| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_82879
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78992 |
1 |
1022 bp |
AK355795 |
Not available |
Available |
None |
CDS Structure of MLOC_78992
Contig Sequence (5654 bp)
>contig_82879 5654 assembly3_WGSMorex_rbca.fasta
ACTAATAGACTAATAAGGACTCCTAGACTAATACTAATACTTCCTAACATTTACAAGGCT
TGTCTTGTTGCATGTGGCTTTAAGCAGGAGCATGGTCATGACCACGATGAGGCATTTGTT
CTTGTGGCCCACATGACCACACCCTTCTTGCTATGGCTTTCGCCACTAGTCTGTAATCAG
TTTAATGTTTACAGATGCTTTCTTAAGAGTGGCTTGGTGAGTTGTGTGAGAAGGTCAAAC
TGCAAATGTGTGTTTTTCTTGATGGTTCTCATCGCCTGGGAGAAAAGAAACAAAGCTGCA
GTTTCCCGTTCAGAGTGCAGACACTGAGTTGCAAGTTGTGGCTCTTTTGGCAGGAAATTA
AAAAGGAGTGTATCATCCAGGTATATTATTGTCATCAAAGGACAGATATAACCTAACAAA
TTGAACAGTCACATACTAGCTTTATCACGATGCTATATTAAATCCTTTTACACACACTTG
TTGCTAACTATTGCCTAACAAAATGAACGGTCAAATTTGTTGTATGCCTACTTCAAAGAA
GCTAACGCCACAGTTCTGCGTGCATCATATACATAGGTCTAAAATAAGCATAATTCTGAA
GTAAAACACTACCATGTGGCAAGCATGGTTAGCCATCACAAGATCGAAACGGGAAAAATC
AAATGCTAAACAACTTGCATACATATCAGCAAGAGATGATAAAATCATCAATACCGACAT
CGTGGAATTTTCATACCCATAAAGGTCTTGTAAGCCGTTTTTCTATCATTCACTTCTCGT
AAAGCTGCAGTTAACTTTACATTAATCTTCTGCAGTGATTGTTCTTTCTGCTCAATGTTA
TTCTTCTCTTCCTGCAGAAATAGGTACCATGAGAAAATTGATACAGTTCTTGCTTAGATA
ACAAAGATTAGTATACCTAGTGCAGTGAAATGAGATAGATGGTTCCTTGGAAAGGAAATT
GGGAGCGGACCTTTATGTCCTCCTCTAGTTCAGTGGTATCCACAGCAGCATGCCTATTAT
TATCAGCAGTATCTCTCTTTGCATCATCAAGTTGCACTTTTTTATTCATTAAACGTTGCT
CCTCAGGTCCTCGTTTTCTCTACAGACCAACATGGGTAGTTAATAGATAATTGAAATGAA
TTACACATCAATAAGAATTTTACCTTCAAATTTGCTATTTTCTGTTCAAGGTTACATCGG
TCATTAACTAACTTCCTTTTCTGAGCGTTCTTTTCTGAGATTATTCTTTGAATGCCGTCA
ACTTCATTCTTCAGTTTAGCTATTTTTTCTGCCGGTGAACTGCACCAACGCTCAGGTCTT
GGCCTTTTGTTTGGAGGAAGAATAGTCTGAACAGAACCCCTAGAAAACCTAAAAGAGAAA
ATCAATGGCAAAATAAAGTCAATGAATGAGCATACAGAAATCAGATATCACCTAGCATGC
TCATTTCCATAATTAAGCAAGTTATCTAGCAATTTGCATGATGCTTTATTTCCCAAAAGA
AGTTCATGAATAGAAAATGCATCAGTGAACTGTAAAACTGCTGTGGGAGCTGAAACACAG
ACACGATAAGGGAGCACTGCTGCTCCTCCGATCGGAGTTGCTCCTCCACGCTCCTCTTCT
ACAAAGAAGACGACCTCTGCTGGCAGCTGGCCCTGCAGCCCCGCGCCGGCGCAACCAGGA
