| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_81924
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78796 |
2 |
554 bp |
AK250553.1 |
Not available |
Available |
None |
CDS Structure of MLOC_78796
Contig Sequence (5538 bp)
>contig_81924 5538 assembly3_WGSMorex_rbca.fasta
GAATCTACACGCTAAAATATGTCTATATACATCTGTATGTAGTTCTCTAATGAAATCTCT
TAAAAGACTTATATTTAGGAACGGAGAGAGTAATAATTTAGACACGTTACTAATCTATTC
CATGTCACTGTCCTGCGTAGCCTAAGATGCAATGGGTTTCATCCAACGGTCGCGACGAGA
CCACGTGGGACCTCTTCCTCGGCTCGTGCCCACGAGCAGGTGACCCAGGCGGCTGGGTAT
TTTTTTTTTGAGCTGCAGGCGGCTGGGTATTGACTTCCCCTACTTGTCATGGCCTTGGCC
CCTTGGCCTCCTTCGCGGTCTCTCTCCCATTCGCCGCCTCCGCCGCCCTCCTCTGCCCGC
GCCATGTCGTTATCCTCTGTCTCCGCTGCGTCGCAGGGGAAGGTGGGTGTGGTGCAGATG
ACCTCCGTGGGGGACCTCGACGCCAATTACGCCACCTGCTCCCGCCTCACTAAGGCAAGC
CTTCCTCCTTTCCCCTATAGACCTAACCCTGCACCGCCGCGAGCATGGAGTTGATTGCCT
GCTGCGATTTGAAACTGGAAGAAACATCTAGTTGCAGCAAGAAGGAGATATGCAAGCTTG
TAGTTACCAGACAATATGTTTTGGCTATTGAAATGGAGAAATTGTAGCATTTCATCTCGG
AAAAGCTAGGAAGAGGAGAAATTCTGCATTTGATATGCTCTTCTGGGATCTGGAATGCAC
GAATAGATGAATTATAACCATTGTTTATAAGGTGGTAAGAGCATCTTTAGCAGACCACAT
ATCAAGCTCCGACCCATAAAATAACCGTTAAAATACGGTTCCGCGTGAAAAAAGTTACCC
GATCAGATCCCGCAAACGCGTCGTGTCGGACTCGTGGCGGGTGCGTGCGTGCGTAGGTAG
CTGCAAGCACGAGGGTGTCCATGCCGGTTGCGTAGCGTGTGCGTGGAACTAGTCCAGGCT
GTTGGCGAGTCGCGCGGGGGGATTGCGGGCGTTCCGTTGGAGCTCGCCGTGGGCCGCGCC
CGTTGGAGCACCTCGTGGGCGCGAGCGGAGCGTGCAGATCGTGGCCGCAAACGAGTGGGA
GGTGTGGGTGCGTGCCCTGGCGCCGGCTCGGGTATAAAGTCGGCGCAACCATTGTTGTAA
CCGCTGTGGGGTTGAGTTCGAGCTCAAGAAAAAGCCGTTGTCGCGACGGAGTTCGTGCAC
CGGAAAAACAACCACCGTGTCCACCTTTCTCTTCCTCCTCTCAGGCGGTGTCTGCGGCGA
CCGCAGTGCGGCGGTGGGTCCGTTTTGGCAACAATAATTGGTATCAGAGCCACGTGACGA
AGGGTGATCACCAACAATGTCGCTTGTCCCGTACACCGGCGGAGCGGGGGGTTCGTTGCC
GATGTAGGTGCCGGCGCTCACTGGTGAGAACTACACCACGTGGGCTATCAAGGTAGAGGC
GAACTTGGATGCTGCCGGGCTCTGGGAGGCGGTGGTGCCGGCGGAGGACTCGGCACCGGC
GGTGATCGCGAAGAAGGACAAGCCCGCGTGTGCCTATTTGTTCGGGGCTCTCTCGTAGGA
CCTGTTGATGTAGGTATCCCCGAAGAAGACAGCGGTGGAGGTATGGGCTTGCCTGAAGAC
CAGGTTCGTCGACGCGGTTGGCCACACTCCGCGGCGATTTTGATTGGCTGCGGATGGCGG
