Contig Data
morexGenes
Links



Map Locations of contig_80631 (5080 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_80631

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78511 2 1601 bp MLOC_78511.2 Available Available LOC_Os10g36650.1, FRAME:+3, EVALUE:0.0, 13110.m03320 protein actin, putative, expressed





CDS Structure of MLOC_78511






Contig Sequence (5080 bp)

>contig_80631 5080 assembly3_WGSMorex_rbca.fasta
CGCCCTCGGCGTTCGCGGCCGCCATGGGTCCGACCTTGCCGACGTGCTCCGCTACCACGT
CCTCCTCGAGTACCTCTCCCCCGCCGACCTCCGTCGCCTCCCGGTCTCTGGGAAGTTGGT
CATCACGCTGTTTCAAATTCTGAAACAACTGCCTAGTTTCTGAAACAACGACCCAGTTTC
AGGAAACGGTTCGTGATTAGACGTTGTTCCAGTTTCTGAAACAACTGCCCAGTTTCTAAA
ACAACGGTCCAGTTTCAAGAAACGGTTATTAGGTCGAGGCGAGATCCAACGAACGAGCGG
CCGATGGATGGATAGCGCGGATCAGCCGGTGGAAGGTAAGACTTTTTCATAATAGTTTAT
CGCATGGTACAAATTTTCTATCTCTTGAATCAATGATGATGGATTGCAAGCCTGATTTAC
GTAGGATGATACTCTAACCAACGCTTCTTCGACGACTTATAGATCTTCTTGGACAAAATA
GCATAAATTGTACTACGTGCCATAGCACTGTCCAACCCAACATTGTGCATGTAAGTAAAA
TATTGACGGAAAGGAAAAAAAAGCGATTTTTTTCTTGGGGACAAAAGCGATTTTGTTGGA
TGGCCCAGACGTGCGAAATATTCCCCGCTGGCACGGCCGCGTAGACAGCGGGGCATCTCC
CTCTCCCTCTCCCTTCTCCAGTCCGTCCTTGCCCAACTTTCCAGTGCGTCACCGGCCTCC
TTTACATCTCATTCCCACCATCACCGGCCACCACCCTCGCCGCTCCCACGCCCTCGCACC
GCACCTATATCTCGCCCCTCCTCCTCCCCCCTCTCCCCACCCACCATTCGCCTGCGCCCT
TCGCTTCCTCCCGCCGCCGCCGACTTCCCCAGGTCTTCTCGCTCCAGGTGAGCGTCCGTC
CACCTCTCTCGAGTCCCCGGCCGCCTTCGAGTCGCTTCCAGTGCTGTTATTTTCCCCCCT
CCTTTTCCTACCGCTGGTTAGAGATCGAGGTGTCGTTGGGGCGGTAGCTTAGCCGCGTCG
CGGCTGCGGGCGTGCGTTTCGACGGTTGTTTCATCTCGTGTTTCTCTGTCGGACGCTGGA
TCCGATCAGTGGGACCAAGGGTTTCGCGGCAGATGCTGATGCTGATGCTTCGGGATTCAT
TAGCTATGTTGTTCGTTGGGGGTGGCGAGGGAGTAGTCTTGCAGTAGATCTGTTGATGGC
CGTGTGCTGCGCTACCAGGGTGCGAAGTTGGGCGTACTGTATTTTCTGAGAAAATTGCAG
ATCTGTAACGGCTAGTCGAAAATCTGAGTATTTGTTTCGTACTTTTGCGTCCATGTTCAT
GCAGCAATCTTGCCTCTCTTTGCATGTGTATGTCGTGCTGGACTGGTGGTGGTTGTGTGT
