Contig Data
morexGenes
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Map Locations of contig_82490 (9192 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_82490

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78915 2 1150 bp MLOC_78915.2 Available Available LOC_Os01g51210.1, FRAME:+3, EVALUE:5e-133, 13101.m05338 protein uncharacterized protein PA4923, putative, expressed
MLOC_78916 1 1314 bp AK248914.1 Not available Available None





CDS Structure of MLOC_78915






CDS Structure of MLOC_78916






Contig Sequence (9192 bp)

>contig_82490 9192 assembly3_WGSMorex_rbca.fasta
TTAACACTTCCTCCTCTTACTAATACCATAGAATGTTCTTGTATGCACAATACCTCGTAT
AAGTAGTGATTCCAAATCCAGAAGTGAATCGTACTAATTTCCTTTACGTAAGGCAGAATT
GGGTTTGGGGGTTTCTAGTGGAAAAGTCAACACAGAAGGATGAGTATGTCCTTGTTTAAA
TAGGTCCACCAGACCTTAGCTACTTAATTTCATGGTATTTAGCACGGACGATAGAAGATT
GGAATGATGGTATCAATGTGCCGCATTGAAATGAGAGTGGCTATATCACCATTAATCAAG
GTGGGATAGATCAGCCATCTCCACACATTGCTAGTTTGCTGAAAACAATCTAGCTTCTGC
CAAAAGAAAGCCAAACTCTCATCCAGATGCATCTCGATTCACATTTCTATATGATAATAT
GCACGACTGATTCTCGTATCTGTTGATACAAGAAATTCTTTCAAAAGAAAACCCTTACCC
CTAACCCCTGGGTGTGAGAAAGATGGAGACAAGTTGTTGATGCACAAGAGTGAGCAGCAG
TCCAGTCAGCCCTTGCTTTCTCAACTTGAGCAGGAAACTTCCAACCAAATAGGAGGGAGG
GGCACTCTCAAGTAGGAATGTAAACATAAAATGTGTGCTCTTAAATGTCAATTCCTCTTC
TAACCAAAATGACTAACAAGCATCCCTTCTATCTGGATACTGAATAATAAGAGAATCGTG
GATGTTATCGGAATCGGGGGCTAGAGTCTTTGGCGGAACATCCAAATATGATCGATTCCC
TGGGCTAGCAAGTATTGAATTGGAGTGGGGATTAGTTGGCTCGCCCTATGGTATAGATCG
ATAGATATATTTGATACGTCCTTTAACATGGAGAGTTGATGCCTGACGCCACTTTTTTGT
CCTCCAGGGAGGACTACACCATTTTCCCAAGCAAAATGGTGCCATTGCTTCTTTTTTTGA
AGAAAACAACCCGCTTTATTTCATATCATAATGTTTTGGGGGATACAAAAGGTTGTATGT
AGGACTATTAAACCAAAGATGACGAGATGTAGCTAAGGTAGTGGCCATCCTCGCTAGGTT
ATGTGCCTCCCTATTACTATCACGCTGCTCATGAACAAACTCGCAGCTCAAGAAGCTCGA
ACTCCTCTCTTGTATATCTTTTAAGATCATGCAATATTCTCCTCGGTTCCTTTGGCTTTT
CAGATCATTGATAACTCTCAAACAGTCGGATGCTATACGCACTTTCATAATGACCATATC
TTCTGCCAAAGCGATCGCCTCTCTGCATGCATGGGCCTCCAGCGTTGCAGGATCAGTGAC
TCCCTGGAAAACCAGCGTCGAAGCCCCAAGAAACAGCCCCTCATCGCTGCGACAGATCAT
GCCCACAGCCCCAATGTCTGAGGACTTCGCCACAGCCCCGTCAACATTTAGTTTGGACTC
ACCCGGTGTAGGCGGTAACCATCGTGGCACTGGTATTTTAAAACCTCCCATAGGGTTCTT
GATCTTACTCTCCTTGGCTGGCAATTCTCTCAGCTCATGCAAGTAGCGTTCAATGAACAA
ATGTGTAGACAAGGGGCTCTGGAATTCCTGCTTGTGAATCGCCTTGCGGCGCGCCTACGG
TGTAGTTAGAACAGTGAAAAACCTGCCTTCGCTCAAAGTGTTACACAGACCATGTAGCCA
GAGCTTCGGGTCGGTTGTCTCATCTCCATATACTGGCAGAATCGAATCATCATCATCGTC
TCAGAGAGACCACACACTCTTTGACATGTTACACTCTAGGAGGGCATGTCTCTAGGAATC
ACACGCGGCTTGGCAGATCAGGCAGCCAGCCTCCCCCGTCATGTGGCGACGCTGCCTTTC
TTGACCCGTCGGCAGGGACGCCCGGGCTAGACGCCATGCAAAAAATGTGAAGCTTTGCTG
GGACCTGCACACCCCATACTCCCATAGCTTCTTCCAGTTGCTCTCATGTTGGGATGTGTT
TGACGGGTCAATTTCTCCATCGAGCCACTTATCCCGCCTCGTTTTCGTTTCCATGACCAT
CCTGTAATAAGAGCGAACAGAGAACACTCCAGTTTTCTCATAATGCCAGGCATAGAAGTC
CGCTTGATTCGTATGGCTGAGTGGAATTTGGCGCACAATTTCAGCATCCATCGGCAGCAG
GTGTTCAGTCAAGGCTAGCTCATCCCAGCTTCTGTCCACATGTGATATAAGATATGTGAC
TTTGTCTGGGGGATTGGAAGACATTACATTGTATGGGCGCATACCGTAATCCCTTGGTAA
CCAATTATCGTTCCAGATGTTTGTATTCTCACCATCTCCAATGCGCTTGATCAGCCCCGT
GAGCAAAATATCCCTTCCTTCGCAGAGAGACCGCCAGATTTGTGATGGGTGGGAACCCAC
TTGGGATGACAAAATATTGGAATCAGGGAAAAACACCGCCTTAAGTATTCTCGCACTAAG
GGTATTAGGATCACAGAGAATCCTCCATACCTGCTTGGCAAGAAGTGACAAGTTAAAAAT
CTCCATATCTCGAAAACCAAGGCCCCTTTGTATTTCGGCATGCACATTGATTCCCATGAA
ACCCATGCTACTTTCCTTTCTCATGCCTTGCTACCCCACCAGAATTTTTGTATCAAAGAG
GTAATATGCTGACATAATCCCCTAGGTAACTTAAAGAGAGCCATGGAGTATGTGGGTATA
GCCTGCACCACTTACTTAATAAGCACCTCTTTGTCACTCCCAGCTAGGCACATTTCCATC
CAACCCTGAATATTCTCCCATACTCTGTCCTTAAGATAAGAGAACACACCATTCTTCGCT
CGTCCCACATTAGATGGCAGCCCCAAGTATCGCTCACATATGGTCTCTTTTTTGGACTTC
AAGAATTCCTTTGATTATCTGCCTCTGCGCCATCAAACATCCCTTTCCAAAGTAAATGGA
CGATTTATCATGGTTCATACGCTCCCTAGAAGCTTGGCAGTACGAGCTTAGAATCTCTTT
CAGTTTCAAAGCATTCTCTGTAGTATTTTTGCTAAAAAGCAAACAGTCATTCGCAAACAA
AAGATGGTTGACCTTTTGGGCGGTAGGAGCGATTTGGATACCTTCAAACAGCCCCTCAGA
ACTTGCTTGCTTTAGCATGCATGAAAGACCCTCAACCGCCAGTAGGAAAAGATAGGGGGA
GATGGGATCCCCTTGCCGAATACCTCTAGAGGGTTTGAATTCACTGCTTTGCATTCCATT
GAATAGAAGGGAGAACGATACTGAAGTAACACCTCTCATCACCTGGCGCACAAACAGCTC
