Contig Data
morexGenes
Links



Map Locations of contig_80446 (3421 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_80446

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78475 1 259 bp None Available Available None
MLOC_78476 1 239 bp None Available Available None





CDS Structure of MLOC_78475






CDS Structure of MLOC_78476






Contig Sequence (3421 bp)

>contig_80446 3421 assembly3_WGSMorex_rbca.fasta
ATGATCTTTTATATGATTTTCATTCATATATGTCATATTTCATAGCAAGAATAGACGAAT
ATATCACAACAGATGCTATATTTGAGTGAAAAAATATATATGTGAAATGTACTTATCAAG
TTCCCCCACACTTAAATATTTACTTGTCCTCAAGTAAAGGCATATGACAGAGCAAGATAG
TGAACAGTAAACTGACTAAAGAATGTCCAAGTGAAGTAGATATGTAAACAATGCATGCTT
TGAAAGTTGCTAGTGAAAAATAATGGTTAGGGGTGCTATAAACAATAGGGTACTAGTAGA
CTTGACCATTTTAATCTTTTACAATGATAGACGAAGATCAACAAGTTTAAATGATGATTG
TGCCAAAAGGTTCCTAAAGAGAGCATGATCCCGAGAACAAGAACTTAAACTTGTGATGAG
ATCACTTATTTACAAAAATAAAGCAATGTGGTTAAACCACTTATTGAATTTGAAGGAAGC
GATGACAATATGTTATTGGTCTAACGAAAGGAACATACCACCGATCTCGAGAACATGGTA
TACACCTGGCTCTACCAATTATTAGTTTTTTTGTTTGTCTCCCCAAAGGAACATACCACC
GATCCAGAGAACATGGTATACACCTGGTTCAACAATTACATTTTTTTATACTTAACTCCT
ATCTCACCCAACCAGATTTCACAAGCCACCGATCCAGGGAATATGGCATGCTACTGTTAG
GTAGATCAGATAATTATACATTACATTTTTTTTCAAACGAACAAAAACAAGAATCATCAC
TCATTAATGTGTGGTTCACATGCTACCGATCCAGGGAACATAGCATGCTAATCCATAGTG
GTCAAGTAATTGCTCTAAATGGGAACACATTTGGCACAAATTCAACATCTAAACATAGTG
ATCTAGTTGTATCAAGGTAAAAGCAAAAAATGGTGGAGTTTACTAGTGCTCTAGGGATTT
GAGCACTCGAAACAAATGACTTTCACTACTTTCAGCAAAGCAAGCATTGTATAGATCACT
AGTTTATGAGGCATTCAGAAATCAGTTCACAAATTCATATCAAGCATAATATGACATAAG
TAAATTTCAGGATGACACAATTAACAAATGTCACAAGAAACCCAAATATCAAATGATTTC
AGCATGTATCAATGTATGATTATTTCAGAATGGATCATGAAATAGCTCACCGGTCTTGGA
TGATGTAGCACCCTCTCGATCATCTCACCAACTGCAGCTCTTCTCCTCTTGCTTATCTCA
TGCCCGCTCCAACTTCACTCTTCTTCGTGTGTGTCCCTTGCTTCTCCTATTCACCATGCT
TTGAATCCACCAGGGTACCAAGGAATGTCACCTTGAACATGGTCACCATGTAGTAGATCG
TGCACAAGCAAAAACCTGAAACAACACTCAACAACAGAGACAATGCAAGCGGTTGGTACA
ATGCCCTCTAAATCATCAATAGAGTGCCCAATTATATATCTATAGCAATAAAGCACATGC
