGTCAGCCTAGCACGCGTGCTCATGCGATACCAATCAT
AGTACGCTTGTGTTGTAGTTGCATCGTATAGTCTGTGTAAATAAATAATTACATCACCTT
TTATATGTACATAATTAAATCAACTTTTGTATGTATATAAATTACCATAAATAAAATTAC
CTTTGTTGATGCACTAAATTTTGTAGTGCTTAGTATTTCACTGGTTTATCCATTCAATGT
TTTCTACATTCCAATCGACACCACATCTACCCATATTGCTCATCCTGAAATTTACGTAAC
AAAACATAAATTTTATGAATTAAAAATACATGTACGTAAATTTTCGGAGGTCACATTTTA
CTTATGAGTTTCTTCGTCGATACATCTTGAATATGTGGTGGAATATCTTGATGTAGACTG
AACTGTCTCATGACACAGTCAGGATTGTAAGGTTCGACAAACCACAGATATAGTAAATTG
GAGCGAGTCATCCAAAATGCACTATCTCTCACGCATTTCACTGGGATGTGTTGCGAACCA
AATACCATTTCAATGTGTCTATGAGTCCACGGGTTCCATGTGATTACTGAGTCCTCAAGA
AACTCAAACTGATCATGGTATATGGGGTAACATTTTTTCGCAATTTTAGTAGACCATTTT
TTTCGATCGAGCGTCCACCGGTTAGACATAGTTACAACGCCAGCACCATAGTCATACGGG
ATTGCCGGACCTACAATCTGGGGTCATCCTACAGGTAAGTATTTCCATGACCACAGTTGT
AGAAACTCGTACGAAACACAAAGTAATGGAGCTTTAGCTGCGAATGAAGTTTTTTGAGTG
GCATCACACAACCCTCGATATGTGTGAGGAAGGATAGCAGAACCAAAGCTATATGTTGGA
TCCACAGGTAATGGTTTGTCCACTATCTTTGTGGCAAAGTAGGCGAGACCAGAAAAACTA
CCTCCCCGTAAGAATTCGGAAACATCACACCAAATAGACACAACAAATATGCGAACAAAG
TGTCTCTTCCTCGTCTCAAGATCAGCATAGCTAGATAAAATTTCGAAGTTAGNNCGAAGC
CAGCTGAGTGGGACACCTCGAGGCCGACCTGAACGATGTGATACGGGCATTTCAAGCCTA
AGACGTCCCAAGACATCTTCTGGCCAAGTAGGAGAAACTCGTGGAGGGACCACTGGCACA
CCTCTAATTGGTAAAGCTGTGATCATTGACACATCTTTGAGCATAGGTGCTAGATCTCCA
CAGTGAAAGTGAAAGGTGTGGGTCTCAGGTCTCCATCGATCAACGAGGGATGTCAAAAGA
GATGGGTCAGTAATGAAACTGCCCGGACGAGATGCGAGGTTCGCGAAATGAATGAGTCCA
TAAGCCTCTAGGTGACGAAGGAAACAATTTTGTACTATCCCGGGTGTCTTTAAGATTCAA
AGCCTGAAGGTCTGAGGAGGTTTTCATGATTTGGATTTAAGAAAAGTTGGCAACGGTGGT
GGGTGTCGTTATGCCCCTGCAAAAGATGGGGCATTTCGGTCATAACCTGCAATCACGATT
AAATGAAATTAAATATCTGAAGCTTACATCACGACGAAATGAAATTAAATATGTGAAGCT
TACATCACGACGAAATGAAATTAAATATTTGAAGCTTACATCATGATGAAATGAAATTCA
AATACATAGCATGAGTAAATATCATGTAGTGTTGTTGTTACAATACGGGCAATCCCCACG
CGAGTGCCCAAGGCACCTACAAATGCAACATCGCCTAGGTTCTCCCAACTGGTCGTGGTC
CATGTCATTGCGATGACGCCTAGACTAACGCCATCCCTTGGTGGTTCGCATCAACTCGGG
ATCACGAACCCATGTGGTCCCTTCTGACCACAATTGCTTGTAGTTCATATCAATGCCCCA
TGCCTAGAACTCACCATTCCAAGTGTTGTATAAATTGTGCATGTTGAAGAACGTTATACG
TATGGTTCGACACTAATTTTTTGATCTGCAGCTGCCCGAAATACGTGTCTGCAAGGGTAT
CCCAGAAGCTTGGGCTTGTTGCAATTGCACTCACACGAGGTTGTGCCAAATGTCACAGCT
TGTTTTTTTCCTCCTCTATGGTTACCCTTAACATACTTTGCTCGCACATTGACTTCCCAT
TTATTCCTAAGTGCATCTACCTTCCTGCACCCATGGCTTTGCAACTTCTTTGCTTTCTCA
TCAAGATGTCTTTGCATCTTCTCGGACTAGGGCTTGTTCAATTCAACTTTTGCCTTGGTG
ACGCTGGCTCTGTCTGTAAAGTATGACACAGTCCGGTTCCAAGTTTCATCAATTAGTGTT
GTGATAGGTAGGGCCCTCACCCCTTTCAGAACACCATTGTACACCTCCGACATGTTGCTT
GTCATTATACCGTACCGAGCGCCACTATCGTGACACTACGCCCACTTGTACAAATGGGGA
CAATTCTCGCTGATCCACTTGTTCAAAATTATTATTGTCCGACGACCCATCCTGTCTTCT
CTCTCTGGGAGGGATGCGCGCTCGATCTCACCATTGATACTTGTCGAGATAGCATTCATT
