| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_81274
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78646 |
1 |
244 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_78646
Contig Sequence (6012 bp)
>contig_81274 6012 assembly3_WGSMorex_rbca.fasta
TAGAAAATTATCATGAACGAGGAAATATAANNNNNNNNNNNNNNNNNNNGCCTCTAGGGC
ATATTTCCAACGTTAACTACTCCCTCCTCGTCATGGCCTCCGCCGGGATGGTGAAGATGG
CCATCGGAGATGATTTCCCCCTCCCACAGGGTTACTGGAATGGCTCATGATGGGTTTTTC
TTTGATACACAGAGTTGCAGCGGTGGAGCGTAAGTTCTAGGTTAACTTTCGGGGGTTTCT
GGATTTATAGGAATTTAATCATGTTAGCCAGAGCCATGTGGGCCCCACAAGCTAACATGG
CGCACCTAGGAGGGTGGGCGCGCCCTGTTGGCTTGTGGCTCATAGGTGGCTCCCCTCTTG
TGGTTCTTTACTCTGGTATTTCTTATTTCCCCCCAAAAAAACATAAAAAAAATTCAGGCA
ATTCCGAGAATTTCTATTTTCTGCACAAAAACAACACCACGGTAATTCTACTAAAAACAA
CGTCAGTATGGGTTAGTTCTAAATAAATCATATAAAGTGCATCAAAACCATATACAAGTA
TTGTAAACATAGACAAATATGGCATGGATATTTCATAAATTATCGATACATTAGAGACGT
ATCACTAACTCTTCCAAGTATTTCCTTAATATCTCTCTCCACATAAATCCCTTTCTCTAG
TAGGTGAACTTAATTGTTTGAAAGGGCTATTATTGGTGATCTTAACGTCCATGGTATCAT
CATTAGAATCCTCCCCATAAGAGTCCTCCTATAAGGCACGAATTTCATCATTAATAGGTT
CTTTAGCATTATTTTCATGCCAATCCTCACTAAATCCTACAATGATTCCTGTAAAATTCC
ACTCAAATTTATCACACGCATTGAGGTATAAGGCTGTAATGAACTCTTCGCGAGGAACTC
TCCTTCTCATATTCTCACCAAAACCTTCATAGTCCTTAGATTCTAATCTATGCATCATGT
ATTTATCATGTAATATTTCTTCTATTGGAGGATATTCAAATTTTATTCTATAAAAGAAAA
AGGTTTCCCTAGCCTGTTTTATAATGTTGCTGAATTCATGAACAAGGAAAATAGTGGCTA
AATGCTTAGTGGAGGGATCACGAATGTTGGAAAATTCAAGAAACATCCTTTGTATACGAG
GATGCATATGCACAAATTATCTCTCCAACTCTACTACAAGCAAAGATATGCCATCCGCAA
AACTCATAGTTCTAGTAAGTATCGATCCATCTATCATAGGGAGTGAGCCAGCACAAGTAA
AGAAATCTTGGATCACACTTTTTTCAATAATATTACCACTACCTATACGAAACTTCTTTG
TATGCATAGTATTTGGGTTCTCCTTTAGAAGGATCATCATCAACAATATTCTCTAGTGTA
TATTTTAAATTTTCATCAAAGCTCCTCTTAGTGTTTTCATTAATTGGTGAAACTTGATGA
TCAAAAGGCTTCGCACTAGCGGCAGGAGCATCAATAACCCTTTCAAATCCAGATGTGATA
GCAACTTCAAACAAAATAAGCAAACAAGCAAAATGAAATTTTTTGTGCTTTTGATATTTT
TAAGCAAGCAAATAAAAAGTGGAACAAGTGAATGATAATTTGTTTGAAGAAACCTGATGA
GAATTTGATGATGACTCCCCGACAATAGCGCTAGAAATTCTTTCTGCTATTTGTGAGTTG
CGTTGGGTTTTTCCCCGAAGAGGAAGATGAAGCAATATAGTAGCGATAAATATTTATCTC
AGTGAGAATCAAGGTTATCGAATGAGTAGGAGAATCAAGCAAACCCTCGTCGTCAACACC
TAAAACCAAACACTTGCACCCAACGCNNNNNNNNNNNNNNNNNNNNNNNNNNAACTCGTT