CCGTGTGTGTGATTGGCTGTTGTTATCTTGTGCCTCCACCTGAAAATAGTTTATGGACTA
GTAGTTCACAAAAGAAAACAAGCAGATCGATGGTGTCATTGTCTGACATGGCACCTTAAA
GTGGCAGAAATAACATGTTTTGTACTATCTGAAATTCCCTAGTCATAGGATTCTGTTTTT
TTTTTCTTTCAAAAAGGGAGAAAAAGAGCATGGTTGTTCACGAGCATATATGCCTTAAGG
TTCTCCTGTCTCGTCAGAAAAATGACCAATGCTTTGTATCAACCAGTCAGACAAATCATA
AATTGTCCAGTCTCTGTTTCAATCGTTTTAGCCACCAATGCATATACCAAAATTGATTGA
GAATACACATGTATCAGTAACATGCGTTAACCTACTACCTAAGAGATCAAATCTGATTGG
TCTGCTGGTGCTTCAGAGTTCGGACCAACATTTTGTTAGGAATTTGAATTTTCTTGAATG
ATGTATACTGTTGGAATCCGTGGAGTTGATATGTGTTATTCTATTATAATACAAGTGCCT
TTTGATGTACAACTAAATACTCTTGTTTGAATAATCTCTGTCATTTCAGTCAGTAACCTA
AGTAACTGCTGTAAATGTATTTCAGTGATTATTTTAGTTATCAGTGAAATGTATTTGGGC
TATATTAACTGGTAAATACTCGAGAAATATATTGCTGTCCTTGTAACTCACGTTCGTGTA
GGAAGAACAACTCTTCTTTCTTCGTATGGTCAGTTTAATCTGTATTAGTTGGCAGTTTTT
CTAGGCCCTGTTTGAATAAGCTGTTTTATTATATGCAGATCAGTTAACATAAATGGCTGA
CGCGGAGGACATTCAGCCCCTTGTCTGTGACAATGGAACTGGAATGGTCAAGGTAATTGT
GATTACTTGGTCACATTCTATAACATAATTTCTTATTGTGGCTGTCATATTTTTATCTTA
AAATTCATTAAGGGCTAATTGTTTTCATCTTTCATAGGCTGGCTTCGCCGGAGATGATGC
TCCACGTGCAGTTTTCCCTAGTATTGTTGGCCGTCCACGCCACACTGGTGTCATGGTAGG
GATGGGGCAAAAGGATGCTTATGTTGGTGATGAGGCCCAGTCCAAGAGGGGTATCCTGAC
TTTGAAATACCCCATCGAGCACGGAATCGTAAGCAACTGGGATGACATGGAGAAGATTTG
GCATCACACCTTCTACAATGAGCTCCGTGTAGCACCTGAAGAGCACCCTGTTCTTCTTAC
AGAGGCCCCTCTTAACCCTAAGGCCAACAGGGAGAAGATGACACAGATCATGTTTGAGAC
ATTCAGTGTCCCTGCCATGTATGTTGCTATTCAAGCCGTCCTTTCTCTATATGCTAGTGG
GCGTACCACTGGTAAGTGAAAAAAGAACAACTGTATTTATGTGCAGATTCTCTTTCGCTG
TTATGTCATCTTCATCAAGTAGAAACAAAATGGATTTATGCTCTGTGATTGCTGATCGTT
GCAATTTTGTTTTGGTCAATAGGTATTGTCTTGGATTCTGGAGATGGTGTCAGTCACACA
GTCCCAATATATGAAGGTTATGCCCTTCCACACGCTATCCTACGTCTTGATCTTGCCGGT
AGGGATCTCACCGATTCCCTCATGAAGATCCTGACTGAGAGGGGTTACTCTTTCACAACC
ACTGCCGAGCGGGAAATTGTCCGTGACATCAAGGAGAAGCTTGCATATGTTGCCCTCGAC
TACGAACAGGAGCTTGAGACCGCGAAGAGTAGCTCATCAGTTGAGAAGAGCTACGAGCTG
CCTGATGGGCAAGTGATCACCATAGGCGCAGAGCGCTTCAGATGCCCAGAGGTCCTCTTC
CAGCCTTCCATCATCGGTATGGAAGCTCCTGGCATCCACGAGACGACCTACAATTCCATC
ATGAAGTGCGACGTGGACATCAGGAAGGACCTGTACGGTAACATTGTCCTCAGTGGTGGG
TCTACCATGTTCCCTGGCATCGCCGACCGTATGAGCAAGGAGATCACAGCGCTTGCCCCA
AGCAGCATGAAGATCAAGGTCGTTGCTCCACCGGAGAGGAAGTACAGTGTCTGGATCGGA
GGGTCTATCCTTGCATCTCTGAGCACATTCCAGCAGGTAAGGGCAAAATTTGCCCCAATG
GTTGTTGGTTCTTGAGCCATTCTGCTATTTGAAAGTTTCTGACATGTCCATTTCTTGTGC
AGATGTGGATCTCCAGGGCAGAGTACGAAGAGTCTGGTCCAGCTATCGTCCACAGGAAGT
GCTTCTAGACAGTTGTTGCCAGACCTATTTTCCATGCATACCCTTGTCTAGTAGCATTAT
TAGGTGGTGGTTTTGTTGGACACAATGTTGGGCCGATGGCCTGTCTATGGGTGTATCTAC
TCTATTATGTGTGTAGTCTGATTTAATGGATTTATTATTGGATTCTACAACTTCATCGCT
GTTTCATCTGGTTGCTCACCGGGCGTTGGTTCTGCCTCTGAGCAAACTGTGCTGTTTGAT
CTTTCTCTGTATGGCTTTGCTTGGCAATTGCCATCGTTGCGTCCCACATCTATCAGGCTT
TGGCCAGCTGCTGGGAGCTCGGTGTAGTTTGCTTGAGACAACGATCTTCCTTTTTGTTGA
GTATAATCACACTTTTTGCTTGACGGAGGTTGAGCAATGAGCATATACATAGTTTGCTTG
CGACGATGGACCACCTTTTTATTGAGTATATAATCACACGTTTGGTGGACGGTAGTTGAG
CAAAAAGTCAGTTTTGCCAACTGAAACCGAGCACCGTATCGTCAAGCCAAGCCAGGGAGT
AGTTTTGCACCAGCTACGGCCAGCCCCACGCCAACTCCCGCATGGACGCTTTTCTTTTGT
GCAAGTTTTTTTTTTGAGGCTGTTCTTTTATGCAAGTTGCAACAATGTTATGCACATGCA
TACATGAAATTCAAATTCGAGGAAGGAAGAGAGGTACAAAGGAATTTCAGATACAAAGTT
ATGGAGAAGAAAGATGAAATGTTCTCTCTGATAGTCCACCCCCTGGGCACCACTCAATTG
CAAAATCTTTGCTTGGCTTGCGGTGCAATACACACCATGGCCTTCGGCTGCGCGACATGG
ATTGCAGGACCTTGCCTCGTCTTGCTATGTCTGCATAGTGCATTCCCTTGTGCAATCCGT
ACCAGCGATGGAAACCTGGCATAGATGCTTAACTGGTCTTACTGTACATGCAAACGCCCC
ATCTAATGTAGACACCTTTGAGAGGTAGTGGTCGCAGGAGATACTTCCACTTAGGAGGTG
TTTGTTTCCTAAATTTTTGCCCGTCACCTGTTTACGGTGTGCAGAGGCCGGGGCTTAGCC
TCATTTTCTAAAAAAAAACCTGTTTACGGTGTAAAGGAAAAACGTTACGCGCATTTGGTA
GCTTGACGCCGTAACCGTGTCCCTCTGTAAACAGATCCAGGCTTGCTATCGGTGGTTACC
GCTCACCTCCCAACGGTAAAGGTTGCCTTACCGGCCGACACAAGCCCTCCTCCGCCCCTA
CGAACCCTCGACGGGCTCCACTTCGTTGATGGCACCGTCTCACAACAGCAACGAAAACAT
GAGAGAAACAGAGAGAGATCCAATCTCGGAGGGGCTCTCGTCCCTCCGGGAGCCATGGCT
TCCAAGGACCAGAGAGGAGAACCTCTCCCCATCTAGGGAG