GCAGAAGCCCAGCTTTTTCATGATGGCCTCCAAATATACCCATTCAACACGATCATATGC
TTTCATCATATCAAGCTTGACATCACAATGCCCATTCTTCTTGCTCCTGTTACTTTTCAC
AAAATGTAGACACTCGTATGAAGTGATAACATTATCAGTGATTAGACGACCGGGCACAAA
GGCCGATTGCTCCTCTGAGATAATATCCGGAAAAATCTGCTTCACGCGGTTAGCAAGTAC
TTTGGATGCGATTTTAAAAATCACATTGCACAAGCTAATAGGCCGAAACTGAGACAGTAA
AGTGGGGTTTTGTATCTTAGGAATAATGACAATGAACATCCTATTGATCTCCTCACGGGA
GTCTTCTCCCTTCAAAACTCGACTCACAACCTTGGTCACCTCTTCACCGCATAAATACTA
GTACTTCTGGAAAAAAAATGGATCGGGAAACCATCCGGTCCCGGTGCCTTATTAGGGAAC
ATTTGAAACAGAGCACTCTTCACATCCTCCCCTGTTATCTCCTTTGATAACATGTCATTC
ATTGAACTCGTAACCTTACAAGGTATATGAGATAACACCTCTTCCATCCCAATGACCCCT
TCCGATTCATACAAATTTTCATAAAACTCCACCGCCATTTGTTACAAGGGCGCCATTGCT
ATACGACGCAAACTGTGAGGGCCAAACCGCGGAAAGAAAGCTGCCTGAGACTTGGGCTCT
CCTGGTGCAATATGGGCCGCATGACCCACCAGATAAATCACGACATAATAAAAGGACAGC
CGCGTCAGAACTCCTTAACGCCGCCTTCATTTGAAGCTTCTCCCCAAGATACGATCCGAG
AGAGAGATAACACACGGCACGGGGGCTAGAAGAACGAACCGAACCCAAACACCTCCCACT
CCTCCTCCACGACGACCCCTTAACCCCATCCTCCCGCGCCCGAGCCCGCGAGGAGACAAG
CCAAAGCCATGGGCGACACCACCGCGCCCTCGCCGCCGAGGAGGTTCGGCAGGATCTGCG
TCTTCTGCGGCAGCAACTCCGGCAACCGCGCCGTGTTCGGCGACGCCGCGCTCGAGCTCG
GCCAGGGCCTGGTGAGTGTGTACCAATGCGTCCGAATGCCGAGGCCGCGCCCGCGCGCGC
CGAAATTCGACGCTCACGGTGGCGATTTCGCGGCCTTGCAGGTGACGAGGGGGGTCGATC
TGGTCTACGGCGGCGGCAGCATCGGGCTGATGGGCCTGATCGCGCAGACGGTTCTCGACG
GCGGCTGCCGCGTCCTCGGGTACCTCGCCGCCCCTGCTTATTCCCAAATATAGTACAAAG
CCGTGCTCCGCAGCCTTCCTAATGCGGCACCATCTCTCTCTCTCTCTCTGTTTGATTGTT
TTTGCAGGGTGATTCCAAGAGCACTCATGCCCCTCGAGGTGCGCACCAAATCCCTCTCTT
TCTTCCTCCTCGTGCGTAGAAACGCCGATTGCTAGCTACTCCTACGTCATTGCCGATTGC
CTGATTGGTCCGTTCGTTATCGTTAGAGCGAAAGCAAGAAGTTTCTGCCACGCAGTGAAG
TGGCAGCACGACTCAGCTCTCTGCCTAAAGCGAAACTTGCTACGGAATTCCGAAGCCGTT
CCTGACGGACGGGCCATCTCAATCCTACCATATCCTTTCGCCTGGCCCCGCATGTCGGTG
TCGCGGCTTTCCACGATCGCCTATACTAGTGCTATCTATCTCGACTGGTTACCCACTCAC
CATTTGATTCCCGTTTTCTGTTGGGTCCGGACCGATTCACCTTTGCTTGTGGGGTTACAA
ATGGGTGGGGTGATCATTGAGGAATTGGACTAGAATATGTAGCGCTGAAACTGCAGGCCG
TCCGTTTCAGACCCGTTTCCATACACACAAAAATGGACCGTCAGCTCGGTGGACTTTTGG
GCGGTACAACTTGGAGTTATAAAGTCGCCCGCTCGGTGGATGTAATAATAGTGTTCGATT