ACGACGAGTCCCTAGACGCGTTCGCCGACAGGATCGGGAGCATGGCGGCGCGGTACGCGG
GGCTTGGGACGACGCAACGATGATCAAGAAACTGCTTGACACGGTGCCGGATCACCTATA
CGCGACGGTGGCGGGCATCGAGCAATTTTGCGATGTCGATGCCATGCCGTTCGAGGAGGC
GCTCGGATGGCTCAAAGCCTTCGACGAGCGCACACGACGACGCTCAGGCTTGCGGCGAGC
GCGCGGAGGAGCAGTTGATGCTCACGGCAGCGTAGTGGTAGGCACGAAAACGACAGCGCG
GCGGCGGCTTCAACCACGACGACGGCGGCAGCAGCCGCCGTCGAGCAACGGAGGGAAGCG
ACGCGACCAGTGCTACAACTGCGGGGTGTGCATCCATTTCCATCGGGACTGCACGAAGCC
GAGGAAGGCGGAGGTAGCGGAGCAGGCCCTCCTCGTCGACGGCAATGTCGAGGACGACAT
GCTCCTCTAGGCTGTGGCTTAGGGGTTTGTGTGTCGGGCATAAGCCACGCCGACCGTGCG
TGTGCGAGCGGGACGCGTTGGGCTCGTGGCGGGTGCATGCGTGCGTAGGTAGTCGCGAGC
ACAGGGGGTGTCCGTGCCGGTCGCATAGCGTGTGCGTCGAACTAGTCCAGGCGGTTGGCG
AGTCACGCAGGGGGATTGCGGGCGTTCCCGTTGGAGCTCGCCGTGGGCCGCGCGTGTTGG
AGCGCGTCGTGGGCGCGAGCGGAGCGTGCGGATCGTGGCCGCAAGCGAGTGGGAGGCGTG
GGTGCGTGCCCTGGTGCCGGCTTGGGTATATAGCCGGCGCGGCCATCGTTGTAACCGCTG
TGGGGTTGTGTTCGAGCTCAAAAAAAGCCGTTGTCGCGGCGGCGTTCGTGCGCCGGGGAA
ACAACCACTGTGTCCACCTTTCTCTTCCTCCTCTCAGGCGGTGTCTGCGGCGACCGTAGT
GTGGCGGCGGGTCCGTTTTGGCAACCACACGTCGGGTCCGTAAATATTTTTGCGGGGCGC
GGTGAAATTCCCACCCCAACCCGCGAAAACGCAGGCTCTCCCCCTCGCCCCGTCGGTGCC
CTGTATATAGCGAGAGCGGTTGGCGGGTGGTACATTTCAGTCCGCGCTTTTCCCCTACCC
ACCGCCGCCGGGCTGCCGCCTACGATTCCATCCATACCAGCCGGCGGGCCGCCACACGTC
CGGGATTGACCTCTACCCCTTCCTGTAGTTGTAGATCGGCGACTGTTTGTCGTGCCTGTC
ATCTGGCATTTCCGGCCACCAGCGGCTGTGCCAAGCCATGGATTAGTCGGGGACCAGGCC
GCACAGCCTCGGCAAAGCGCCAACACCGCATGGAGGTACTGGTTCGTCCTTTAGTCGCTG
TCATCGGTTTGCCGACAAGGACTCGGCATGCCGTCGCTCGGGCTCGGTGCTCGCGCAGCG
GCTCGCCGGCTNNNNNNNNNNNNTCATACAGTGCGACGACTGCACAGAGATTGTGCTGCG
GCTAACATCTAGCACGCGGCAACACCTCAGATGGGTATTCTTCAAATGCAATAACGACGG
GTATGTTCTTGTTTCCGTTCGGCTTTGTGAACTTATTTGGTTCAATTTCGGTAGCTTATT
GAGATGTTCAAGTGTGTAGGAAGGTGGATGCTCATTTTGGTATTGGGAAGAAGAATACAT
CGATTTATTGATAGGAAGAAATTTAATAGATGTTCGTGCACTCCTTAGTATAATTGAGGC
TAATGATGCGGCTGCATGTTCAATTAGAATAGAAATCAGAGGGGAAGCAACGTCTAATTC
TTTAGAATCAAAGCCGAAGAATGAAGAATGTAAGATCAAGAATCCACAGATCAACAATGA
ATGCATGGAGAGGATGTTGGTCCAACTAGTGTGAGCAATTATGGAAGAGCAATTATGGAA