TTGGCTTCAATTTTTTGCATGCACATTCTCTTGAATAGCTTGAAGCAATCTTTGTTCTTG
AATTTGGAATAAAAATTAGCTGTCAAATGCCTCATGCACCACCTTGTCTCCAGATCGGGC
CACCCCAATCTCGATCTTATGAAGCCTTACTTATGTCGAGCGCGCTTAATAGTCCAGTGT
TGCGATCAGAGATGATGCAAACCTCTTCCTGATCTTTCACGACCCCATCTTCACGCAACT
CCAGGATCCTCTTTGTGTATTTGATTGGTCTCTGGTTAGACTTTGGGAGGCGGACATTTG
GTCCCTGGTACCTCGATAATTTATACATGGAATGTGGAGATTTGGTGGCACTCACACAAG
AACAACTAAAAATGCTTTTCATGCTCTAATTAAGCGGTTTCCTTTTTCTAGAAATTATTG
TTGCACTTCACCCAATATTTGAACTTAATGTGTTTCCTTTTTCATGCTCTGATTTGGGTT
GTTGCACTTTTTAGATGTTTAGAAATGTTTAGAAATGTATCATGTTCATATTTGATGTGG
TAATAGACTTGGAGTATATATAACTTTAAATTTTAGGAAGGAGCATATTTGGTGTAGTTA
TTATGAAATGTACCAACATTTGTATTTCAAATGGTTAATAGATTGTTATAATATTATTTA
TAATATTATTATTACAATATAATAAAAAATTGTATTATTCAAGACGTGCATTGCAATGCA
AGCTTACTAGTATATATATAAAGCTCGTTGGAAGTTCTTTTTCCATAAATAAAACTCTTT
TTTACCCAGGAAAGAAAAGCAACGGGATTTGTAGGTGTACGGCTCAACGGTCACGCACGC
ACAAGCGCACACGATACTCCGGAAGACCGCACACGTTCTTCTTTTCTTTTCCCACGAACA
AACCAACCCGTGGTTAGAAGGACTGTGGTATCCCCTGCTCATCAGAGTTTAAATTCCAGA
TTTGACACTCGTGCTTGCATTTTTCTGAATTTATTCCAGGTCTTTCGACGATGTGCGTTT
AGTGGGAGGAGACGTTCCCGTTGACTACGAAGACGTCTGTGTTCCCGTAAGACGTATGTG
GTGACTTCATCAATCTCAAAACGATGTGCCGGTTCAGTCTTTTGAAGATGCTCATAGGGG
TAGGGTGTGCGTGTGTGCATTCACAAGAATGAGTGTATGCTCGTGTACTCTGTTTAAAAA
AAAACTTTGTTCAGGCACCCGCCACATAACCAGCGAGACCCCTGAAACCCTTGAAAATTG
CACCCCCGTACATCCCCCTTTCCTCTCCGGTCTAACCAAAGTCCGACCTCCGACGAGCTA
CCACCCGGCCATGGCGACCACCGACATCCGCCTCTCCATCGCGCACCAGACCCGCTTCGC
GCTCCGCCTTGCCTCCGCCATCTCCTCGCCCTCCCACGCCAAGGGATCCTCCGGCAACGC
TGCCTTCTCCCCGCTCTCGCTCCACGTTGCGCTCAGCCTCGTCGCGGCCGGCGCCGGCGG
CGCCACGCGTGACCAGCTTGCTGCCACGCTCGGGGCCGCGGAGAAAGGCGACGCCGAGGG
CCTCCACGCGCTCGCCGAGCAGGTGGTGCAGGTCGTGCTCGCCGACGCGTCGGGCGCTGG
CGGCCCGCGCGTCGCCTTCGCCAACGGCGTCTTCGTCGACGCCTCGCTCAAACTCAAGCC
TTCCTTCAAGGATCTCGTAGTGGGCAAGTACAAGGCCGAGACGCAGTCCGTGGACTTCCA
AACTAAGGTGATCCCCTTCCTTGTCTAGCTACTTCTTGAAACGACGGCAAGATCCTTCAC
CAGAAAAAAAAACATATTAGTACAGATTTGCTCATTATTTGTGGACATCACTAGCTTGTA
TAGTTTATTTACTTGTATTTTTACAGTTCGCCGTGTCATTCTTTCTCCGAAAGTGCTTGC
TTTGTGCTGTTGTGATGTAGATATGCATATCTGTTGGTATTTCGGCTGTTTTGGTAAATG
CAATAAATTCAACTGAATGTTCAACTGCTAAGCGTTCAGGCTTGTGCAATTTATTACGTT
ATCAAGCTTAAAAACGTGACAGACTACCAATGCCTTGCCAAAAAAGTTCAATTTAATTAT
TGTAGTAGAGGTGCTCACTAAACAGTAGAAAATAATGGAACTTTGGAAATATTACTCCCT
CCGATCCATATTAACTGTCACTGCTTTAGTACAACTTTGAAGTTCATGTTCCTAACTTGC
TCTTTGGAGTTCCCCTTTGTGCGGATAATTTACACTTTGGAACTTGCATCAGTGAGATTT
TGGGATAGCTAGTCTGTTACTTCTGTGAGCAAATATACTCCTTTTTAGAAGTGTAATTTT
CATAATGTGCTATCTAGGGATTTGAAGCCTGGGGAATTTGTTGATATTTACATTTTTATG
CTCTCGAGCCTATGTATGTTGGATAAATAGGAATGTATAGGGCCTTCCAAATTCGTTGGT
CTGTATTTCAGTGTTTTCCGGGTCCTTTCGTGCTTTTCATTTATCACCTTCACGGCAATT
TTGTTTCTAAGAAGATCCCCCCCCCCCCCCCCCCCCNNNNNAAAAAAAAAACAAAAAAAC
CAAATAAAAAAAAAAAAA
