Contig Data
morexGenes
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Map Locations of contig_81160 (3226 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_81160

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78615 1 820 bp MLOC_78615.1 Available Available None
MLOC_78616 1 412 bp MLOC_78616.1 Available Available LOC_Os05g49860.1, FRAME:-1, EVALUE:2e-23, 13105.m05340 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed





CDS Structure of MLOC_78615






CDS Structure of MLOC_78616






Contig Sequence (3226 bp)

>contig_81160 3226 assembly3_WGSMorex_rbca.fasta
TTAAATAACTACGAACTAAACCGTTTCTATCTCGTCGACACGCAAACCGATGCAAACATC
ACGCTAAACAACTTTAATTATGCATGAGATCTGGGAAATATTATTCTACGCGAAATTCTA
GCCAAGTTAAATATATAACTTGTCGCAATCCGACGCACTGTTTAAAATTAACGCGGGTTT
TAAAATAATGCATTTTCTCAAACCCTGGTAATTAGATAAATTCGTTACACAGAAAAAAAA
ATGGCATCGAGCGGAATCTAGTACTATTGGGGCCCAACAGAGCTACCGAGCGTAGTATAA
TTATACTACTCCCACGCAACGGATAGTGGGTTGGGTGCTGGCTCACCTCGTGGGCTCGAG
GCCCGAAGTGCTGGAGCTAGGCCAGTGGAGCGGCAGGCCACGTTGGTGCCGCGGGAGGCG
AGGCTGGAGCGGGCCAGTGCTGGATCTGGCCACGCGGCTGGGCCGACTCGCGGGCTTGCC
AGGCCTGCTCGTGGTCCAGCTAGGCCGGGGCGAGGCAGCCCACGCGAGCGCCGCGCGAGG
CGAGCGGCTCGTCTGCGTGATCGACACCAGTAGGCCATGGTGCAGCGGCTGGCGGCGGGG
TCACCGGCGGGAGGAGAACTTCGGCGAGGCGTGGGGCTCATGGATCCGGCCCGGGGCCTC
CAGATCTGGACGTGCAGAGTCCGTCCCCAGCGACGGGAGGCCTCACACCGCCGGCGTCGG
AGCTCCACCTCACAGCGGCCATGGCCCTCCATACGACGAAGAGAACGAGGGGGAGGTTAG
AGAAGACACAGAATGGAGGAAAAAATGGAGAGGTATGGCGGCGGCGGGGCTGGGGCTGGC
CTGGTCGGGGTCCGGCACGGCGAGGTCCTCCGACGATCGGCCGACAAGGAGCGAGAGCAC
GGGGTGCTGGAGATGCGGCTCAGGAGGAAGCCAGGGAGCTGCAGGAGGCACTCTCAGCCG
TCGGATCTCTGATCGAGCGGTCGAGATCGATTGGAGGGGCTATGTCAGATCTGGTTGGCT
GTGGATGGATGATTCGGTGGTGGAGGCTGGTTGGTTGTGCGCGGATTTCGAGGGGAAGAG
AGAGAGTGCTAGATTAGGTAGGGGAGGGTTTGTTTAAATATGAAGGGGGCTAGTATTAGG
GGGGTTTGCCTGGTTTTCGGGTCGTTGGATCGCGATCCGACGGCTCCGATCGGAGGGGTT
GGCTCGGTGGGTTGCGGTGGCTGTGTAGAATGGGCTAGGTAGGAAGAGAGGGAATGCTTG
CAGCCCGTGACACGAGTTTTAAAACCGAAAAAAACATCCGACGAATAATCGACGATGGTG
CCGCTACTATCGACTATTCGGGTATCAAACAGACTTCGATTGCAACGAAATTTGGCAGGC
GNNNNNNNTACATAAAAATAAGACCGCACGTCAAGTTTCAACTCAATTCGAGAAAGTTTT
ATACTCACTTTTAAAAATAATATTTTATCGATGTCGCGAGCACGTGCGTGTGTGGTTGGT
CTCGAAACAGTTAACGGCGAGCACGAAGAGAACTGACAACTAATAACGGATGCAGTTTTG
AAAACCGACGACAACAAAGTGCCGATGCAATACGGATGATGCGCATGAAGCGATGATGAG
TGCGACAAACAAATAGTCACATGACAGCAATGGAATAATAGGAGAATCTTCTCGAGTATC
GGTCTCGGGCTGTCACAAGTTAGTACAAAACTGACTCATTTTTGAATCACTTATTTTGAG
ACGGATGAAGTAACAATTTCTTGTTATTTCACTAACCATCACCATCTTTATGCAAAAGAT
ATGCAACTAACTCATTTTATTCAAAAGGTACGTGACTACCCCAATAAATATCAAAAAATA
AAAAACATATATGTTGCATACCTAAATATCACCAATCTTTATTCAAAATATATGTCCCTG
AAAAATAAATGAAAACCTACTTGCAAAAGTAACACCAAAAGAGAAAAATAAAAAATAAAA
ACTCTCTGCTTGAAAAGAAAAATCGGCACTAGAATATCTACTACAATATGCAAAATATAC
TCTCACTTGAAAAGGTGCAGCAAATGAATTTACAAAAATGAAAGGGATAAGAGAAAATTG
AGATAACTTACTCCAGTAGCAGCAGCAGCAGCAGCATTCATCCTCTCCCTGGTGGTGTCC
GAGCACAGCGATCTGACCGTCCCTCAAGCTTAAATTTTGGAGCGAAACTGACCGTCCCAA
CAGAATTTATTTTTTTAAAACGGGCTGGTTATGCGGCTAACACAGGCCAAATCTAGACAA
AACCACTTCCAGCGCGATTCTTGAAGCAAGGAACGATCCGATGGTCGTTGACACATCGAC
TGGAGACGTCACTAAATCTCAATCGACTGCGATTTAGCAGGCTCCATATATTAAGATACC
GTAATGCTAGAATCAGAGAGGGACATTGTCTTCTATGGAACCGAACGTTCAGTGCAGGCA
TTTGTGGTAAAAACTCTGGCTTGCAAATATAATTTTTACAACCAACGGACAACTAATATT
GAATCTTCTTCAGGGTTTAAAATAAACTCATACTTGCCGGTTTTGCCATTTTGTTTTCAT
AAACCCGTAAATGAAAAACACCATCATCCTGTCTGAATCGCACACCGTCTCCCAAAGCAC
AGGAGAGCAGCAGTCAGCAGGGCGGGAGTCTATGTCTGAAACCAAGTCTTTGTCTGAACA
AATGGACACTTTCGTCAGTTTCAAGCAGTTTTGAAACCAAGTCTATGTCTGAAAGGGTGA
TCACCCTCGTAAAGCGATGGCTGAAAACAGAAATTAAGAAATGAAACAGAGAAACAACTT
TGCAAGTTCAGAGTCGTTTTCTGCATAGTTTTACAGGGATAAGAACAGAGCAAGAACTCT
GTCAAGTGAAGCAACAGGGATAAAAGAATTGAACTTGGTAGAGAGCCAAGAGACAGATCA
AAGAAGCACCATTACTATTTCACGAGACAATGAAACAGTGTGTTTCCACACAACCAGCAC
AAATTACAAGACAACATGATCCCAGCAGCTGACTATTACAGAGAAAACCATCGATCCACC
AAGAAGACAGCGAACAGACTATCTAAGCGGAGGTGAACTTGGTCACGGCCTTGGTGCCCT
CAGACACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCT
CCCTGGACGTGATGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGC