Map Locations of contig_82108 (3535 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_82108

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78837 5 1834 bp None Available Available None
MLOC_78838 1 548 bp MLOC_78838.1 Available Available None





CDS Structure of MLOC_78837






CDS Structure of MLOC_78838






Contig Sequence (3535 bp)

>contig_82108 3535 assembly3_WGSMorex_rbca.fasta
ATGCCTTGTCGGCAGGGACGGCTGCGTGTTATATAGGCTCAAAGGCCAACCGAATACACA
AGGATTACATGAGATAGAAAGAGGTTAGGATTGATCTTTATCTACAAGAGAATAATAACT
ACAAAGATCAATCCCAACATTCTAACCCTACAAGTTTAAACACACGCATCCATAATTACA
TTGTCTAACAAGCTAGGCGTGCGCCCTGCTGAGGGAGTTGACCGACATGGAGGGCCTAAG
GGCATCTCCAATGGTTGTAAGATAATTGTTGTTAATTTTGACACATAGGATTTTTGATGA
TGTGTCTTGCAATAAATGAGAAAAGAGAGTAAGGTTGTATGTAAATTAACCAACACCCTT
GCACAAGCTCCAATGTAGAATGAGAGAGAATCTTATTTATTACCTCACATGTTTTTGAAC
AAACTAGATACAACCCATTGAACTAGTTGTATGTTAAGGTGTTGGCTGATGACATGGCAT
ATTTTACCAACAAGCTAACCAACAAAGTGTTGGAGATGACCTAAGGCCTTCAATCTTATC
ACCAGGATGATGGTGCATCGGGTGCTGCCGCCCCAGATGCACCTGTAGTGCATCTGCGTC
ATGGGGGGAGGGTTCGACCCCTGTCGGCTGTCCATGAAGGATCTAAATCCGGTGACCATC
GCGAGGTGGGTGAAAGATATAACCATCGCCAAGCTGTCGGAATAGGGATGGAGACGGGGC
AAGGACCCTTATGATCGAGGGCATCCACCACCCCTGGCATGTAGAAACCCTTCTCCCTTG
CTCTTTTTTTCTTCTGAATGGCTCTGACTGACCCGAAACCGGCTCGGCCACAGTTGTTTG
CGGAGATGCATGACTACAGGGAGCCACCGGCCGACAGGGAGGAGCGGACACCGAGGAGTT
GGAGGACCACGAGGACGTGGAGCCCATGCACCAGGAAGCCCGAGCCGGCGAGTCGGGAGC
CTGCGGGTCTGAGCCAACCGGTGAGTTAACCTTCCCTTATCCCTTGCGAGACTCGACGGA
TGACAGTTATCCTGAGCTTGGAGAAATTGCTAACATAGAAGACTCGGAGGCCCTGGAGGA
TGATGCGCCCGTGTCAAGGAGGCAGGTCCATAGAACCGGCCCCGTGCTGAGCTGCCGGCC
AGCTCCCCGCCGGTGGAAAAGCATGCGGCCGGGGCGCAACCGGGCGGCAGCCGTGAAGGA
GGGCCGGGGTGCAACCGGGCGGCAACCGAACGTCACACCCACACGCCCGATGCTGAGGTG
TGCGGTCCCCACGGTCGTCGGGTACGTTGTTTGTCTTGCTTTCTTGATTTCGGTTTGGTC
TTCTTTCCTTCATTTCTTCTTCTCATCCTACTTACCCCACCACGGAGGGCCGAGGCACGG
GAAACTACCGACGGCAGTGTCTAGGCACCAGGGAGGAACGCGGGGACCTAGGGGGATCGA
GAGCGCGCCTCTTGGAAGGTCCTGGACGCTGCTGAGTGGGCGGCAACGATGGAGGAGTGT
CGCCGTTGGCAGGATGCGGCGAGAGGGACCGGGACCAAGGCTGACCGCGTTGAGGGAGGG
