| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_83153
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_79059 |
6 |
2618 bp |
None |
Available |
Available |
LOC_Os04g51700.1, FRAME:-3, EVALUE:8e-16, 13104.m05279 protein DNA ligase I, ATP-dependent family protein, expressed |
CDS Structure of MLOC_79059
Contig Sequence (2827 bp)
>contig_83153 2827 assembly3_WGSMorex_rbca.fasta
GGTGTTAGCAGAATTATGATATATTTGTACAAGGCAATCACAGGTACCAATCCAGTGCAA
GATAATAGAGAAAATATGTCAAAGTTATTCAGATTTACTAATGTGTTTTCCATACTACAA
AAATTCAAGATAAAAGATGTGTACTGATTCAACACTTCAAACTTATTTCTGAAAGCTTTA
CTCTGTAGATAAGTGAACCGAGCTTTGTTTTTTGTTGACTCTAGTACCTATAAAGTTGAT
AGATGATAAACTACTGCACCTATATACATCCACCTAAGAAAGGACTGATGGAAGTCGGGA
TCCCAACTTATTCAAATTAGAGAAGTTCGATTAACTTGCACAATCCAGACAGAAATATGT
CCAGTCTTGGAACAGAAGGAAAGACACCAATATAAGCAAGAATTTACAACAAAGTAGACA
TTAATTATAACATAGCAGCTCTAACTATGTTGTTGTTTGCATATTAAAACCAGTAGTTGA
CCATAGACACAAATACAGAAGTACAATGCTTGAGATAAAATAAAAACAGAATCTATAAAG
CTTGGAGCATATGATATAGTAATTGGCATGCTGAATTTTTGCAGATAAGCATCAAATTGG
CAAAGATAGTAACAATACAATATTGGGTGAACTTCCTCAAACAATTATCTTCAAACAAAA
TGAGTATACAATTCTGACAGATCCAATCGATAAACATGAACTGGCTGTGTTTGGCCAATA
CGGTGACATCAATACATAGCCTGCAGATCCATCTGAGGATTCTGCACAAAAAACCAAAAA
AGGTCAGCTTATAACAACAATGAAAGCTATCTAACGGCAAGCATTGTACCAAACCAAGGA
GCACAGTTACAGAAAAAATACTGCAGGAGAGATGAAATAGTCAAACAAGGCATTCTAGTG
TACTACACTTCATAAAACCATAAGAATAATTCATGTTGACAGTGCATGGTATCAATCGAA
GTTGTACATATATTTTGATAGTGCATGGTATCAATTGAAGTTGTACAGATATTTTGACAG
AAACAAGGAGAAGTCATTGGATTGCACAGCATAGCAGAACAATAGTTTGTTTCCCTTTCA
TTTGATTTCATCACCAAGAAAAAATGATCAACTGTTCGGAGGCAAGACACACTAGAGATA
CAGATTCACACAACTCAATTTATACTACTTGTACTCCATCAGAGACAGACCCGCGGATAC
GGATGCGATTCCCTCCCTTTCCATGTAGAATGGAGCTAGCGCAACAACAGTTAAATTTTT
ACTACTTGTACTAAATTTAAATTGATTTGTTAAGCTACAACAACAACAGTTGTACTTGTA
CTGCTGGAATAATTAAAATGAGCTACAAATCTATTCATGAGCATGTGGTGTTTCTTTTCC
CTTCTTAATAATTCCGTATCAGAAAGATTGTCACATCAAAGAAATCTGCCCTATTAGCAG
AACAAGGTGGTAAACATAAGGGCATGTGTAGCAAAGAACTAGCATCACAGGAGAGAAAAA
CATACAACTTGCAACTATATAAGCACGACATATTCCTTAGCAAAGGATGCCCCTAGGACC
TACACAGATCTAGATTTACAGATACAATCTTCAATAACTAAACCCGGAATTACCACTGCC
ACGAACCTAACAGAAACATGCGCAGATGTGCATACCAACTTAACCACAAGGTACTTGAAA
ATGAAGGAACGGCAGTATCATCATTCGCGCAAAATATTCACTAGCATGCACATGACAACA
GCATCACCATGCAGAATTACCAGCACGCAATGCATCATCATACGCTACTGACGACCCCTA
AGCATCCGATCCAACTGCTAGGAACCAAGCGGACACAGACGCAACGCGTAGGGATACAAC
AAGCTCCTATCCTTACCATCGTATTACCCCAAATCGTTCATTCTAAACCATAACCTAGAG
TCCTAAACTGGAAGCTAACCCTCGAAAGCATACAGAGACCAGCTACCTACATTGCTTCTG
CCGGAAACCAGACATACTACTTGTAAGTTGTGCCACTTAGAGAAAGTTATGGTCAAAGTA
CATGTTATATATTGACTTAATTCCAGAACAAAAAATGCTCTGGGGCTGTGAAACTATGTG
CATATAAGCTGTTTGTGCTTCACCTTGGTGGCGTTGGCGGGCGTGAACATCTTGGGCGAG
GCGTCTATGAGGTAGACGACCATCTTCTTGTTGGCCTCCCTCTCCTGCATCCGAAACCAG
CACACGCGAGCATCAAAACAAATCTTGAAATAGGTAACAGATCTATCCACACACGAAGCA
GGCAGGAAGGCATACCGAGAGAGGGACAAGGGAGTGTAGGCCTCGTCGATGGCGACCTCC
ATCTTGGCGCTGCTCTCCTTGGGGATCTCCATGATAAAGTGGAACGCCCTGTCCCCGGCG
CGGAGCGGCACGTCGTGCCACGGGGACACTTCATTTCAAGGGCATTGGTTTTCTATACAA
AATGAGGAAGAACTTCTGATTTCTGACTTTCAGTCATACACAAATGCAAAGGAAATAGAT
GCATAAGCTACCTAGTATCACTTGCAGAGGGACGATCGAGTGCGTCATTAACCTCCTTTA
TTGTCAATCCACCAGAGGTCATTCCTTGCCTCCGCTGCAGCACCTGAGTAGAAAACGGAC
ATTATGTCAGCACCTGAGTAGAAAAAGGTCCCGACTATACCTCGGTGGCGACGAGGGAGA
AGTTGCCCACGTTGCGGCCGCCGCCGCCGCGGTGCCAGTTGGTGAGGCGGACGACATCGT
TGGAGTCCTTGGCGATGCCGAGCAAGCCGACGAGGGCGGCCTCCTTGAGGCCGTAGGAGC
CGCGCTC
