morexGenes - Barley RNA-seq Database

Contig contig_80333

Source Contig contig_80333

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

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Map Locations of contig_80333 (2436 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_80333

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_78455	1	2354 bp	AK365291	Available	Available	None

CDS Structure of MLOC_78455

Contig Sequence (2436 bp)

>contig_80333 2436 assembly3_WGSMorex_rbca.fasta
CGCCTCCAGATTGCGCTCGGCCGCGCCCCCGCGCCCGCCCCTGCTGCTGCCCCTGCTCCC
GCGCCGGAGGGGGAGAAGGCTCAGGCCGATGCCCCTGCTCCTGCCGCCGAGGAGAAGAAG
GAGCCGGCCGAGGCTGCTGCTGCTGCTGCTCCTGCTGCTGCGGGAGAGAAGAAGCCGGAG
GCTGCGGCGCCCGCGGAAGGGAAGAAGGCAGAGGACGCCAAACCAGAGGAGAAGAAGGCA
GAGGACGCGGGTAAGAAGAAGTCGCCGGAGAAGGGGAAGAAGAAGGACGGCGACAAGCCC
AAAGACGGCGAGAAGCCCAAGGAGGAGGGCAAGAAGGAGGTGGCGGTGCCTCCTTCTCCG
TCCAAGGCCCCGCCACCCTCGCCGTCCAAGATGCAGCTGGCCACGGCCGGAGTCGCCGGT
GATCTCGAGATCCTTCCCCAGACTGCCGCCGAGCGGAGCATGGCCTCCTCGGGTGGCGGC
AGCGCGTCGTACGACCTGGTGGATCGCGTGCCTTACCTGTTCGTCCGGCTTCTCAAGGCC
AAGAAGAATCAGGACGGCGGCGACAAGCAGCCGCTGTACGCGCAGCTCTGCATCGGCGCT
CACGCCGTGCGGACTCGAGCCGCCACGGCCGCCGGCGAGTGGGACCAGGTGTTCGCGTTC
CACAAGGCCAGCCTCACCGCATCCTCCCTGGAGGTCACCGTCCACGAGGAGGCCAAGAAA
CCGGAGAAGGAGGGCGAGGCCACCCCGCCGGACGCACACCTCGGCTTCGTCTCCTTCGAC
CTGCAGGAGGTCCCCAAGCGATCGCCGCCGGACAGCGCGCTCGCGCCGCAGTGGTACACC
CTGGAGGGGCACGCCGAGGACGGCGCCCCTGCCTGCGACGTGATGCTCGCCGTGTGGGTG
GGCACGCAGGTGGACGAGGCGTTCCAGGAAGCGTGGCAGTCCGACTCCGGCGGCAACCTG
GTGCACACCCGCTCCAAGGCGTACCTGTCCCCCAAGCTATGGTACCTCCGCCTCAGCGTC
ATCCAGGCGCAGGACCTGCGCCTGCCGTCGCCGCCGGACGGCAAGGCGAAGCAGTTCGGG
CCCACCTTCCCGGAGCTGTACGTGAAGGCGCAGCTGGGCGCCCAGGTGTTCAAGACCGGC
CGCATCGCGCTCGGCAGCGCAGCGGCCGGGGCGTCCAACCCGAGCTGGAACGAGGACCTG
CTGTTCGTCGCCGCCGAGCCGTTCGACCCTTTCCTGACGGTCGCCGTGGAGGACGTCTTC
TCCGGGCAGCCGGTGGGGCAGGCGCGCGTGCCGCTGTCCACGGTGCACCGGCGGTCCGAC
GACCGGGTGGAGCCGCCGTCACGGTGGCTGAACCTGTGCGGCGACGAGGCCCGGCCGTAC
GCCGGGCGGGTGCACGTGCGCGTGTGCCTGGAGGGCGGGTACCACGTGCTGGACGAGGCG
GCGAACGTGGCGAGCGACGTGCGCGCGGCGTCGAAGCAGCTGTCGAAGCCGCCGGTGGGG
ATGCTGGAGGTGGGCGTCCGCGGCGCGTCCAACCTGGTGCCGATGAAGATCGCAAAGGAC
GGCGCGAGCGGGTCGACGGACGCCTACGTGGTGCTCAAGTACGGGCCCAAGTGGGCGCGC
ACGCGCACCATCCTCGACCAGTTCAACCCGCGGTGGAACGAGCAGTACGCGTGGGACGTG
TTCGACCCATGCACCGTGCTCTCCATCGCCGTCTTCGACAACGCCAGGTACAAGCAGCAG
AGCGCCGACGGGAAGCAGCAGCAGCACAAGGACGCGCGCATCGGGAAGCTCCGCATCCGG
CTGTCGACGCTGGACACGAACCGGGTGTACGCCATCAACTACGCGCTCACGGCGGTGCAC
CCGGTGGGCGTGCGCAAGATGGGCGAGCTGGAGCTGGGCATCCGGTTCACCTGCCCGTCG
TGGCTGACGCTGATGCAGGCGTACGGGAGCCCGCTGCTGCCGCGGATGCACTACGTGAAG
CCGCTGGGGCCGGCGCAGCAGGACGTGCTGCGGCACACGGCGATGCGCATCGTGTCGGGC
CGGCTGGCGCGGTCGGAGCCGCCGCTGGGGCCGGAGGTGGTGCAGTACATGCTGGACACG
GACACGCACGCCTGGAGCATGCGCCGGAGCAAGGCCAACTGGTTCCGCGTCGTGGGCTGC
CTCTCCCACGTCGCCACGGCGGTGCGGTGGGGCCACCGGGTGCGCACGTGGGAGCACTCG
CCGACCACCGTGCTCGTCCACATGCTGCTCGTCGCCGTCGTGCTCTGCCCGGAGATGATC
CTGCCCACCGTCTGCCTCTACCTCTTCCTCGTCCTGCTCTGGCGCTACCGGTGGCGCCCG
CGCGAGCCGGCCGGCACGGACCCGCGGCCGTCGCACGCGGGAAGCGGGAGCGCCCCCCGG
CGCGGCGGGCGGCGCGCGCGGGGCCCCCGAGGCTCG