Contig Data
morexGenes
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Map Locations of contig_8133 (2717 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_8133

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78661 1 1693 bp MLOC_78661.1 Available Available LOC_Os01g57630.3, FRAME:-3, EVALUE:6e-150, 13101.m06117 protein pentatricopeptide containing protein, putative, expressed





CDS Structure of MLOC_78661






Contig Sequence (2717 bp)

>contig_8133 2717 assembly3_WGSMorex_rbca.fasta
TTAGGAGTAACATAGTGGATACCAAGTCAATATGAGTCTATATACTAATAAATGAAAGGT
TTAATGTTACAACCCCTATGTTACTACCCATTGTGAATGTAGTAACTTAGACTAGTAACA
TATGTATGTTACTACTCTATGTTACTTCCCATTGTGAATAGTTTGAGCTAGGTGCTCACA
CTTACCTGATCAAGAGCCACACAGTACGAGTGCAAGGTGAGAATGAGATGAGGGGGATAA
ATGGAATGAAATGCATCATAGGTCCTAAAAATTTTAATTTTCATATCAGGTCCCAAAAGT
TTGTAAGTTGTTCCTGCAGGTGTTGAGCTCCAACAAACACAATAGTGATTGGTAGCAGAA
ATCATATTCTATATATTGGTTACAGTAATCGGTGTCATGACATTATGATTGCAGTGCCAA
TTATTTACTTCGACAATGTCAGTAAGAAGTTATGAACAACTTACTGTCATTACTTCATGT
TACTAACCCTGACACATATAGCAAGTTCATACAGAAAGAGAGAACGAACCTAAGATTAAA
ACACAATGACACAACTCTATATATTCAAATGCACTAAGATTACACCTTTGTCCAATGGCA
TCTGTCAGTCTTTCCTTTAGACTGGTGAACCAGCAATGATGAATGGATTATAGTTCTATG
GACACAAAAATTGCAAAACAAAATTAATTTCAATGTGAAGAAATGGATATCACAACTAAC
ACCCAACACGAAGCTGAATATGAGTATATTTACCAGCTCCATGTTGCTAAACAAGTGTCA
AACGGTTCAGCATTGCATGACAAGATGACTGGAGTATATAGGTCAAGACCATGAAGTATT
ACTTTATCACTATCGTAGTTTGGATCATTTCGGTCAAGTACTGTAGATGTATCAGCGTCG
ATAAGTCTTTCCCAGGTGCCTTTGTCACCAGCAGCATTTGTAGTACTCGCTCCGTCCCAA
AATAAGTGACTCAACTTAAGTTAGTACAAAGTTGAGTCACTTATTTTTGGAACGGAGGGA
GTAGTACAGAAGAGCAATAAATCAGACATTTTAGCAATTTTCTACATTACAAAAGTAGAA
ATGAGAACTAAATAGACCAATAGACACCGGAAAACACAGGTATTTTCCAAGTGCATTTAT
TTGATAGAACCTGCAGTGGTATTCAAGAGTTCCCCAAACACAAAAAGACCCAACCACCGT
GATGAAATTGGCAACTATTTTTCATAACCACAATGCGCATGAGTTCTGCAACTGACAAAC
CTGCTGCACTCTCGTTGCCTCACTGGAGGAGGTCCGTAGGGAGTCAGCGGGGGCAGCACC
ATGGCCGGGCAGAGCCCAGCCGGGGGCTGCACTCTTCTAAAAGTAGTACAACACAGGTCA
AGATTAACCAATACCATATTAAACTAGTTTAACGACTACTTAAACTTGCATTTTTTGTTC
CATCATACCAACAGAAGAAACAGAGTAAAACAGGTCTGGTGGAATTCGGCTTGCATCAGT
CAAAGTCTGACCTATGAATTTTATTTTTCAGTCTCATCTTCCACTTCCACACTCCTTTTC
ATCTGATATTGATTCTTCCTCATCATTTCAGCACTAGGTGGCATCCTCGAGCTGTACTTC
CACTTGAGCTCATCAAGCTTGGTAGCCTCCTTCAGCCTCGATGCATCTACCAATGCATTC
ACAACATCCTGCAGCACACCATACTCGACTCCACAACACCTTTTAGTACCAAAGATTTGA
TAACAGTACCTCAGTGCACAATCCAGCTCTCCAGCCTGCAGAAGATGTGGCAAGAGAGTC
TCATATGTCCCCTTATCCGGGACACACTCATTCTTCATCAGATTATCATACATCTTCTTG
GCCTCCTGGAGCCTCCCTGCCTTGCAATATCCTCGAATCAACTCATTGTAGGATACGATA
TTGGGTTTCGGCCCGTCCTTCTCCAACCTCTCAAGCACAGCAGCTGCATCATCAACCCTC
CCTTGCGCAACCAAACCCTGCAGCCTTGCATTGTAGCATTTCGCGTCTGGCTCCAAATTC
CTCGCCTTGATCATCTCCCATACTGTCTCGGCTTCGTCATTGCGGCCACAGCTGAGAAAC
CCGTTCAAGAGCGTGTTGAAAGTAACAATGTCAGGCGAAACACCGCGCTTCTCCATGACG
AGGACGGCATCAAGAGCGGCTGAGAGGTCCGACTTGTGGCACAAGGTGCGGATGAGCACG
TTGTAGGAGTATACGGTGGGAACAATGGAGGGGTGGGTGGCTGGGATCTCCTGGAATGCG
GCAGTGAGCGCGTCAAGGTCTCCGGCTTGGGAGTACGCGGCAAGGACGGCGTTGAACGTC
CTCGTGGACTTGTGCTGCGCGGGAAGCTGGTGGAAGGTTGCGGCAGCGTGGGATGGCATG
GAGGCACCGCCGTAGAGGCGGATGAGGCGCGTGGCGAATCCCTCGGTTGAGGTCTCGAGG
AAGGGCTTCTGCGCGTCGATGATGGCCTCGATGCCGTCCCGGCGGCCCAAGGAAGCGAGG
CGGCTCACCGCTACCATGTAGGCGCGGGGCCGGTCGCGGAAGCCCGGCGACGCGGACGAA
GCTTGGACGAACTTGGAGACCAGCTTGTCAGGGTCCCGCTCCCTGATGAGGGCCTTGAGG
TTGACGCCGAGGGGCTGCGGGCCGAGGGGCTTCGGGAGCTTCTGATCCGCGATGGAAGCG
GCATCGGCGGCGGGCGG