Contig Data
morexGenes
Links



Map Locations of contig_80246 (3296 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_80246

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78438 1 2500 bp MLOC_78438.1 Available Available None





CDS Structure of MLOC_78438






Contig Sequence (3296 bp)

>contig_80246 3296 assembly3_WGSMorex_rbca.fasta
CCATTGTGTTGCAAACCACACATGACGAGCAATTTTAAGAACCACCACCGTTTTAGTGTG
AACGTAGAATAAATATAGTATGCCTGTTTAAAATCTTCCATTGAATGTATGGAAATATAA
AGTATCAATAATGTTCTATTTCTGAAAGGATTTTTTTAGTATCAGGTATAAAAAATAGCA
GACATATTTCGCAATACTTACGGTGCATAGCTGGTTAATCTATTCAGAAAGGGGAGAATC
ATAAGGAGTTGTTGCACTTTAAAGCTTTTTCCTCGGTTTCTTGTTTTGCTCATTTCTGTT
GACTTTTGTATGGCCAAAGCAGGAGCTTGGATGATGTTAGGTTGAATCTCGAGTTTCTTA
AGTACTTGTGATGGTATTCTCTTATATGTCTAACTAAACAGATATACATAATACAAAATT
TGTTAGTTTTCTATAACTTTACTGTGCATATGTGTATGAGTGTTATTTAGTTTGCTTAAC
ACCCCCTTTCTTTTTCTAGAATACCATGCCATTTTGTATTTGTACAACTTTCATGGAGGG
AGTGCAACATATCTAGGACTCACCATGACGACGTGCATTCTAAAAAAAGCATAATCAAAT
TCCTATAACTTAAGAAATAAGATCCCTTTACGACTAGCGGAACAATGGAATTGACTGTAC
ACAATCTTTCTTTCATCGCAATTATCCATGCTGATAAAGTATTCGTCCTTCATGTTTTGA
AGAATAGTTCAGTTGAATGTACAAAGTCGGTAACCTCATGATGAAAAGGAATAACCTGGG
ATGGTAAAGGAGACTAGCTTAGTCCATTCCTTTTGCTTTGCTTACTAATGATGCCCGAAG
ATGCAAAATACTAATTATTTGACCGTATATTTTCAAGAAAATTCTTTTTTTCATTATGTA
TACTTATGTTTGAGACGTGTGTTATTAAATAGAATCTTCATTCGGAATGTAGCTACTAAT
GTTTACACATATTTCTTTACAAGTTTAGGGTTTCAAATAAACTTAATGTTGATCTTTTTT
AAGATTATATTACACATGCGTTGCATGTGCACAATTACTAGTCTAATAGAAATTTGTCAC
ATCAGCCTGACCGGTGGGCTCCACCTCGCATAAACGGGCTTAGTCGAGGCAAATCCATCG
ACCAGTGTTATTTGCAAAAGAATTACAATAGCCACAACGTTTTCAATAACAAAAATATAA
CACGGTGTTTTCTGCAAACCTTGCCTTCAACGTGAAGCTTTTATGTAATTTATGTTAGAA
AGTAATTAGTAGATTAATTAGCAAAGGGATGTGTCCAACCCCGAACAGTCGTGTCTCTTC
TCTCTCTATTGCCAACACACGTGTTCTGAAGGGATGCCTCCGAATAGACACCTCTTCTTC
GCACCTCTTGCACATGTATATATACTTGAGAATCAATAAAAACATGACTAATCGTCAATT
CACTTTCATTCAATCTCGTTTTACTCTAACACGTTATCAGCACGCTCTCGAGTGGAGCGA
TTTTACAATAGGTCTGGTATTCAAGCAAAAATGGCCAAAGGCGAACGACTTCTGCGTGAC
GCGAAGCAGCTGTAGCGACCGCGGCATGCTGGTGCGGTACTCCGCGTACTCCGTCGGCTG
GATCAAGGCACGGGGCGGCTTCATGATTCGGGGAGTGATTACAGCAAGGCTGGCTGTGGC
AGAACGGCATGCATGCATGCATCAGGAAATCAGTTGGCAAATGCAAATCTGTTGTCTCCT
TGTGATTAAGAGCGGTAGTCCGATCTGGCAAAACCATGAACGGCTTCATCCTTGGCAAGA
GCTGCAAGAGGCTAACAACGCAGCGACATGCATCGGCAACCCATGATGCATGCATGCATT
TGTACAGGAAATTAATCATCAGAATGTTTATTCGGTTTGTCTTCTTGTGATTAAGAGAAA
TCTCATCCATTCTACCTTATGCTAGAATTGCTTCATCAAATCATCCATGAAGAGGCCGAC
TACACAAGGCGTTTCTTCTACTTGCAAAAATGATGTCCGGCGTGAGGCCTCGATCCATAC
GAGACACCCCGATAACAGAAGGCAACACCGGCCTCGATGAAACGGCGGCCTCCATCCCGG
AGCGCATGGCGACCCTCGGGCCCCATCGCTATCCTCCGGCGCGCAGCCCCGTCATGACCA
TCAGCCGGCTTCAACAGACAAGACACGAGTCACGGTGGTCCGTCCTCAGACGCGACTGTA
GTCCAACACGACGACCCGACCTCTCGATCACGCTTTACCGCGTCGCCCTCACGCCAGCCA
CGAGGTAACATCCTCCCCGGTGGCGACCCGAACGAATCAGTTAGATTCTTATCCACGCAA
AGGAAGACAATCCCTTACATATCCTCATTGAGCCCTCAGGCTTAGAATACTTTGCAGATT
AATCGTTATACTTTCTACGAATGAAATTACATAAATATGTTGGCTGCACTTTGAAGCCCT
CTCGCTTTCATATGTTACATAAATATGTAAATTATTAAGGTTTGCATCCATATGTAATGG
AAAAGAATATTGTGAGTGTCTTTATTCCTTCGGAATTTAAGACAATATATATGTCTTTGC
CGCAAACATTCCCTAAGGACCCGTTTTTGGAGAACAACTACTTTTGCAATTAATTTTAAT
TTTTGCAAATCGTATTTTAATTGAAAACAAGGATCGCATATTCTTATACTTAATATGACG
GCATCCAAGTTTATTTGTGAATTACAAGGTATTTGATGGCATCTACTGCATATTTTTGCA
GATTATCCATCACTACTGTAAGATCTACATTTTGTCATTTTGGCAAGATGACTATCTTCA
ACGTGCTCTTCTAAATATTAATGTGTACATAGCTCAAATTTTTATTTATGAATCACAAGG
TATTTATGACATCTACTGCACAGTTTGCAGATTATTCATCACTACTATGAGGTCTATATC
TTGTATGTGTTTACAAGATGATTACCTTCAAAGTGTTCTTTCAAATATTAATATTTGATG
AGACTACCTCAAGATATCATAAGGTAATACTGGCATCTACTGCAAAATTTTGCAGACTAT
CCACTATTACTGCAAAGTCTACATCATGTCATTCTGACATATGACTACCTTCAAAGTTAT
TTTCTTAAAAATAGCATAACATAAGGTGATAGAATTATGAACATCAATTGACAAAAGTCA
GAATATGTTTTCTATTACTGCGAGATCTACACCATATTGGTGATTATCTTCAAAGTGTTA
TTCTATATCAATTGAGGTCTACACATATAAGGCATCAGCCAAACAAGAACTTGCTC