| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_81151
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78610 |
1 |
134 bp |
AK372857 |
Not available |
Available |
None |
CDS Structure of MLOC_78610
Contig Sequence (4690 bp)
>contig_81151 4690 assembly3_WGSMorex_rbca.fasta
AAGCGAGACTCAGTTTACCCAGGTTCGGTCCCTCGGGAGGAGGTAAAAGCCTACGNNNNN
NNNNNNNNNNNNNNATGGTGGTTTTGATTACAAGGAGGGTGTAACTCGCTTGACCTAGCT
CTCGATTCTCTCTAACTCGCTCGAACTTTCCCTCGGACTCGCCTTTATATANNNGTCGAG
GCCCTAGGGTTTACAAATTCTTGCCATCCTACTCTTGGTAGCTTTCNNNNNCTCTAAGTC
GTCGTGTTCCCCACGATTAGGAGCTTCCTTGTCGTTCCATCATCCACATGGTATGTTTGA
ACCGCCCTACATCTCCTGGGCCACTGGATGCATAACCAAAGGTCAGTCACCCCTTTGGTT
ACCCGGCCCATTAAGGGCGTGGTACGCACAGGTAATATCCCCAACACAAACGAAAGTATT
GAAATTATTTTGGTCACTAGCAATCTGCCCACGCTAGGTCGGATCTGACATGGCAAGCTG
ACGTGGCATAGAATCGGCCCGGTCCAATTCGGTGTTTTAAATGGGCCGAGCCCATTATTC
TAGCCCATTTAATGTTTTTTTCTCTTTATTTTGCTTAGTTGCATTGTCCTGGCCCAATAA
TCCCCAACATTTTAGCCTTTTTAATTTTGGGTTGTCGGCTTTTACTTTCTATTGAATTTT
TTTTAGCCATTTTATTTTATTACTGGTCCCACTAGTCAGGTTGGTCCCACATGTCATCCT
AATCTCAAAATTGGTCCCACACATCAGAAGTTTCAGAATTTGTCAAACAACTATTATAAT
TTAGACCCCCTTTGCCAGGTTTCCCTTTCACAGGTATTCAAATCACATACACAATCATTA
TTTCAAACAATCCAAAGATCAAATGAAATTCATCCAAAACAAGACTACATTAGTCTACTA
GAATCGTTACAATATACTACAACCCAAAAAAGCCTAGTACTGCCTACAATTACAACAGAT
AATATGCTACTCTTTGTTGATATGCTTCACAGCTTCGGACTTGGATTCGCACTTCACCTG
TGCAAAAAATATGAATGAACATATAAGAATAAGAATGTGTAAAGAACATCAAACTGTGGC
CAATGAGGGATCCAATAACTTATAAGCAAGAATTGACAGCAGAAGAAATGTACATAAATA
GTATCATCAAACCACCAGGATTATGGTTATAATGTAAACATATCATCAAACAAAACCTAC
ACAAATAAACATCACGACACATCAAGCCACGGGCGCAGCAGCGATAGCATGTGAATCAAC
GCAACACCAAAATTAGAGCGCTACCAGGAGGTTGTCTTTCACCGTCATGTGAGAGGCTGT
CATATTATGAATCTACACCATATTTTAGCCAAGTTTCATAGAGGAAGCATTTGCAAAGAA
GGGTTGTAACAGCAACTATACATGAGCAAAGTGCAATATTTTAATAGGTTATGACCATCT
ACATCGTGATGCACTTTTCAAACAACAATACAAACATGCTGATAGATTTAACATGGTCAT
AAATGACACCGGCAGATATCCCACACGATGTAGCATATAATTAGTACACACCACAAACCC
ATATGATGCTTTGAATAAAAGTTATGCCAATATGAAATATGCTAGATGATGTAAAACAAA
CACTAGAGGGGACTTAGCAGAATTGTGGTGGAGCTGGCTCCTATGATGCAAGAAAACAAA
AGTAATAGCAAAAAAATGTGGCCTGGAGGGGATCGAACTGCGGTCTACCCGGCATTATGC
TGGGGCTCAAGCAACTTAGGAACCACAGGGGATCGACTCAAAATGGCAGTCACCTCTAGA
GCGACATATGCGGATGAAAGAAAAAAAATATGCACCCTCGGCAATTGATCCCTGGCCGCG
GGGGAAACAGGCAAGAGCTCTAGCGATAGTGCTACACGTACGGTTGCTACCCTCTCCCAG
GCATTGCGCTACTTGAGCGAAACCTGTTCTAAACCTGACAAAACTGTTGAAAAATTGAGA
GAACAACGCACCTTTCTCTACCATCTCGCTGCAGGCTGCTCGTGCTACACAAGGTGTGGC
TGGACATAACTGACCAGGCTCGGTCTAGTGCAACAGACGGCTACAACGATGACTGCTCTC
GCATGGTTCCACGACAAGGTGGGATGCGGCTATGGAGGGGCTGTGGGCGAGCAAGCAGCA
ACACGGACACAGGTGAGGGTGTGCGCGTGCGTGCGGAACAGTAGCACGTAAAGTACTCAC