TGCCTGTGCCATGAGGTCGGTCGTCACAAGTTGAGTGAGAAAAGTAAGCAAGCAGTAGGG
TTTGAATTGCACCATTATACATATGTTATATTGAGGTGATGTGCAAGTGCTACTGTCCAA
ATATCTCTGAACTTTGTAGGATGGTGATAGCTAGGGGAAATCTGAAAATGATGTTCCTGC
AACTATATACATACTCCCTCCGCTTCCTGAATACAAGTCTTTTTAGGGATTCCATAAAAG
GACTATATATGGAGCAAAATGAATGAATCTACACTCAAAAATATGTATATATACATCTGT
ATGTATGTAATTCTTTGGTGGAACCTCTAAAAAGGCTTATATTAAGGAACGGAGGGAGTA
TATAGATAGCTTAGGTACTTGGTTGCCCTAACGAAATACCGAAAATCCTCTTTCAGATAT
CCGGTGCAAGTGTTGGAGAAGTAAAGATTGTCTCCGACATGCATGAGAGGAAAGCTGAGA
TGGCGCGACAAGCCGATGCATTCATTGCTCTTCCGGGTACGCACGACACGATTCTACACG
TTCTTCCTTAATCCTTCTGAATCTGAATGGTCTAATGTTTTACAGTACTACATGGTATGG
ACAGAATAATGAATGTTCAAACCAACAATGCTTACATGGTTATTACTTTGTGGACACCAG
GTGGGTATGGAACAATGGAAGAGCTGTTAGAGATGATCACTTGGTCGCAGCTTGGAATCC
ATGACAAACCGGTGAGTATTACGATGGCTCCCTTCGATCCATTTTAATTGTCGCTGATTT
AGTACAAAGTTGTACATTGTGGATCAGAGGGAGTAGTACATTGTGGGCTATTGCAAGTGA
CAAATGATTCTGCTACGATCAAGGGCTTTGTAAACTAATCCTGGCACACTGATCATTGAC
TTGAACAGGTCGGGTTGCTAAACGTCGATGGGTACTATGATCCGTTACTCGCGCTGTTCG
ACAAGGGCGCGGCGGAAGGGTTTATTAAGGCCGATTGCAGGCAGATAATCGTGTCGGCAC
CAACTGCCCACGAACTGCTGACAAAAATGGAGGTGAGCTGACCACTTTTAATACATATAC
GCGTCCTTGTTGAGTTTAAAAACGCCGGGTCTCGTTGACGAGCAGAAGGCGACCTATCAT
TGTTATTGTTTCTGATTGAATGATTCTCTTGGTTGTGGTCAGCAATACACCCGTTCACAC
CGGGAGGTGGCCTCGCGGACGAGCTGGGAGATGACCGAGATGGGCTACGGGAAAGCACCG
GAGCCGGAGGAGGAGGCGGCGGCATCGTAGCAATGCCTCGCCGATGCGTGTCGTTGTCAT
CGTCATCGATATCCCTTGGTGCTCAACTGGCCGCTGGGATTGCAATTGCAATAATCTTAC
GTAGTGCTCTCTTGTGATTTCTTCGTTGTTGGTTGCCTTTCATGTAACCCCGTAGTACGT
TGGATTGTGACTTTGATCTGGCGAAGAAGCCTAAGGTATTGTGTGCCTAGTTATTATCTA
CCCCCGTGAGCAAATGTCGACTGATAACCACCAACGTCGGTCCTCAGGTGAAGTGGACCA
ATCGGGCAGTCGTTTTCCTGGGTGTGAATGAATTATTGTGCATGCATCTTGCTGGCATCG
GTGCCCCTAGGGATGACATTATGGAACTGACACAACAGCGTTAATCTACAAGTTCCTTTC
ATAACCATCTTGTCAACAATGGCATGTTCAACCATCGCCCGATGGCCGCCTCCTCAAGAA
AAAGGGAGGAAAAAACCGCCTCGGCTGGGCTTGCCGCGTAGGCTCGATGCGGCCCAGTGG
GGCACCCCAGTCTAGCGGTAGGAAAAAAACATCTTTCAAAACGAAGGCATAAGATTTGTC
TCATACATTAATTAAGTAAAGAATAGAGTTTGAGAGTTCTACAATAACCCCAAGAGCACG
ACATGCCAATTACTTACACCTGACGATATTCCCTAATTGCTTAGTACCCGCGGTAACCTA
