Map Locations of contig_81021 (4108 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_81021

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78588 1 540 bp MLOC_78588.1 Available Available None





CDS Structure of MLOC_78588






Contig Sequence (4108 bp)

>contig_81021 4108 assembly3_WGSMorex_rbca.fasta
ATTGCGGAGGCCCGTGCCGGAGAGGGCAGAGCGATGGCGTGGTCAGGCGGGAGAGAGGGG
GCTCGCACTAGGAGAATTTAGCAGAGGAGGGGCCGAGGCCATGGCGGCAATGGAGGGCGA
GGAGAGCTCCGGGAGCTTATTTAACTGGTCGATGAGGATGCTGGGGTGGAGGAGAGGACT
TTGAGAGGCTCGGGGATGCCGGGGAAAGCTCGGGATTGCGGCTCATATAGCGGGCCGACC
GAAGCGGATAGGAACAGCCACCGTGGCGTTCTTAGACACACACTAGGGCTCCCGCGAGGT
GGCGAGCGCTCGGTGGTGCCGACCTGACACTCAATAGAAGGAGGGGACAACTCGGCAGGG
GAAGAAGCCAACGGAGAGGAAGACGACGGCGTGTCTCGGGCGGGACAGAGGCATGACGGT
GACCGCCGTGGCGCGGGGAGGAAGAAGGAGGAGTGGATAAGGGTTTAGGGAGGGGCAGGT
GGACGTTGCGGAGTCGTTGGACACGACCACACGGCCAGGGACTGACCACAGATGGCCGGC
CATGGGGATACAATGCGCAGAGCATCGTTTTGGCCTGCTCTACTTGTAGTCACCACGGCC
AAAGCATGTCCTGGCCTTTTCCTGGCTGTGGCATCTTATCAACCAGATGTCTCACTGCCC
AAATAGATAGTATACGGGGCTTGAGTCAACTAGAAGACTCTAGGGTGGAAGAAAATTCCA
AGAACAAATTCTAACATGGAAGTGTTTGGAGAGAACTAGAGAAGATTGGCTAAGGGTGAT
GAGATGAATTTTGGCATACAGGGATGGCCCACTAAGATGATCATGATGCCAAGATTTCAG
CACCAACGGACTAGTGTAGATGGTACTTCCTTTTTAACCATGTACTCTGGCCAGAAATTG
AAATGTTGATGTTGGGCAAAAATGGCTAAACGGATATGGCTCAAACTTGGTGGAGGATGA
TTATTTGAGCATAGGAAGCTACTGTAAAAACTTCAGCTCATTTGAAAATGCCAAAATGAT
ACTTCCTTCACACAGCTTCCAAAGGGGACAAAGACTTAGGAAAATTGTTGCGAAAAGATT
GATAGAGGAATTGAGCTGATTTTTGGTTTCCATGAAGGATTTATCAATGTTTACCACCAT
GAAAAGTTTCAACTCAATTAGATCAAGGATTAAAGCACTTCCTTTGCAATTTTCCCAACT
GGACAAATGCTTGCAAATGGATGTAGTGCTCAAAATTTGAACAATGGAACTTGGGTTCTT
GGTGGAAATGGGGAAGATATGGATATGAGAAGCTCCACAATTTATTTGGGATTTTTCCTG
CCTACCANNNNNNNNNNNNNNNNNNNNNNTGCCCAAAATGCAATATTGGCATTAAATAGG
AAAGTAAAATTTTCCTTATTTAACTGTGGCCAATATTTTTGTGGGAGCTCAGGATGATCA
CCAATAATATATCCACTGGTTTTCATGAACTGTGGAGATGGATAGATATTTTCCTGGATT
GAAGTCCTTTAACTGGCAGAAAAAGGAATTAATTATAGATGAAAAATATTGCAAATGACT
TGGCAATATTTTTGCATATCCAGGGTTTATAGATGAATGATGATCACTGGGAAAGGTTTG
GGAGTCAGAATATCAAAGGGAGTTGGGGTTCCTTTGCAACTGGAAGGATTAGGATTTTCC
TTACGATAACTCAGAAGGTAAACCCTTTGGGTGGTAAGGTTGGACCGGATGGAATATCTG
GTTGGATAGGGAAGGCAAAGCTAGATGACCATCTTCACATACCCAAGAGCTAGATAAATC
CAGTAGCACCGAGGAAAAAAGACGAGAGTCAAATCCCACAAAGAAAAAAAAACAGGAGCG
GCAACCAAGATGTTACACTAATTGATTTGATTCACCAAAATATTCGAAAACCATCGGTGT