ACTTGCAAGGATTAATCCTGATAGATATAGATTTATAAATAGGAGAAGTAAACAAATATT
AATAAGAAGTACAACAAGGTAATTTTGTTTTTTAGCAATATGTTTAAGTGGACCCGGGGG
CCATAGTTTTCATCAGAGGCTTCTTTCTAGAAAATAGCATATATGCATACACAAATTATT
GTTGGGCAGTTGACAGAATAGCGCATAGTTATGACATGTTATTCATGTCAATGATTATGT
ATATATAGGCATCACACCATAAATAAGTAGACCAAAAAGATCTTGCATCTACTACTATTA
CTCCAATTCAAGAGTGCTTCTATGCTTGCCTCTCTAGGTATTAAGTTAATGAAAAACAGA
GCAATGCTTGGAGCAAAATGACATAATGTAGACAAAGTAAGACATGCAATATGTTCAGAC
CCGATCGTTTCATCCTTAGTAGCAACAATACAATACATGTCTTGTCCCCTTCTATCATTG
GGATATAGAGCATCACAAGATTGAACACTCTACAATGCACCACTACCACTGAAGATCAAT
CAGTCTAGTTGGCCAAACCAAACAAATAGATCAAAGAGAAATACGAAGCTATAATAATCA
TGCATGATAGAATTCAAAAAAGACTCAAATACTTTCAATGCATAATCTGATCATAAATCC
ACAATTCATCGGATCCCAACAAACATACCGGAAAAGAGGATTGCATCGGATAGATCATCG
CGAGAATCGCGACACACATTGTATTGAAGATCACATAGAGAGAAGAAGTCATCTACGTAC
TAGCTATGAACCTGTAGGTCTGTGGTGGACTACTCACNNNNCATCATGGAGGCAACAATG
TTGATGTAGATGGCCTCCTTGATAAATTCCCCCTCCGACAGGGCACCGAAAAAGGTCTTC
AGATGGGATCGTGGCGGAAAACAAACTTGCGGGGACGAAAAAAATGTTTCTGGTTGCTCT
TCGGGGTTTTAGAGTATTTTTGGATTTATAGAAGTGAAATTAGGCCAGGAGGGCTCTCAA
GGGGGGCACAAAGCACGGTGGGTGCGCCCTCTAGGCTAGTCGCCTCCTCGTGCGGTGTTT
GGCCTCATTCCGAAGCTTCGTGGGTCCAAAATCGTCCAAAAAAATCAACAAATTTTTTCA
TCGTGTTTGGTCTCTATTTGGTATTGATTTTCTGCAGAAGTCAAAAACAAGCAAAAAAAC
AGAAACTGACACTGGGCATTGGTTAATATGTTAGTCCGAGAAAATGATATAAAATAGCAT
TTTATTGCATATAAAGTATCCAAGATTGATAATTTAGTAGCATGGAATAATAAAAAATTA
NAGATACATTGGAGACGTATCAATATACTAAAAAAAAGGTAAAAGATAAAAAATTGTAGA
TATATTGATTGATTGTGTGTTGTTCAACTGCCCATCACCTCTCATCTATATATAAGGCGT
CTGATTTTTGTGTGAAAGAAACTCCAAATCCCATCCACGTTTTTCTAGAAAGTAACCAAA
CTCTAATTACTCGCGTGGGCCTAAGACATCTATTTGGTTTGTGGGACCCTGAGGCCACAT
ACAAATTTCGATCGAGGTGCCCAAAATGCAAAGTTGCCCGTCTTAAGAGTCGACGAAAGT
TCCCCTTGAACGTTTTTTTTTCATCAGGGATCATCTTCAGGTCAAATCGCTCACGTCTAA
AAAGTGATGGCTAACACCATGTATTATAGATAGGTATACGTGATGTTTGTTGCCGGGCGT
CACCTTTTACTTGTGATCGGATGACAATGCATTTGTTGTAACTTTTGCACACGACCTTAG
ATTAAGATGATCCAAATATAAACATCGTTCGTGTTGATAAGACTAAGTTTTTCTTATAGA
ACACTTTTCCAGATGAGGTGATCACAGATGTGTTATCGGCCGAGTAGTACCACGAGGAGC
AACTTTCAACACCCCGAGCACTATATTGCCCTTGAGATGAATTCCAATGAAGATGGCCTA
AACATCAAAGTTCTTCGTTTTGCCGATACAAAGGTTTCATATTAAACATTTATTCATTTA
