Contig Data
morexGenes
Links



Map Locations of contig_8200 (3241 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_8200

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78812 1 205 bp None Available Available None
MLOC_78811 1 120 bp None Available Available None
MLOC_78810 2 1014 bp AK360084 Available Available None





CDS Structure of MLOC_78812






CDS Structure of MLOC_78811






CDS Structure of MLOC_78810






Contig Sequence (3241 bp)

>contig_8200 3241 assembly3_WGSMorex_rbca.fasta
CTGGAACACCTCTTTCAAATTCAGTCGCTGGACCTGATTCTCAAAGATGAGTGTGTACAT
ATGCTTGCCTTAAGATGGTCTCAACATTTCTGTGAAGACTATAGATCTCGCAAGTATAGA
GGCATCCTCTTTTCTACCCCTGCGGTCCCATTCAGGCTGATGCAGTTACCACCTGTCTAC
CAAGTTCTTCTAGAAAGGTTTAGTCTGAATCTTTTAAGTTTTCTGGTCTGTGCGTGTGCG
TGTGTGTTCAGTTGCTTCAGGAGCTCAAAAAGTAACATCTTACACTTTTATCCACTAGAT
ATGTCAAGATGCATTGCCCTGATTGTGGTTCAGTGCCTGATGAGCCAGCTTTATGTTTGC
TTTGTGGCAAGCTATGCTCACCTAGTTGGAAACCATGCTGCAGGTTAGTGTTTCAGATTT
TGTACTCCCCACTCCACGAGTGTTTGTTCTTCTGTAATTTATTAAATGTTAAACCTGTTC
GTTTTCTAATGTTTAGGGCCGGTAAATGCCTAAATCATGCGTCTCAGTGTGGTGCTGGTG
TTGGCATATTTCTTTTGGTGAGGGTATGTGTCACATCATCCCTCTTCATCCGATGAAGTT
GCTGTCAACAATTTTCTGCTTTTCTTTTGTGATATCAAAATCTTTCTTGTCGGTTTTGAT
AGTTGCTCTTTGCAGAAAACAACAATCCTGTTGCAACGATCGGCTCGTCTTGCATTTTGG
CCATCTCTGTACCTTGATGCCTTCGGTGAGGAGGTATTGGATTATAACTTACAAATGAAC
ATTTTTATTTTGTACTTGGGCCTTCATTTATCCACTCCGGATTTACTTCATCCATGCATG
GTTCCATGTCAGTACCTGTTGCCAAATCAACTGAAGAACGTAACTGAATTAATGCGAGGA
ACTTCTGCTACCAAATAATCGAGTGAACTAGCAACCAGTATTGTATAGATATTGTCTTGT
CTCTCGGTGGTCTGAGGGACGATATCAAGAATCCGACGACACTTAGACCCATAGTTTAAA
CAGGCGCGCCTAAGCGAGCGCTTAAGTGTGCCTAGGCTCTAGGCGATAGCAAAACGCCTA
GCGCATAACTGCGCTTAATCTGCGCATAATTGCGCATAAACATGCGCTTTGGTCAGAAAA
GCGCAAGGCGGTGGCAAAACGCACAATTAACGCCTAGTGCTTTTTTGAACTATGCTTAGA
CCGCAGTCTGCCGCAACACCACCATCGTAGAATATGCACCTTGATATCATGCAAATATGA
TTTAACCTTGTCGTGCAATAGTTGACATTGAGGGTTTGAGCATTGCACGTAGTGAGTTGC
GTGAGCTGCCAGAGACTTGCCGTTAATCTTTTGAAGCGTGCCTCAATGTTCCGTTTCCTG