CCAGATCCAAACTTGGACAAGTTTACATTGCCAAGTTTCTCCAATTATTCTCAAACTTTG
TAGACATGTTCTAATACCCTGATAATGCATCCACACCAAGTGCTACATCAAGGATACTAG
GTATACTTGTTCAAATCCCCTCAAAACCACTTCTGCTGATTTCTAGAATTTGGAATGTGT
GCATTGACAAATTTCCTCAATTAGTCCCAAACTTTTTGGGCATGCTCTAACCTTCAAATA
TGCCACCACCCCAAGTGGTGCATTAGGAGGAATAAATTTGCATGACTTTATCTAAGAAAA
ACCATCCCTACCTATTTCTAGGGTTTCTAGGGTTTACACTAGCAGCTTTTACCATATAAT
CTCAAAATTCGTGATCAATCCCATTTATACCAATGTTTCAGTCATGTTAAGTTTAATAGC
AAGGGGAATCCTTTTGCTAGCCCAAACATCTATCAAACACCTTCTAGTGGGATCCAAAGA
TCAATAATTGAGGCACCCCAAGTGTTCTCCTTGGGATGAAATTTTTACCACAACCCCTCC
TAGTCACCAGCCACCTCAAGTATCCAAAGCTCTTTTACAATTATTTATTTCCTCTTGCGG
CTTGTAGACGCAAGTGGGCGCGCCAGACCACGCCAAAAGGGGAATCATGCCGACAAAAGT
CGCGCTCTGGAGCGTGCTGCCACGCACCAGAGGGTTGACCTTGCGCCCATGGCCACCTCG
GGCCTCCCCCGCATGATAGTCGATGTTCCTCGATGTCTCGGACACGCCATGACCCTGTCC
ACATTCTCTTTCTCCCTCTTGATGGCTTCCCTCGCACACGCGCCAGCTGCCCGAGAACTC
CAATGAATGGCATCACACGTGCAAGCTTCTGGCTCCCTCCCGCTCCTCCTCCCATCCGCG
GGCACCTACCGCGTCCACAACCACTGTAGAAATGATCCAGGGCACCCTCGTGGACCGTGG
CATCGCCCTCGACCTCGCCATGCTCCCTGTCCACGTCGGGCTCCGACCACTGCTATAAAA
GGGGCCCGGACCTCCATCTCCTCCCCTTTCGCACACTCGCAACCCCAATTCTACCACTAC
ACCTTGCCCCCTCATTTTTTTGCTCACACACTCATATTCGAGCATTTGCTCCACCGCCTC
GGATCAGCACTAACCCAGTGGTACAAAGCTCCATTTTCCCTCTCGCTACCTTCTCCGTGT
TCCTGTGCAACCCACGGAGCTAACCCCATCGTCGTTTTGGCGAACTGCACATGGATCCGA
GCTCATCATCCTCAAGCTTTTCGGCTGCTCATACGTCGCCATCGTATCTATAATTTTTTA
TTGTCTCATGCCAATATTCTACAACTTCCATATACCTTTGCCAACATTTTATATTATTTT
TGGGACTTACTTACTTACCTAGTGCCGAGTGCTAGTTCATCTTTTTTGTGTGTTTTTTAT
TTTGCGGAAAATCAATATCGAACGGACTCCAAACGCGATAAAATTTACACAGATTTTTTT
TTGAATATATGTGAATTTTTGGAGTCAAAATCAACGCAACACACTGCCCGAGGGAGGCAC
AAGCCAACATGGTGCAGTCTAGGGGGTCGCACCCACATGGCTCACCCTTTAAGTCGGTTG
GAGCTCTCCTTTGGCCGCAAGAAAGATATTTTTGGGATAAAAATCCACTCAAAATTTCAG
CCCGATCGGAGTTACGGATCTTCGGATATTTAAGAAATGGTTTAGGGCTAGAAAACAGGA
GTCGAAAACAGGAGAGAAACACAAAGAGAGATCCAATCCCGGAGGGTTGCTGCCCTCAGG
GTGCCATGGCGGTCATGGACCACAATAGAAACCTTCCTCCCACCTAAGGAAGAGGCCAAG
GAAGAAGAAGAAGGAGAGGGGCTTTCTCCTATTTCTCGACATGGCGCCGGAGTGCCACCG
AGGCAACCATCATGACAGCGATATACGCCAACAACTTCACCGCCGTCACCACCAACTATC
TCCTCCTCTATGCAGCGGTGTAAAACCTCTCTTCCCCACTGTAATCTCTACTTGAACATG
GCAATTAATGCTATATATTATTATCCAATGATGTGTAGCCATCCAATGATGTTTGAGTAG
ATTTCTTTTCTCCTACGGGTTAATTGTGATATGATNNNNNNNNNNNNNNNTGTGTGTTGA
TATGGTGTTGTCCTAAAGTGCCTTCCGT