| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_81476
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78697 |
1 |
182 bp |
AK366110 |
Not available |
Available |
None |
CDS Structure of MLOC_78697
Contig Sequence (4707 bp)
>contig_81476 4707 assembly3_WGSMorex_rbca.fasta
TTTCCACATCTTCTATGTGCCCAAAATATATCTCTCCACATCTTGTATGTACCTGGTAAC
TTTATCACATATAATGACACAATGCGAAGGTTTTCCAAATTTCTTTTTTTTTAATTTTTC
ATGCCCATTTTAAAATACGGTCAAAACAGTGGGTATCACCGTTCGTAGCTAGGGCTTGAT
TTTTGCAAATATTTTGGAGTATCTATGAAGAAATAGATACTTTTGTACCTAGAAATTATT
TTGAAAATAAATAAATAGCAAACTATGAGACATGTGCAGTTCAAATTTGACCTGCTTCCA
ACTGAATCGACATTTTTTTTTCTTTTTCATGAGAGGTGGATAAAAGCTTTTGACACCCAA
CTATTTGGTCAATCTTTACTTAATAATAAAGAGGCTATCACTTCTGTCGGAATTTCCGCC
ACGCCAGTTTTGCATAAAAACCCTTCTGTTTTTGGGAAATCAACCCGCAGTCCTTTTTAA
AGAAATAACGTTTCACTTAAACATACCTTTTTGCTCTCAGCGTCTTATCCACACACGCTC
GCTCTCAGCGCCTTATCCACATATGTCTCGCTCCGGTGGCCAGAGGTGGGTTGCGTGAAG
AGCAGAGAAGTTGGCAGCGGAGGAGATCCTCCCGGCGGCGGTAGGGCGTGGGGCCGCAAT
TAGGCAGGGAGGCGTTGGGGAGGTCGTTCCGCCGGCCACACACGCTCGCTCCGGTGGCCA
GAAGCTCTGCTGGATCGCTTCTTTCAGACAATGGCCAAGCAAAGAAGAAGGAGAAGGCTC
GGGCTACTGCACATGTATGTACACACATCCATTGCCAGTGGCGCGATTTACAGAGAAGAA
CTATCGGTTGTGCGTGTTGTTCATCGCTTTTGTTTGTCCCAACTGTTGATTCTTTCACGG
GACAAAGAAGAGGAGGAGGAAGAGGTCAAGACGATCAGCGGCATCATCAACTCGGCCCCG
TCGATGGACGACGATGAGGACGACATGTTCTTGGAGATCGAGAACCTCCTGGGCGGGGAG
ATCGACATCCCGATACCGGGTGACAGGTTTGAGTGGTCCAGGTACAACGCGCACATGGCC
AACAACGCCGCCGAGATGGAGCGGCTGCGCGGCATGGGCGCCTCCACTCTCCATTCATGT
TCATTTTGCACGACGGCAGGAGGGGGCCTGATAGGAGTGAGGCTCGCGACCCGCCTCATG
ACTGCGCCGGAGCCGGCGAGCGTGCTGCAAGAGCCTTCATCACGCTGGCAGCTGCTCCCG
CCTCCACTCTCCCAGTCTCGTGCCCGTCCGCATGAGATACAGCAGAAGCATCCAGGTGCC
GCGCTCTAGCGTTGCCTAGACCTCGCGCGTGACCGGAGTGACCTCGAGCGTGCCGGCTGG
CGACAAGCATCGCAAGCGTGAGGATGACGAAGCAGCATCCCATACGCATCGGCTGCGTGA
ACTGTACGTTCGTCGGAGTAACAAGAACATCGGTGGAGCCGTCCAATGTCGCCTGCAGTG
GTTACACCAGAGGATTTTATCTAGCCTGTCGTGTCGAATTTCAGACTGATAGTGTACATG
AGGCCAAATCTTGACATGGTTCACTCTTGAACTTTGCGATAATCAATTTCTTCCTGTATG
TATTTGAGGCCAAATCTTGACATGGTTCATTTCTGCCACTATGAAGTTCTTGATTGTACA
TTGGATGCTCTAAATGTCGCCTAATTTGTATATACCCTGCAAAGTTTGTACTACTTGTTT
ACACATCGTTCTTAACTGTCAACTTAATTATTGGGCACACAATGTATAACAACCAAATAG
TTGAGCTCTCATATTGTCATCCTGCTTCAGTCACTATGAATTGAGGGGAAACAATTTCGG
AAGAAGATAAGATTATTGTTTGCCTATCTGTCTAACTTGATTTTTTTGGAAAAGCCATAA
GATAGCATACGGATGTTCTTATTAACATAAATTTCAATCACTAGCTGTACCATCCTACTT
AATATTTCCTTCATCTGACACCCATGTGTGAGGGGCCAAATGCTTAATTAGGTCTTATTG
TTGTCATCTTTAATCATCATGGGGTCAGTAATCTTGCATGTATTATTTTGAAAAAATGCT
TTATGAACAAACTCATGAAAGCTTTGTCTCTCATTGTAATTTTCATCTGTTGGATTACAC
CCCATCTTTTTAGATGGATAAGATCATGTTATTATATGCGATAGAAAAACTCCAGAATAA
