morexGenes - Barley RNA-seq Database

Contig contig_8192

Source Contig contig_8192

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_8192 (2500 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_8192

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_78794	4	1711 bp	AK361571	Available	Available	None

CDS Structure of MLOC_78794

Contig Sequence (2500 bp)

>contig_8192 2500 assembly3_WGSMorex_rbca.fasta
GGGCGCGGACGGCGGCTGCCACGGCGCCGCCCGGGAGGAAGCGGCTACGGGACCGCCAGC
GCGCGCCGCCGCGGTCGTCGTAGGTGACGTGGATCTCGCCGGACTCCGGCGCGTGGCGGC
AGGCGTCCGGGGTGTAGTCCACGGCGATGCGCGCCAGCGGCTCCGTGCCGTCCGGGCGCA
GGTGCTCGTGCTGGTCGCGCTCCGACGCCATGGTGGTTGACAGGAGAGCGTGGAGGTGGT
CGGGTTTTATTGTGCCGCTCCGGCAACGTGCGCCACCGCCCACATGATGCACGCGAGCTC
TGCAGCTGCACGAGTATTGGAGTCGAGTAACATGAAGAACCATGTACGTACGTACAATAA
TGAGCCAACTTGCTATTGTTATGGATGAGAACAAACGACATGAGAACCATTTGCTGCAAG
AGTAACATGAACACCATGCAAGAAATATTATCTTGGTTACACATGACAACCAAGAAAGGC
TGGATCTACCTTACAAGAACAATTTGTCCATGACAGAACATTTCAACGTTTGCAGCTATC
CCGTAGCAGATAGGGAAACAAAAATATGTAAGATGGAAAAAAATAAAATAAAAACGCAAC
TGTGCAATCTGTCATTGCACTCACAAATGCTACAATGTTACTCGCAATAATTTCCACAAG
CAGGAACGAGAACAAAAAAAGGCTGGATTTACCTTACAACAAATATTTGTCCATGGATTC
AGCTCGGCATGAATGCAGGTTCAGGCTCAAGTTTACATGGCTGGGTGTTTACAACAGGAG
GTCACAAATCATCAGACAGAAAAGATAAGATGCTACAAGTATCCCTCAAGCAGCAAAGTT
CCATTCACCTCCTTGTGCTCCACGTTCTTGAGTGCAAACGACTGGCTGCCACCAAACGCC
AGGTCACTCTGCCCAGGGCTCACCATCCAGACAGGAGAGAGCTCCAAGACAACCTTCTGC
ACCAGCTTGTCCTCCTGAAACTTGCTCAGCAGCGACGCCAGGACGCCTCCGGCATCTCTG
AAATCCACCAGCACGCTGCATAACCCTCGATCAGCGAGAAGTTGAAGGATGGACTCTAGG
TTCATCTGATCGAGGACTGAGACGCTGACTCCCGCTGGCTCCACGGTGACGGGACTATCG
GCAAGGACTATGGCGTTAGATGCAGACTCTTCGTCAAGAAATGGGATGTCCAATTTGGAA
CCTTCTCCCTGCGCTATGATGATGTAAAGAGGCTGCTTGGCGCCAGCCTCGCGTGACATT
GGTAAGGCAGTCGCCTTGGCCATGTCGCTTGAAATTATAACCCCGTCGTATTCTTTCGCT
AACTGTGAGTAGTATCCTCCTGGTTGATCAGTTCCGCTCCCAATTTGGTTTATGACAATT
CCATTCATCGAGAGTGTAGCTCTGGTTTCAGTGTAACAGATAAAACATCAGCAGCAGCAC
ACATGATATTCAGACAAAAAGAACCAACGAACATGATATGCAACAGTACAAAATATAAAC
ATCACCACACTAAAATGGCTGAAGCAATGAGTGTTCTACATTTTCCTAATCGCAGTTGCA
AAACACAAATATGTAGTTGGATATTTACCTCAAAGTTGCAAAGGCCTTCCCAGTAAGCAT
GCGATGAATGTAAGCCTCATTCAATCTGAGGCATAATGCTTCCTCCACACCAACCCTCAC
ATCTATCCCGGCATTTCTGAGTTTTTCAATCCCTTTGGATGCTACAATAGGATTTGGATC
AGTCATCCCCACCACAACCTCCTTAACTTTGGCTTTGATTAGTGCTTCAGAGCAGGGAGG
GGTCCTCCCGTAGTGGTTGCAGGGCTCCAAACTCACATAAGCCGTTGCATTCTCTGCTAA
ATCCCCTGCATCTCTCAAAGCAAATACCTGCACACATGGCCACATAGTTATACTTTGCTA
CGAGGCTATGATATTATCCGCACCATTGTACTTTAGTGGCCCAATTTCTTATGCAGGTAA
AAAACATGTGTTCCCTTATGCATGTACCTAATAGGGTAGTTGCCTAATACTACGATGATA
CTAACTATTATTTCTTCATGGTAGCATTAGCTGAGATCATATTGTTGTGTATGACTGAAA
ACCACTGCATACTGTTGACATACCGGCAACAAGTGATATTTCCGAAATATTTGTTAGACA
GCAAGATGTGGACAATTTATGACATAATGCAGATTGAATAACGGCGCTAGTTGCTTTTAC
TAAATGGAGTAAACTATTAGTGAAATTAGGCATCATATGAAGATTGTGAACTGCTATCAG
GCCAGGTTACTAGTACGGCCACACCAAGATTAGGGGACTGTTTACTCAAAGATTAGGGGA
AGCCATTCCATGCTCTGCATTTTAAGAAAATTGACAGATGAGATAGCTGTTAAATCCCCA
CGCTTGCACAATCTTTCGTAGTCTAAGAGAGTGAACATCAAATTGAGAAGAAGTGTGAGA
GGGGCGACCTCGGCGTGGGGCTGGCCGGCTTTGGGGTGGA