TTAGGATACTAGGAATCAGCAAACTTAATACTAGCATGGTGATGATATTTATCATTAAGC
ATAGGTCTAGCATGAGGAGAATAAGTATGATCAATAGAAATATGAGCAATGTCACTAACA
GGTTGAGTATCATCATCTCCAAGCCAATAATGTTTCAAGTCTACCTTCACTGATGGTGTC
ATGAAATGCAAGGTAGAAGCAAATAAACCATAAGGACGCATATCATCAAGAGGATTAGAT
AAAAATGTTACATCACAATCTTGTATGACGATTGGCAAATGAATCTCTAGTTCTTCATCT
TCAAGTACAACAACTTCTTTTACTTCTTCAGGAGTGAGAGATGATGGTTCTTCTACTTGA
TCACTTGGGCGAGCTCTAGATCATCTTGTGCATTGGCTTCAAATACATCTTCAATCTGAG
GTCTCTCTTCCTCTTGGCGTATGCTATCTTGCTCAACTGAATGTGAATTCCACCAACACT
CAGCTCAAGTAGTGATGAGATAGTACCTCCAGCATTGATATTCCTCTCAATCTTCCTCAC
TTCTTCCACTAGCTATTTCCCACTCTTGATCTTCTTAATTTCCTCTAGTATAACCTTCAT
AATAGGATCATCCTGAGCGCTCCAAGTGAGCTCGAGGCTAAGAAGTGTGAGCTTCTCTAT
GTCGTCAAAATCATCTTGAGTAGGCACTTGCATTGGATACTCAACATGTGCTGGAGGTGT
TGGCTCACCAAATGGAGAACCATTTAACTACATTGGACACATCTCTTGATGTTGAGGTAT
ATGAGTAGGAGCTGAATAGAGTTGTTGTGGTGCATAGTTGTGGCTCTCATGTTCATACCT
AAATCCCTGCATATGATTTCTTGAAGCAAATGGTGAGATCTCAGGGTTGTTGCTCCTATA
TGACATATTCTGGTTTTCAGGCCACCCATGTGAGTAATTGTTGTGGTATGAGCTATGTTG
TGGGGCGAAGCTCATGCCAAAACAATCTGGAGGGTAAGAGTAACCACGCTGACATTCAGC
GGGTGAATGGCCCTAAAATCCACAAATATAGCATGTAGGAGCAGCATAAGGATGGCCTAA
ATAATAACGATCATAACAACTAGGTGCATTCTCAACATTTGTACCTCGCTGATAAGCTAA
TTCATCTAATTGATGGGAAATCTTACTTATCAGGTCTTGAACACTTTCGGTGCTATTGGT
GCTATTGCTCACATAAGCATGATGATCGGAGTAGAATGCCATTTCCAAGAAGATTGTTCT
AACCTGCAGAAAGGAAAAAGAAATAAAGCGGAAATATACTAGAACAGGGGTTAGTTGTGA
AAGATATATCACATAAAAACGTCACAAAAAGAAAACAAGAAAAACCTAGTCTATAGCCTA
ACACAATAGCTCGATGCTAGTCCCCGACAACGGTGCCAAAATGATCGAGTGTAAGTACAG
TGAGGTTTTACGCCCAAACTGTGGGTTGTCGTGTTCTCCACAGGGACTGGGCAAATCAGC
GAGTATGCTGGGCTAAATCTAGGTAACAAAATATTTGGAATGATTGCGGGGAAATAAACC
TAAATTTATCTAAGATCGTTCCGGAAAATCGTCGATCAAGAAAATGCAAAACAAGCAAAA
TGGAGGTTCAGACTTTACTCACTTTTTTGGTATTTTCATTTTAATAGAGAAATAAAATGC
TAACACAAGCAAACATCGATGAATTAAAAACACATGAACACATATATAACTATCTAGCAT
CTAACAAAGGAAGGAAACTGAATTATGTGACAGGAAATAGATGATTCACATCACAAACAC
ACACATACTATATATATCACACGAACTTGATCTAACACGTGGACTATAAAATGGAACAAG
TTCACAAGATTGAACACGAACACAAGCTAGCGGAATAGTAACTCAGACAGTTAAATCGCA
C