CCTCTAGCCTGCCCATCCAGCCACCTCCAGCACACGCTGGATCCACTTCACAACAGCCTG
CCATCCAGCGAGCCCAAGCCCACACCGGATCCTGGGCTTGGGATCTCTTCTTTAACTTTT
CTTTGGTTTCTTACTCCTGATGAATGGATGCTTGTACAGATAAATGGATGATAGTTGATG
AAATTACAGGAGGAACGGATTTCAGGTTTAGCTGAGCGCTTGTAATCTAGATAAATAATT
GAGGCCAAAAAACCCATATGGGTTCTTGTCCATGTGACACTGTTCTTGCTGCCATGCTAT
GCATTTTTTAGGTAATTACATGTATGTGTAGCAATTTGGTGGCAAATTTTATTCACTTGG
AACTTAAAATACTTTACATATGGATGAAATTAAAAACATATGATTGAATACACCATCTTG
AAAATTTCACATCAGGTTCTCCAATTGGTTGGTAGGCCAAGATCGATGTTGGACGGCGGA
GCGGCTTGCCCGACGCGGCCTGCCACACCACCCCAGATGCCTACTGTGTGACCAAGCCCC
CGAGACTATCCAGCACCTGCTTTTGGCATGCCCATTTGGCCGGCAAACTTGGCACGACAT
CCTGGCCTGGATACGCATACCAGCACGACCCCCCACCAATGAACCTACACTATTGGACTG
GTGGCAGAGTGCGAAGTAGCAGACACCCGAGGCGCTGCACAAAGGCCTGCATTCCATCGC
CATGCTCGTCCCCTGGATGATTTGGAAACACCGGAACAAATGCACCTTCGACAACGTGCG
GCCCTCGATCGATGCATTAGTAGATAGGATCAGAGATGAGGCCAAGGGGGTGTTTGGTTG
CCTGGGGGGCTCCAGGCTGCATCGCATGAAGGAACCTGGGTGAGCGTGGCCTGGTTGAGC
TGATGCAAATATGAACCAAGATGTGTGTTTGGTGGACGGTATGATATGAATGCATGAGAG
ATGCTATAGACAACATATGATATTTGGTAGACTGCATTTGAGCTTAATTATGTGAACCTT
TTTCTTCCAATAAAAGATGTGTTTAATGAGATGGAATTAAACATGAAACAATCAGATTGC
AGGTACTAATTAAATCTACGAATGACAGCACTAACAACCTCAACCTTACATCCTGTCAAC
TCTCCTAGAGATCTCACAGATCCTACAGAACCCAAAGAAATATACTACAAGAATGTACCT
AACGATAATCTCGCTACAACAAATCAGAAACAAAAACTGTAGAAATCTAAAGATCAAGGC
TACGACATGAGCTTACAGGTGGTCATCAAAATCAAAGACGAAATCGACATGCATCCATGC
ATAGATGAGCATAGGTGGCGTCGCGAGCTCCAACTCTCGCCCGCAGGGCTGGGTGCACGT
GGCTATGGCGAAGTTTGGGGGCGTTGAGGCTGCGATGGAACCCGGCGAGTCGAGGCAGGG
AGGCGAGCCCCCGACGTGGGCGTGGAGGAGCGCCGGCGACGGAGCTTCGACCGATGGAGG
GCAAGAGAGCTCCAACCAGCTGCGCACGCGGGGGCTTAGACGACAGCGGCGACGGGTTGG
TGTGCTCGATGCCTCGATCTAATGCATGGGAGAGAGAAAGAGGATTGTGGTCGAGGCATG
GATGCAGCTGCAGGCCTGGCTCCCGGATACGCCCGATTTCTGCGTTCCCCTCGGCCTGGC
TGAGCGGGCTCCTTTTGCATGGATCGGGCCAGGCTGAGGACGCCGCGCAGGAAACCAATC
ACACTCAAATTTGCATGGCGGGTGCGAGCTAGGTGTGGGCCACTCATCCAAACACGCCAC
AAGTGTTGGGCACTCGCTGGGGCGCAGGGCCTACGGGTTGTTCTGCCCACATCCTGGGAT
GTCCACTGACCGGTCGCATGGCCCATGTATCACCAGCCTCTTAGGAGGATTGTACTCCCC
ATCTTTTCAATGAAATTAAACGCAAAGATCCTTTTGCATTTTCTCAAAAAAAAGTACATA