GTGGACTACTAGGCGCATGGGAAGACAACCTGTCTGTGTCGCCACGACGCGTAGGGAGGC
TCTCAAAGTAGGTGCTCGACCCGGAGCGGCATGTTGAAGCCAACGGTGGTGCCATAGAGG
ATGTGCACGCGAGCGCTGATGTGGGAATGGCTCCCAACGACGACGTGCCAGATGTGGAGG
TACCCCCGGAAACGGAAGGCGACCACATGGAAGTCCCCGGCATGAGCCAGAATGATGATG
GAAGGGCCAGAGGAGGCAGAGCCGGCTCCCCGGAAGTTGCGGTACCCAAGCTGCCGGGAG
CCCCTCCGGCCAATCTGTCAGGCACAAAGCATCTGACTAACTTAACATGGCGATTTAGCA
TGCAATTCAGACACGAGGTGATGATCGGGGAGCATCTCTCTTGCTTGAAAAAGCGGAAAA
TCAAGTGTGGCGCGCTGCCGGCGGCCTAGGGTTCTACCCAGATATTCATTTACATGCCTC
TAAGGGCTCAAGAGAGTGGCTTATAAAGGCCAGTAAAGGAAAGGAAAAGCAAGAATAAAC
AATTGAATTAAATGAGCTCCTGTCGGAAAAGAAACAGTGACGCGGGCAACTCCTGTGGCC
GTCGGATGCTGGATCAACGCACCAGGACTCCTCCCTCCCGAAACGGTATCTTTGAATCAC
AACCGTTAGATCACCCATCCACACTACACAGCCAAAGCAGCACAAGGACACAGGGGAGAC
GATCTACAGAGCCTGACAATACCCCCCTGTTGAGCGGCAGCTTGCCCTCAAGCTGCGAAT
GATGAAAAGACTTTTTGGATGAAGGCTGAATCCTCCCATGTAGCTTGCTCCACTAGGATG
TTGATCCACTTGATCAACCAACGAACCACAGGCACAGATATGTCTCCTTGAACTCTTGGC
ACAAGCTTCTTGTCTAGAATAGCTTCAGGCTCCATAAGAACAATCCCATCAGACCGCACT
AAAGGCAGATCTTTGTATGGCACCACCTTTTGCCCAATGTGCTTTTTAAGCTGGCTTACA
TGGAATGTAGGATGCAGCTTGCATCCCTCAGGCAGAAGTAGTTTGTAATCATGTTGTCCC
ACCTTCTACATAATTCAAAATGGCCCATCGAACTTAGAATGCAATTTCAAGTGTCTGTGC
AGACTCAGGGAAGTATGCATGTATGGTTGCAATTTCAGATACACCATGTCCCCTACAACA
AATTCCCTCTCTTTCCTCTTCTTGTCAGCAAACCACTTCATCCTCTCCTGTGCCTTGATT
AAATTATGCTTAATGACCTCCATTGCTAGCTCTCTGTTTTGCAAAAGATCAGCAACATCC
ACAGATATAGAATCAGGCATAACAGATTCAACAACCATAGGTGGAGGAAAACCATACAGT
GCCTGGAACGGAGCCATGTTCAGAGCAGTGTGAAAACTAGTGTTATACCACCATTCAGCT
AAAGCTAACCAGTTGTGCCACTTCTTTGGTTGCAGGAAGCACATACACCTCAGATAATTC
TCCAAACACTCGTTAACTCTCTCAGTTTGTCCATAAGATTGTCGGTGATAGCTAGTACTC
ATGTGTAACTTAATCTTCAGTGATTTGAACAACTGCTGCCACACATTACTTGTGAAGATT
CTATCTCTGTCAGTCACAATCACTACTGGCATACCATACAGTTTGAACACAGTTTCAGAG
AATGCTCTACCAACAGATTCCACAGCAATGGGATGCTTCATGCCAATGAAATGTGCATAT
TTAGTGAATCTGTCCACCACCACAAGTATGAAATACTTGTTCTCAGAAACTGGTAACCCT
TCCACAAAATCCATGCGCCCATGAGCCCAAGCAAACTCAGGAACACGCAATGGTTCCAAC
AATCCATGATAGGGGCAATTTTCAGCGTTGTTGATCTGGCACACTGGGCAGGATTTAACA
AAGGCAATCACATCTTGTTTCAAACGAGGCCAATCACTACTGGAAAACAGTTTTT