Contig Data
morexGenes
Links



Map Locations of contig_81969 (3266 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_81969

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78806 2 793 bp MLOC_78806.1 Available Available LOC_Os03g60400.1, FRAME:-1, EVALUE:2e-98, 13103.m06626 protein 40S ribosomal protein S23, putative, expressed





CDS Structure of MLOC_78806






Contig Sequence (3266 bp)

>contig_81969 3266 assembly3_WGSMorex_rbca.fasta
GGGGACGACGACGGACGAAGAGTGGTGGCACCAGGTGGGCGAAGCGGGCGCAGGGGCGAG
GGCGGGCGCGGAGCGGCGCCGGTGGGGGGGGCGCGGGGGGGGCGGGCCGGTGGAGGGGGG
GGGGCGGCCGGGGCCGGTGCGATGGGGAAGACGACGGATCCCGGCCGTTCGTCGGTCGGG
AAGAGAGAGAGGAGAGGACGCTGCGGGTGGGGCCGCAGCAATGCCGGTGGACCCCCGGCC
CGGGCGATTAAAACTGCTGTGGTGGGCTTCGGAGGGCTTTTGGGCTCTCTTCTCCTGACA
GGAAAATTGATGCTTGGGCTTCACCATAATGCTGTTTGGATCTATCTTCGCCTTTTAACA
CAATTCTCTATTGCACACTTTGTCAATCATCAAATAATGCATACATCATCCACAAGTTTA
CTTTCTTAATTGATAATAGAGCTAGTCGACCATTTTACTAGGGGATTTACAATCATAGCA
AAACCAATTATTTCATACCCTGCTTTGGCAATGCTTGAAGTGAATGTTCCGAGTCGCCGT
CATCAAATCCAGAGTCTGACTAAAGGCGCGCTTGGAATGAATGTAATTCGATACGGAGGT
GTTTCACTTACACGCGCGCTGAGCAATTTATGTTTGGAAAAGAAACGACGGACCGATATG
TATATTATTTACGGAGACGTATTTCAAAGGAAAACAGCGATCCAAACAGGGCCTAAGGCC
TCATTCCATCAAGTTTTTCATCCAAGCATGCATGAGTAACTTCAAACAATCAGATCCAGC
CAGCAGCTACACTATGGACTTGAGCGATAGCAGATTTAGAACAAAGGAGCACGCACCTGC
GTTCTTTCAATCTTCTTGTTTTTGGAGAAACTGGCTCCATTAGCAAATGTCGCGCAGAAT
ATAAATTTTCATCAAATACTGAGTATACAGCTTCTTTCGCATGGAACCTTGTTTGTTCGG
ACTTCAGCTTCGAGAGAATCAGCTGCCCATTTACTGTGCTGGCAAACCGTAATTAGATTG
AGGCTGATTATTCAAAGCTGATTCAAAATAACTGTTTGTTTCAAATTCAGCTTTGAATCT
GGTGCCTAAAGCTGAAACAAACAACGCCAAATTCTACATACACCGCCAATGTAATGCCCA
AGGGAATTTCAGGATAAGGGAACCATACTCGTCTCAAACTGGGGAACAAAACTCATAACA
GTAGCACTTTCCCTTAACAGGAGCAAAATGTGACAAGGCATAGTCTTCACAAACACGATC
ATAAGTTATCAACTTAAAAGTGCTGTAAACACAAAGGAACCATCCTCCTTAAACATCTAA
AGGCCAACACACTGTCTACTCCATGCTTGCCACCAGCCAAGATGCTCACAGCAATCTAAG