TTTAAAAAAGAATACAATAGCTCAAAGTATGTTAGTACATGAAACCATTCTATTAAATTG
GCTAAAAGTATGTTATTCCAATAAGCTTACATACAATAGCTCAAAAGTCAGTGAAAATTT
ATCTAAATCAGCAAAACATGAGGCTATTATTATTAAACCGGTACATAAACAGAATATCGG
CCTCCTAGGGGTTTAGAGTTATGCCCGGTCATTGGCAAACTGGCTGTCCGGTCATTGTAC
AACACAGCTCATGACCCAGACAGCCAGTTTGCCAAACGACTCCACTGCTCAGGTGCTCCG
AACAGGATGTCCAGTTCGCTGCTACCAGATTCACTGGAAGAGGCGTCGGACCCTGATCCC
GATAGAGCAATGTCAATCGGGCTTCCAGATCGCTCCAGATCACAATCGATTCACTCGCGA
TTCATAGAGAAGTGAAGCTAAATCCAAACGAGACAGCAGAATTGACACTGTTGCTGTCAC
TGCTTGATTATGCCCTTGCTGACGCTGCTCGATCAGACCTGCATTGCAGCTGTCTGAACA
TGCCTGTGCCGCCCCCGTTGAACTGAAACTCACTTGGTCGACCTTGCTGTTGGGTAGCCG
ACTAGCCGTCGATGACATTGCAGGAGGAACAGGCTGAGTGCTGAGAGGTTTAGTTGGGTT
GCCAGAGAGAACACGGTAAAAAAAGAAGAGAGAAAGGATGAGATCCTAAGGGGGGTGCCC
AGCCATCAAACTTCTCACTTTCTTCAATTCCTTCTCTTTTGTTAAGCTACAACCGTAAGC
TGGATGCCAGCCCTTCAACTTCTCTCTTTCTGCATTTTCCTTTGTGTTATTAAGCTACAA
TCTTCTGTGGTCAATTTGCTTGCCAGCCACTAATTCCTATATTGATTATCACACGACTAT
AATTTACCGCTTTGGGGACCCCCATTATTGGTTTGTGAATTGGAGCTGTATATACCCCCA
AATAAATCTATTTTTAGGAAGCAGCGACCACGAATCACAAATCAGTGGATTGTGAATCAG
GTAACTGTGGTTTTGGGGTGCCCTCCAAGTGGTCCCGTATGTCATCGAACCATTCCCCTG
CGGCTACCTTGGACTGCCTCTTGGCACTGGGAAACTCCAGAAAACTGATCTCAAGCCACT
AATCGATTCCACAAAATTGCAAGATCATCAAAACTAAATCTATAAGTGGGAATCTGCAAT
TACATAAACATGTGGAGGCACATGGAGATAGAAATGCCTATAGGATTCTAAAATTATTTC
TAGCAAAGGATTAATTACGGTAAACTACATCTAAACTGTTAGATATAACAAGTTAATTGC
TGGAATAAGACCAAACCTAATACGAGCAGAGTACCACCACCGAGACTTACATTCTGAACC
CATCAGAGGTATACACTTCCTTTATATTCCGCATCCTGTGATCAAATGCAACAGATTTTC
CATCTTCATAATCTCGAACCAGGACTTGCCTTTCAGCATGTCCCTGACACAAAGAAACTT
TAGTAAATATCTGCTGTAATAATAGTATCTCGAACAGAAGGATACAAAAACTAAGAGAAC
AAACAGTGTGATGCATATTGATATCTCATAATTAAAAACTATTTCATAATAGATATTCAG
TTTATTTGGGTTCTTCAATTCAAAAAAATTATCCATTCAGGGAATTAAGAATTCAGTTGT
TGCAACTTGCAACTTTTCCATCATCAACCCACGCCATTAATGGTACAAAATATATCAAGT
AATTAAAATACGACATTAAATAGGAGTAAGCATAGTCAAATTCCATTATATAATACTCCA
ATTTTGTGCCTCCTTGCTGTTTGGAGTAATTGGACCACTTTACTGAACCAACATAGTTGC
TTGTCTGCACTAGCTGCTAGCCTGCAAGCACCCTTCATGCTACAACGACACTCTCAAGAC
GCGGAAGGCCAATTCCAACCAGAGTGTGCGTGAGACGGTCCTGACTGTGTAGAAGGTGGT
TGCTCAGTGCGGGA