GTTGGATATCTTCTAAAATGCCTAATTATGATTCTTGTTTTCTTTGGTCTTGCTATTTTA
GCAAATATTTGGTGAATTATTATGTATCCAATGCCTTTGAAGAAAATAAAGAAGCAAAAA
AAAGTGTTTTCATGCTTGAAATTGAAATGGAAATTATTGATTTACGAGTCGGCGGCGGAG
GACGGCCGAGCAGACCCCGCAAACCGGACCCGTAAAAATGATATTCCGAATATCCTTTTT
TACCGGTCCGGTTTGCCGGCCCGCAAAACCGTTTTTCCGCGAACTGTAAACGGCTTTTGC
GGGTCGGCGATATACGGGGTCTGCTAGAGATGCTCTAAGGCGACCTAAGGCGGGCACCAC
CTGCCTTAGCGCCTAGGCGACGCCTAAGCGCCTAAGGCGGACATATTTGTAAGGCGCTGC
CGGGGCGCCTTATCGCCTAAGCGTCTAAGGCAGGACGCCTTAAAAACAATATAAGCAAAG
CTTTCCAAACTGAGTTCTATGCTATGTGTGTGCTGCACCTATCGGAGTCCTCATTGGTTT
TATTCATTGTACAACAAGTAATGCTGTTCCTTTTTGTTTCCCTACTTTATTGCAAGCTCT
CATAGATAAATGCATAGTAGACCATCATTTGAGATAATCTTTTCTTAGGAAGCTGCTCTG
GCTGGAGTCAAATTTCTTTGCTTCCCTGAGGTCTTCTCCTTCATAGGATCCAAGGATGGC
GAGTCTGTTAAGCTAGCCGAACCATTAGATGGCCCAATAATGCAGAGATATTGCTCACTT
GCAAAGTTAGTAAGAACATTTTTCTCAATTTATGAGCTTTCTCACTTGTACTGTACTTTG
TAGTGACTAAGCCTTTTGATTTTCCAATCTACTTCGCCTACTAGCCTTTGACACTATTAG
CTCTTAGATTTAGGAATAATTGTTTCACACTGGTCTAACTTAATATGTATCTTACAGATG
GATCTTTCTAACTATATATTCAGCATGTGGTTTTTTACTTTGTACGCCTTGTTAGCTTAT
ATAGATAAGTACACACGTGTACGTAATGCTCCTTCATTAACTATCTGTTGGCACAAAAAA
TCCTTGCAATTTTGAGGTTTCTAAATGGAGTGAATCAGCATGTCGAGCCCTTATCATAGC
TTCATTCTGCAGTGAGTCAAGTATGTGGTTGTCTCTTGGAGGGTTTCAAGAAAGGGGCCC
AGATGATTCGCACCAGTACAATACTCATGTATTAATCGATGAATCTGGAAAAGTTAGGAG
CTCATACCGGAAAATTCATTTGTAAGTTTCTTTCACCGCTCTTGGGAGAAACTTGCTTTC
AGTAATATTTGCGAGAAACTTGCCTTCGGTAATATTTGCGAGTACTTTATTTTAGCTGCC
TATATCTGTTGAGTTGTTATCATACCTCTTGAAGTGTATATGTGGATTGCCTAGCTCTTT
CCATCAGATCGGACTTTTGGTTGCGTTGGCTAGNNNNNNAAGCTTAACATGGTATTAGAG
CCTAGTTTTAGGTCTCCTCCGGCGCCGCAACTCGCCTGTGGATCATTTTTTTTCTGGCCT
TCTTTCGACCCAGCGATGCCAGATTGATCGAGTCTGCAAGGACCGCCACCGCTACTCCCG
CCCAAGACGTGCGCTGCTTGCCGCCTCAACCAGTCGCCACCAACATCTATGCCCAAGCCG
CTCCACCTGCTGCTAGCTCCAGGCTGCTCGGCAATCCTAATGGAACTGGCGGCTGCCCAG
GCCGCTGCTCCCAAATCCGGAGGACGCCTCTCCAGGTCTGATCGATGTCGCCAGCTGCCT
GCCCGTTCACGTGCTTGCTCTTCGTACGTGTTCACCTGCACCCCATGTTGCCTGCTGGTG
CTAGCTGCTACTCGCTACCACCTGGTGTTGCCTGCTGCTACGTGGTGCTACATGTTGCTA
GTTGCTTACCTGCGGCTA