ACCTGGGTTTCTCCTTCTTCTCCTTGAAGAGGGCAAGCAGAGACACACCAGACACCTTGA
CGACCTTGAACCGGACACCAGGAATATCTCCCACAGCATGTCCCTTACGACCGAATCCAG
CAATCAACACCTCGTCCTGGACAACAAGTGAAAGACAAACTTAGTACCTACAGCAGAGAT
GTAGAACATACATTTGAGAAGTACAAGATGGGGAACATACATTTTCCTCGATGAAGTTCA
GGCAACCATCATTGGGAACGAAAGCAGCAATCTTCTTTCCATTCTTCACAAGCTGGACAC
GAGCACACTTACGGATGGCAGAGTTAGGCTGCTTGGCCTCAATACCACTGCAATAGAGTC
ATCATATATTAGCTTCACCCCATAAAACAATGGTAAGAAGAAAAACCCATTGTGCATTTC
AACATACATCTTCTCCAAAACAATGCCCTTGGCGTGAGATGACCCAGCGAAGGGCTTCTT
CCACTCGTTACCCAAGTGGCTCTTCTTGTATGCCTTGTCTGCCCACCTCTGGTTCCTGCG
GTGGGTCTTGAGCTTGCGCCCAGCTCCCATACCACGTGTCTTACTGCAATGCAAACAATT
CACGGTTACCACAGCAAAAGCAAAACAACATAACCAACACCTGGCCTGCATCGCAACAGT
TTGACATTGGATTCATTCAAAATCAGAAGATGAAGGTGACGAGATTAAAACATGGTTATA
TGATTCCTTAATAACGATTTAAAGGGTAACATCCATCTAAAATGCTTAGTTGTGCACACA
CTTTCATATCATTTAGTAGAACAAAATCTCCTAGTACATGTTGAAGTAATTACTCAAAAA
GCATGGTTAAAAGTAACAGATTTACTACTGAATCAGGATGATTTCTATCGAAGTGTATGC
TACCACGCATAACCTCCCAGATCCAAGTTTTGGACCAAGAAAATATGACTACACGGCAGC
AACGAATTGATATCGCTTATGAATATGTTTAGTGCTGGCGTTGTATAATCTGACCAGCAC
TTGACCGTCCATAAGCTCGAGGAGCAGCGACAATCTGCCCGGTCTAATCTAACCAAAAGC
CCACGCCGTGCCTCTAAATCACGCGGTACTGAAGGCAGAAGACTAGACCATTCCAGATCG
CTAATCCTAGCCAAGAAGGAACCATGGAAAATCAACCGGAAGTGTGTGACGGCGAGCTTA
CCCCATGTTGGCGAAAGGGCTGGGGAGAACTCCGACGAGGCGGCGGCGGCGGCGGCGGCG
GAGGGGAGCGGGAGCTGGGAGCGGCGGCGGCTGCAATAGGGAGAGAGGGATGAGGGCGAG
GAGGCGAATATATTTATATGTAGACACTTTGGTTCCTACTAGGGTTTGCTTGTGGGCTCG
CTGCTTTGAGATCCGTGATGGTTGATGCAGCGACGGTCCTGATGCGGAAGAGGTGAGGGA
TAGGTACGCTGGACCTGGTCTGCCACGTGGACATATGGAAAACCCTCTTGATGCTTGACC
CGCAAACTGATCTCGAACGTTTTCTCATCAACTTTCTTTAGGGTGTGGTATTCCGTCGGC
CAATGATAATCCCACAAGATCGACAGCCCGAACTACCGTTTGATGAAGAACAGATAGCCA
TTTGATCTCTTTTTGTGAGCCGTTGAGCCTTTGCAGTATGAGCCTTATTGTGATCTTTCA
ATATACTTTTTCCTTTTTAGATATAAGTTTTTTTTTTAAAAAAAAAATACTAGGGACTTC
ATACAAAGCAAAATAAATAAATCTATACTTTAAAATATATCTATATGCATATGTATGTAT
TTTACTAATGAAATCTTTAAAAAAACTTATATTTAAGAACCGAGGAAGTATGTTTTTTCC
CTACTAGAAAAAGGGCCCGTGCGTTG