CCTAAGAAAATAAATGTTCCATTTTGATGGTTACCTCGTGATACAAAGCTATGAAGTATA
ACACCTCGTGATAGTATGTGCTGCCAAGTGATGCAGCAAACAAATGATACGACCCAAGGC
AGTTGGGATTTCCTTTTCTTTTTTATAAGTTACCTTATGTACCTTTTGGATGCAGGATCA
TGAAATGCACAGAGGAAAGCCTTTATATCTTAGCCAAGAAAGATATGCAGCCCTCACATA
TCTGGTAACAGTCCCCTTTGCTTATCCTCTACATTTTTCATGGTTCTACGTTCAAGATGG
GATAACATGCTCTCTTTTGATTGGCTAGGTGGCATCTCATAGCCTTGACCGGACTTCTGA
AGTTCTGCGGCAAACAACTATCAGCTTTTATACATCTGATTAAGCGCATTGTTTTGAGGA
ACAATGCCCAAAGGTTTGGATAATGTACTGTCAGCTCTTAAGATTACGGAATACTTGGAA
ATGCCGTGAAGCATTGTGTGTTTTCCAGGATTAAGATAACTGGCATATCACCCATCCCAT
AGTAGCTGCTGCTGTTACTCTACTACTGTTCTATTCAAAGCATATGGGTTCAGAAACTTT
TTTTTTTACAACAGAGCCCATACACAGTACTCCCTCCGTTCCTAAATACAAGTCTTTTTA
GAGATTTTACTAGGGGACTATATACGGAACAAAATGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATCCGTATGTAGTCTTTTAGTGGAACCTCTAAAAAGACTTCTATTTAGGAA
TGGAGGGAGTACATGACAACAATGAATATTGGTTTCACATAGTCGGCTAGTTTGCAAGGA
TATATTCTTGTTTACTGGGGTCTGTTAATGCCGCTCTTTCCATTTCGTTAGCTGTTAAGG
CTTATTATAGGAGTATATTCCCACCATTTATGTCTGCATTTCTCTCCGCAATGCGAACCA
TGGTTACCATGTTGATCTTGGTGTAGCTGTTTTATTGACAGGATCATGTGATGTGCATAT
TTTCTGGAACTGTCGTCTAGCTTCATATTCATGCTTTCCAGTGATAGCGAATTGCATCCA
TTCCTAAGGTGATAACCACAACATTTTGTTTTGCACATGCATGTTGGCCACACGTCTTTT
CTCCTTCATTTCCCCTTTCTGAAACTTGTCTCATCCAGGTGTCGCGGATTCTGCCAGACT
ATCGAGCCATGCTTCGCTGCTTCAGACCTCGTTCTCGCGCACAATGTACAGTGGTGCCTA
TGATGTCCCTTTTGTCTTTATTTTTCGTTCTGTTAGGCTGTGATTGGATGGTTGGTTGTA
CTGTTCACATTGTACAAATTCATTGGTCTGAAGTTCGCCGTGGGAAACTATTTGCAAGCA
ATGTAGGCTAATTAAGCTGGTAGCTTTTGGCGTCATTTGCAGGGTCATGCACTATGGCAC
ACCTTATTTTTTGCTTGAAAGTCCCCCACCAACAAAAGAGGAATAATTTGAACAATAAGT
TTTTTTTAACAAAAATATTAATTGAAGAATCTTGCATGCAAATAAACTTGATAGTAGTAT
GTGATCCAGACAAAAGCCAGTCCAACCCTTTTTTGAATAAAAGTTGTTTCCCCCCACCAA
ACAGTCGAGGAGGTTTCTATCAAGCTGATTAGTGCAGAACCCTTGTGCATTCCTTCCCCT
CGCACCAGTTTTTTTCGTCATGTGATCCTTAGCAGCTTGCCTCTTCGATGATGATCTAGG
AGTAGGGGACATCTCCGTAGAAGTAATTGGTTGCCTTAACTCACTAGCGTCTCATTTGGA
ACAAGCTCTTGGTGAAAAAGACCGGTGTGTAGTCTGAAAAGCGCCTATGGAAGATCTACT
A