TATAAATCTTGACTCCGTCGGTGCGGGGCTGGTTGCAGGCTGATCGAGAACGACATGTTA
AAGCAGGACTGGCGGGCGCAGGGGCGGGGCCACATCCTGCGCTACTTCGCGCTCAAGTGG
GCGCTCTGCTTCCTCGACGACGCCCTCACCGCCGCCGCCGCCTTCGTCGCCAACCTCGGC
GTCGAGAACGTCGTCGACGCCAAGTTCGTCGTCACATCCAACCGCATGTTCGCGCGCAGG
TAACCGACAGCGTCCAATGTATCTCTGCTGGACTGAACTGACTGTGATTTAGTAGGTGTG
AACATCGACTTGAGTTGCATCTGCTGGAGGCGTGAATTAATTTTACCTGATGTGTGCAGT
ACATGTTACTTTACCTGATGTGTGCAGTACATGTTACTCATTACAATGTAGCCTAGATAT
CCATCTGCTCACATGAGATGCAAGTTTCACCAAATTCTTGACTAATCCAACAATAAACAA
GTATTTCTGTTGTTGTGTTGCTGTCCTTTCATGCTAGATAGTGATGTCAAATTACTGTTG
CGGGTTGTTTCATGCTAGATAGTGATGTCAAATTACTGCCGCTGTTCTTTCATGCTAGAT
AGTGATGTCAAATTACTGTTGTTGTCCTTTTCATGTTAGATAGTGATGGCAAATTACTGA
TGTGTTGTTGTTATTGATGTTATTGTTATTGTTGCTGTTGCTTTCCTATATCTAGACATC
ATCGGAATTTATAACATCAAAGTAACTCTCTTGTAGCTATGCAGCCTATTATTGCATTTT
CAAACATTCAGTACAATGCAGCTGTACTCCAGAACCGATTGGTCTGTAGCATTTCCATTA
GCCCATGGATATCATGTCCTTTGCTTTTTTTGCTTGTGTTCTGTTTGGTTATTATAACCA
GTTATTGTATGGAGTATACATTATAGCAAGCATACCAGTTTTTTCCAACCGTAATTTGTT
TTTGAAGCACCAACCGTAATTTTTCCATACAGTAGCTTCCACCACTACACAACGCAGACA
ACTTAAGCTTTCTTTTCTTTGTTGTTTTTGCCTAAAATAGCTTTCTGAGATAGTCAACGC
TGCTATTTTCTATACTAACTTTTGCTAGATTATAGCCGGTAATTAGGTGTCCAGTTTGTG
CTGCACGCGTAGGATTCTGTGTTATTGTAATCTAGTAGATGGATTTANNNNNNNTGTTTT
GACTTTTGTTAAGTGATGTAGTACTAATGCTATAAAACCTTTATTAAAAAAACTAATGCT
ATAGAACAACCCAAGCTACTTCAAGACCATGTAGTTTTCTCGTAGACAGAAGTGGCATGC
CTGCTTATTTTAATTGCAACTTGCCATGTTGTAGTATCTATCTCATGAGATTGCAGCTTA
GTTACCAACCGTTGACAACAAAAGTTAGATGTTATTAATATATAATGTAGATACAATATT
TGGATCCATCATTGTCTAATGTTTGATGTTGTGTACACCTTATTCTTATTTTTTGCACAG
GTGAAGTACAAATCCAAGTGTGAAGCTATGAAGCGTATCAGTAGCATATGTATTTAATAG
TAGGTAGTAGTAGGCATATCTGGGTTGTGGTGTAGTGTAAAGATTGTAATAGACAAATTT
AATGTTTGTTTGGAGGAATTTCATTTGGTCCCTAGCCTGGTTGAAAATATTGGCCGTGAA
TGTGATTTGAATACCTATGAAATGGCAACGTGACAAGGGGACCAAGTTATGATATTTCTT
TTACAAAATGTGGAATTTCTGATGTGTGGGACTCATTTTCACATCAGCATGACATGTGGG
ACCAGTACAAAAATAAAATGGCCAAAAAAGAAAATCTATAGAAAGTAAAAGGCCACAACC
CAAAATTAAAAAGGCTAAAATGTTGGGCCTGGCCCAAAAATGAAAATAGGCCAAAACTAA
AATTGGACCAAATGTCTTTGGGCACTAAAAGGCCAGGGCCCGAATTATAATGATAAAAAA
AAATTCAAAAAAAAACTAGAAGTGGCTGTAAATAGGCTAAGGCCCAAAAAGAAGCCTAAT
AAGAAAAAGCCCAAAAAAATAAAACCAGCCCATGTGATCAATTGAAACGGGTTGGGCTTA
TTTCAACCATGACGTTTTGATTTCATCGTAATTTTGCCACGTAGGACTGCCACGTAGGAC
TGAGTTTGATTGCTAACAACGCTTTAGGATCATCGTAAAGGTTCTGACAATCCAGGAATC
GTCGTAAAAGTTACCACGATTTCGATCAAAACGTCGTTGTTGTTCATTTGTGACGCTCCG
TTCTCGACGCTTGGTTTTTCGTCGTGAGATCATCGTAAATTAAAAACCGTGGCGATGTAG
CGACGAAAAAATNNCGTCGTGTATTAGCATATTTCTTGTACTGTTGTTCGGAGTCCCGGA
TGAGNNNNNNNACGTCACGAGGAGTTCCGGAATGATCCGGAGGTAAAGATTCATATATNG
GAAGTGGAGTTTTGATCGCCGGAAGAG