AAGATTTGCCTCGTCGCGAATCACCCTCAACAGAATTAGTGGTAGAGCGGCAGGAAACTT
ATTCACATGAACGTGATCCATCCTGCCGCCAAACAAATTGACTGTAACTTGTATAACCCT
ATCACGAGCATCCCTACCACCAAACAAGTTGATGGTAACTTGTACAACCCTATCGTCAAG
GTATCCGACGATAGATGCATACAAGCATTGTATCATATAACTAGATTTTTTTTACGGTAT
TGACATGTATTCCTATCGTTAAAGGCCTCGACGGTAGACTGGTATACCCTACCGCCGTGA
ACCCCGGCAATAGGAAAAGGATCAGATTTCAAAAAGTCCTTGAACAAGGCAGATCCAGCC
AAACTTTCAAAAAAGGGTCAAAACACCAAATTTTGCCTCCCACCACCTATTAGGCATGCA
TTTCGTGACACCCAATTTTTCCCCCACCAAATTTGGTCAATTAGGACACATCACGTCAAT
GCTAAATAAAGGGCATGGTTTGCAATACAACAGTTTCCAAAGAATATATCTAGACTCATG
CAAGAACATCAACCAAAAAAATTCTCCATCCCAAACAAGCCAAAAAAAAACATGCATACT
AATGCCATGCAATTTGCAAATGCTACAACATGAGAACAATGACAAGAAAATATGGGCTTG
CATGTGCAAAAAATATGCACAGCACAGACGTTAAAAGAAATTTCACCTTATGAACACATC
TCTAGAAACCCACAAGACATTTTTCGTCCGAAGGCACATTAATAATCAGAGAATGCTAAC
GGCCAAATTTTGTTCAATGAACCGATGAAAAAGTTCTACATGGTCAAGTTCCAGTTTCCA
AAGACAAGTCCTACAAGCTGCACCTGGCTGTGCCAAGACATGGTAACCGGAAGGAATATA
AATAATACAACAAACTCGACAAGTGCCACATAATGAATTATAAAGACATTTACAGAACCA
CCACAACCGCATCACATTAAATTATGAGAGCTACATTCATTCCTTGTGCCTCGGGCTGGC
CGCTTATTTACCGTGTCCAGGAGAAGACCATCATCATCTGGCAGTAGCACTCCTCACATC
CTCCTCGTGACATCTCCTGTGATCCAAAACTCAACAGGAAATGCTGTGCTTATCTCCAGA
TTATGATTTTATACAGAGCACATGTAGAAGTAGATTTTTTTTTCTTCGGTGCTACTAGTA
CTGAGCCCTCTCATCGCCGTCAAAGTTAAGACCTTCAATACCTTTCAGAGCAGACTCGTA
GTTCTTCGGGTTAGATGAGTGCCGGGCCGAAGAGGAACGCTGTGCTTCTGCAGAATCAAC
CGGTGGGCTCCTCTGAGGACCCGAGGTCCTACGGAATGCCCCAGGGCTTGCATCAGTCGT
GCGTGATCGTGAAGGCTCAAAAGTGTCACTTGCCACAGCATCCCGGCTGCTTGAAACAGC
AGCTCTCCTTGACGACCCGCTTGACCGCCCCAAAAAATTCGAGCCGGATATCTAAACAAT
AACAACAGCCAGAGTAAGAAGCTTAAAAAACGAGAAATGTTTCTGGGGTTCAAATTCATA
CTGCAGATTATGAATCATGATGTCATAAAAAACTATGATTGGGAGTCATCAATGAGGAAA
ACGCAACACTCCCAACCAAATGAGAAACAATAGATACTATGATTACAGAGTGATATTACA
AGTTTACAAATAAACACCAGCACTTGCACAATGCTGGAAAGTACACATGACACACTGATC
AGGACGCATCAAGTATTCAGCACTATTGATGTGCAGGGTTGCACAACAAGGAAATGGCAG
GTTATGATGACCTATGTGGGTCATTTTGTTAATAAGAGCAAGTCAAGGACGCTATTAAGA
AAAAATGACTACTGCACACACTGTTCCTATCTTGCACTAGAAACTGAAAAACTGCCCCCC
CCCCCCCCCCCC