GGATAAACCTGGACATGGGCAGCCCGGTCCAAAACATCCGGCCCGACCCTGTTCCGGTCG
GGTTCGAGCTTGAAAACTAGGCTCGGCCTTGAAAATATAACCATTTTACATGGAGGCCCG
ACCCAGCCCGTCCGAAATTCATCTTTTTAGTCCATTTAGATCAGGTTCAGGCTTGAATAT
TTCTTTTGGCCGGGCGAGACCCGGCTTGGGATTTGGATTTCTAGTTCGTGCTTACTAAAG
CCCGGCATGGGATATGCCCAAGTTTAATTTAAGGTAATCTTAGTTAAGCTTTCGTCGTGC
TGAAATCTGGTGTCAACATGATTCAAACCCTTTTTCTGGGTACAAACAAACTTTTTTTGC
ATTGCACCTCGTATGAGAAATTCTGAAAAATAAAATTTTCTTATGGCATCACAATGATTG
GCTCATATTCCTCGTGAGGATGCTAGTTGCGGATTACCCCTTTTCCAGCTGTCATGAATG
TGCATCACTGTTCTTTGTGATATGACAAAATCCTTTGTATTTCCGTTTGGAAAAGTCCCC
TTTTAGCGAAAGTGCCAGCCGTATATGTCTTCTCTTGTGTCAAAATCAATGGAGAAACGT
CTCTAAGAGCATCCCTAGCATATAGCAGATCGCCAAAAGTTTTATTTAGAAAAAATACTT
TTCAAAGGGATCAAGGTCTATCTTTTCTTAACACAATGCATGCACATACGTTCATATACA
AGCAGATACACCTTATCCCTATGAGCACCTCCAAAAGACCGAGCCGACATATTATCTTGA
GATTTACAAAGTAATTATAGGCGTCTCGTCGCTGATGGAAACACCCCCTTTCACTGAATG
CACATCGCTGAAAATTCCGAAAAAAATACAGGAATAAATGCGAGCACCAGAACTTGAAAC
ATAGTGGACTGTAAATACCACAGTCTCTCTAATCATCCAACCACATATTGGTTTACGATT
AAGACCTATCTAGAAGATCTCTCAAACCAATAATTTATTTTTTGAATACGGTACCCATAC
AAATACTTACATACATATGCATACACTAAACCCTATGGACACACACTCTTCTCTATGAGC
ACCTTCAAGATATTAAACCGGCACGGCATATTGAGATTGACGAAGTTGCCACATATGTAT
TCGTAATCGATGAAAGCATATATTCACACTGAAACACACATTGTCAGAAAGGTTAAATAA
ATTTAGAAAAATGCGACCAACGGTGTAGGACTTGAACCCTAGTGGGTTGGTTCCAACATG
GGGAATGAACCTTAACCCACCGCTTCGCAGTCAACCCCCGTGGCTAGAACCGTTCCACCC
CGCATCCCTCTCGCACACCTTTCCTCGCCCACCGACGTCGAAATCTTCCTTTTCGCCACC
GGCGAGGCCGCACTCGCGTAACTCTGCCCGTTAGCCACCTAGGTCCATTTTCATCGAGAA
AATCAACCCGTCCAGCCTTGGAGATCATGGCATACGAAGGTGAAGCACAACTCCTAGGCC
GCCGATGGCACCGGAATCGAGGAACGAGACCGCTGCCACCACCCCCTCTCACCGTCCCGA
CACTCCAGCCGTGTGTTAGGGGTCAAAGCAATTTATCCTTGTACTTTGATGATCAAGTGT
GTGTGCTTGTTTTGATTCATGAGAACCTAGTTGTTTTGTCTCTGAAAAAAAAAGCTTCTC
CATCTGTGCCAGCGAAGTTTTTTTTTGTGTGTGTGTGTGTGCAGAAAACAAAGAGAGTAC
GTGGACAAAGCGGACAAGGACGCCAGTTCAATTCCGGAAGAGAAAAGGGAAGAAAAAAAA
AGGAAAAACAGGACACGGGCAGCGCGGTTTGCCCGCCCACGGTAATAAAAAAGGAGAGCC
GGAACCCCTGTGCGCGCCGCGGACGAATCTCAGCCCTGAAATCCCCATCCCCTCCCCCGC
ACCCGTCCGTCTCCCTCCCCTCTCTCCCTAGGGTTCGGGCCTCTCCTCCCCTCTCCTCTC
GCCATGATGCAGCCACCGCCGCCGTCGCAGCCGCAGCCGGGCATGGGCGCCCCCATGCCG
CCGCAGGGCGCGGGAGGGCAGGCGCCCGCCCCCCCCCGGCGCGGGGCGCGGCGGGCGCGC
GCGGGGAGGGCG