CTGCTAGAAACACTCCTGCAGCACTGATGGACAAGATGCTAGAAGTCAGGTAAAGTAGCA
TGTAAAGTACTCACCTGTAGCGCTGCGTGCGGAACAGTAGCACATAAAGTACTCACCTAT
TGGCCACACAAGATGCTAGAAGCCAGGTAGACACTGAAACAGGAGTTTGGCCAGAGTAAT
AGGGCCACTTCTCTTAGGTCTGTGATCAGTCAAGCGAAATGGACAACAGAATGACGTAGT
TAGTAAGATGTATTGCTCAAGCACTCCTGCAATAGGACTAGAACTATTTGCTCCAGGAAT
TTATTCTGATTCCTATGTACTTATTTATGTTATTCTAGCATGCCCAGTGTAGGTCTTTCT
TTTTTTCGGGGGGAACACTGAACAAACTAAATAAACAAAGGCACAAGTAAGTTCAGCGCA
GTTCTCTTGAGTTGAGACAGTGAAGAAAACTGTTGACAGCCAAGAAGATAAACACAAAGC
GATCTCTCACTCATATCTGTATATCATATATTTCTTTGAATACCACCAGAATGAAACTCC
TTGTGGTATTACAGGGAGGAATCGTACAGGCTCTAAGCACCCGGAACAAATGGAATGGGT
ACTCGATGGATTACCTAGGGAAAAACAAGTTGGCCGGCGCAGGAAAGTCCCACTGGCTGG
GCCACAAGTCCTCGCAGTCGGCGCGGCGCTACAGCAGCAGCTCCCCGGTGCTCTCGCAAT
AGATCCACGCGTGCACCGCGCGGTGGTAGTCCCCGTCCCGGTGCACTTCCGACCCGCGGT
GTGGGGGAGGAACGAATCTTCCCGTTGCTTTGTTGTGCTTCACATCGCAAACACATGAAG
CAAAATCAGTAATAGTTCATTTAGAGGAAGATGAACAATAGTTGGAACTTGGAAATGGTA
TGCAAATCAAGTATTCCAAAGGAAGATGAACTTTGTAATGCAGGCATCAACAGCACAAAG
ACCATCAATTGGCTAGTCCCCGTAGTTTGGGTCAATAAACACTAGTATCAATCATTTGTT
TTATGTACCAACGAACTGGGATTAAGCTTGAAAATTCTAGTACGGTTCAGCAGAAATAGT
TATACCAGTGCAATTGCTTTGGATGAAGTAATAACAGGTAATTGATCGAAACATACGAAA
TGCAACAGTGTTGCATTTTCTTTGCATTATGAAGGGTAACCAATAGGCAACATCTACAGA
GTATAGTTACATTGGCTCTCACCAGGAGAGCAATAGTATCTGGACCACAACTAAGCTACT
GTAAATATAATTAACACTGCACAAAACATGTACACAATAATGAAGATTTTGTGTATTTTC
TTCTTTACTTAGTTTTTCTACATCTGGTCATTCTAAGGCTTAAAGTTTGTTGATCATAGG
ATTAATTCAGTCGGTAAAAAAAATTAGTATAGCAGTATAAATTGTATTTGTAACTCGGTC
TATGTTGCAAACTCCACACAAAATCCTAATGTTCATGAAATGGCTGGACACAAGTTCTGC
CCTAAACATGGTGGCAGAACGAAATGGTGATAACATAAACATGGTGGCAGAATGAAATGG
TGATAACAGACAACCTGTTTTATGTTCTGCCCTTCACTCGAGCCCGAGGATACAGATCGA
GGAGTTCAGGCACATCTCCCTTGTATTTGAGAATGTACCTCTCCACAGAAATGGCCTCCG
GCAGTCTCACTATGCCCACCATGTTCACCTTCTCGATGTCCATGCCCTTGGACCGCAAGG
CCTCGACGACGCGGCAGCAGCGGCGCCATCCGTTCGTCAAGGCTCAGCGTGAGCAGCAGG
GGGTTCCTGACGATGGCCCCGGCGCTGCACCCGACGGTGGCCCTCAGGAACTCCACCTTG
CACCGCAGCAGCGCCTCGGGGCGAGCACGAAGCACGGCACGCGCCGGAAGGTGAGATGGC
ACGAGGTGGCAGTGGCTGCGGCCAATAGCGGCAGCGGATTACCGAATCTGGAGCGTGAGA
TGGATCTAGCAGCAAGCAGCAGCGAGCAGGCAGGCAAAGCAGGGGAAGGGAAGGGAAGGG
GATGAATGGGGAGGGGGTGGCCGTGCTTACGTGGACGGTGGGGAACTCGATGCTGATGGT
GGACTTGAACTCGAGGCAGAACTCGTTGCGGGTGAAGCGGGAGAGCAGGTTGGATTTGCC
CACCCCGGAGTCGCCGATCAGCACCACCTTGAATAGGTAGTCGTACTCCTCCCTCCGCCC
GCTCCGCCCCCCGCCGCCGCGACCGCCCGCCATTCCCCTCTACGTTGCCTTGCCTTCCTT
GGGATCTCTTCTCCGGTAAGCAAGACCTCTACTCCGCTCTGTTTATGTTACTGGACTGAC
AAGGAAGAGAGCGTACTCGTCGGTGAAGGGGTGGAGGCCAGGGTGGTGTTGTGGTTGGGC
CGGTGGCAGTGCTCGGGGAGGAAGGGGCGGGAGGGTGGCGGCACGATGGCCGCGAGCGGC
GGGGGGTATG
