Contig Data
morexGenes
Links



Map Locations of contig_8154 (3399 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_8154

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78704 1 568 bp AK364340 Available Available None





CDS Structure of MLOC_78704






Contig Sequence (3399 bp)

>contig_8154 3399 assembly3_WGSMorex_rbca.fasta
ACTTTCTTCGGTAACTTTCTTAAAATTAGTGAGCTTACTTTAATAAAAATATTTAGAAAA
ATCGAATTAATGAACTATTTTTGAAAATCCATGAACTTCTCATCAAATTCTATGAAAGTT
TTTCAAATTTAATTAATTATTTTCAAAATCAATGAACTTTGTTCAAATTCGATGAGTTTG
TTCCTAACTCAAGGGACTAGTTTTCAAAATTGATGTATTATGTATTCAAATTTGCTGAAC
CCTTTTTCTAAATTCAATGAACTTTTCAATTCAGTGAATCTTTTTTTTCAAATTCGATGA
ACTTCTATCAAATCAGTGAAATTTCTAAAATTTTGTGTCTTCTTTTTCAAACTTTAAAAA
AGTCAGATCTATTTTTGAAAAGTCAATGGTCAAATGGTTGACCTAGCAACAACTGACTGG
ACGACGCTGAGTGAAGGAAATAGGGTCGCGATTGAGTTAGGTGTCTATAATTTGTTGTCT
ACTCAACGTCTAATTTAATTACTGAGTAAAATACACCACGATTGCACTAATTATTCATCT
GTAAGAAGAAAATAATTCTGGTTGTAATTGTGCTATAACATGGACAGCTATACATGCTCT
GTTCTTTTTCTGATTATATTGTTTCTGTTCTTGAGGACTTGGCAGCACCAGGAGCGGAAA
TCTTTCACTGGATAGTAAGGTAAGGGCTGAGAGATTTGTGGATGACAAGCACGTTGATCA
TAGAGCAGAGCAGTGTGCCAGGTTGAAACTGACTGAAGGGAAACACACGGGTACATACAC
TAAGTCTGTCTAACTGCACAAGCTTGACATCACTACCACAATGGTATGGAGAACAAACCC
CTCTCAAGAAAAAAAAACTGAGATCAAGGACACAATAATTGAGACCAAGCTTCGATGTCT
ATGCATAATTGGCTGCCCTACATTAGTGAAATTGTGTAAATCAGAGGAGAACAAGATGAA
GATTGCTCACATCCGAGATAATCTAATGTATGCGCCTGCCAAGCTATCTGTTGTAGCATT
GCTTTTATTCTAGCACTGACTAGTGACTGGTCCTTTTTCATCCGCAAACATATGTAGTAT
ACTCAAGGCATGAGTATCTCTAGATAGATAGTCATGTTAATATGTCGGATTAGGTGTCTC
ATGCGTCTAGAGTAATGATTTAAATACACTAATTATTCTGAATGTAGTTTTTCCTATGTT
GAGGACTTTCTCTACGGATGCTCCGTACAAATTACTGGCCGGAAACACCAAGTCGAGTCA
GATGAACAAATACATGTAAGAAGAAAACAAGATGAAGTTGGGGAAGGGACAAATACAAGA
CGTGATTGTCTAAAGTTGAGGATTCAGACCTTTTAATTCTTATTTGCAGGGAATCAGATA
AAGAAGACATGGAGGAGAAATCCACCTGCTGGAGTTGGAGAATACACATCCATCACGCCG
CCAGCAAGTGAAAAAAAAAACTCTGTTAATTGTTTTTCTAAAAAAAAACTGTTATCAAAA
CTGCCCTTAAATTTGAAGTAAATTACTCTTCGCCACTTGTGAAGTGAAAAACTGAGTGTT
ACTCTGAATTATTTGTATATCATAAGGCCCTTCAATTTTTCATCCATCATGAGACTGGTC
TATTTTTCCTTCTCATACACTTATCGAGGATGTACTACAGAAATACACGCATCAATGATC
AAGTCCAACATCGATGCATTCTGAGCATGTTAGAATGCACGTGCCTTACATCTCCATGCA
CGCCGGTTGGTGCATAAATATTTATATATGTGTATATACAGAGAGTGCGAATATTAAAAC
TTGATTCGAAGATCACGATTTTTATTATCCCGTTGCGACCCACGGGCCTTTTTGCTAGTT
CAGTATAGCAAAGCGTTCGTTCGTGACTGATTATTATTTTTCAATAAACAGAGCCCTCGT
TTTTCACTAAACAATCTATATAGATGTTGGAGTTCCTGGGTGCAACTTTAAAAAACAAGA
ATACTAAACATGTTTTTTGTCGGTGAGAATACTAGACATGTTGTATAACAATATGCGCAT
TTGGTGGCTTTGGTGGACATTGGACTGAATCCATCAGCGGAAGGGATTTCGCTCTGTCGG
GGCAAAAGAATTGAACTGCCGAACATGTGGTACATTCATACTAGCCAGCAAGGATGTGCC
ATTCATTCGTCAGACTACTGCAATACTAGCATTTCCGTTTCATTCAGATTAACATTCACA
AATCATAGGCAGCGACAAGCACCAAAGGAACAAAAAAATCTTCAGAACAATAGATGAAGC
ACTTATTCTGCTCGTCGCTGTTGTTGATGAGCATCTCAATGACCTCGAGGACCATGAAAG
AGGTATCAAACAAAGAGGTAAAATATGCCACTCAAAAACGAATTTGCATCATCACTGTTC
TCGACTCGCTTACTCGGGTTTCAACAATCTGCAACCACCGGCATGCTGTCCCGGTTCCGA
GATGACAAACTTGAATGAAAAGGTTGTGATGAACTAAACGATGGTTGTTGGGTGCACGTG
ATTAATTAGCTCAAAATTTTATGATCCCTGTAAACTTTTCCCCATGCTCAAAGGGATGAG
TTGAAAGTGAGAAAGGGAAGAACGGAAAGCCTCCATACAGAGTTTCTCAATAAAGAGTGT
TGGTTCTTCAGTAAACAATCTGTATAGATGTTGAAGTTTGTACCTGGGTGGAACTTAAAG
AACAAAAATGTTGTAACAATCTTAGCTCTGGTGGTCCTTGGATGGAATCCATCAACGAGA
GGGATTTCGCACTGTTGGGGCAAAAGAATCAAGCTGCTGAACATGTGAAACATTCATCCT
TGCAGCAGGAACTTCTGCACCATTCATTCGTCAGATTAGAACAACCAGTGCTTCCGTTTC
ATTAAGATTAAAATTCACAAATCATAGGCAGCGACAAGTGCCAAGATTGCATTCCAACAG
GCATTCACAAGGCTTGATGAATTACTATCAGAGCAAGAAAAAAAACAGTTTCATTCAGAT
TGACATGGGCAAATCACAGGCAGAAAACATGAACCAGATTGCAAGCATTCCATTCCATCG
AGATACAACCTCGATACATGAACCAACGAGAACTAATCTACCAGCATACTAAAAACATCA
TCGCCGGACCACGCTATTTTTCAGATCTCGAAGGCTCTAGAACTCCTGGGACTGGGACGC
GGACCCGCCGGTGCCGGCGGCGGCCTTGCCGGCCTTCTTGGGGAGGAGGACGGAATTGAT
GTTGGGCAGGACGCCGCCGGCGGCGATGGTGACGCCGCCGAGCAGCCGGCTGAGCTCCTC
GTCGTTGCGGACGGCGAGCTGGATGTGGCGCGGCGTGATCCGGGTCTTCTTGTTGTCGCG
CGCCGCGTTGCCAGCCAGCTCCAGGGCCTCGGCGGCGAG