Contig Data
morexGenes
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Map Locations of contig_7981 (2876 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_7981

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78350 1 518 bp MLOC_78350.1 Available Available LOC_Os04g41900.1, FRAME:+3, EVALUE:2e-49, 13104.m04120 protein expressed protein





CDS Structure of MLOC_78350






Contig Sequence (2876 bp)

>contig_7981 2876 assembly3_WGSMorex_rbca.fasta
CCGAGTTCCTCGTCGACGGGCTCAGGTCCTACGTCCGCGAGGAGGACGGCGCCGTCATCC
TGCGCATGATCGGGGGCCTCGGCATCGCCATCTTCTGCCTCGAGTGGGTCGCCCTCGCGC
TCGCCTTCGTCCTCAGGTACTACGCCTACGTCGACAGGGAGTGCGGCGGCAACCCCATGC
GCCGCAGCGCCAAGGTCGGCGGCGAGGACGGCGCCGGCAACTGGCCCTGGCCATTCCAGG
TCTGATCTCATCCGCCTCAAGGATGAGGACGATGCAGCAGTTTATGATGTGGTTGGAAGG
GGTGTCTGAAGGCGAGAAGAACTGAGAACTCATAGTTCTTGGGAGGAAAACTAGTGTTTG
GCGATATTATTATTCGTTTATTGGATTGGGTTGTATTGTGTGGTAGTATATGATTATGTT
GTAATGCAGCTGTTGCACCTCTATAATATTATTTGAAATTCATGTTCAATCGACTCCATA
TTTTTAATGCCACATGGAACATAGTATATGACGCCAGAAATGTTTCTTGAATCAGAAGTT
CTAGATCTGACCAAGTTCTGCAGCTCTCTTTGTGTGGGGATGCTTCGAACTAACATTTCT
TGCACGGGTAAGCGAAATATTGTCTCTGAAGTTTATTCAGTCTCCGCAATCAGTCAGGCC
GCTCGGGTTCATTTCTGTCGATTTCGATTGCCAGCTAGTCAAGGTGAATCCTGCCCGCTC
CTCTCGTGGTATTCGCGCAGTAAACAAGCAAAAATATCATTTACAGACAGGTCTTTTCCC
GTGATTTTTTGCCTTGAGGACATGGAATTATCTTCACAGAGTAGCCCATGGAGGATCAAT
GTCATTTGCAAGGTGGTACTCCATCATGTACTCATGAGCAATGACAACTTAGTTGCAAGG
ACTATCTCCGGTTAACAAAACTTTCAAGCAATGGTAGTCTCTCACAAGCACATTTAGGTC
ATTATGAGAACCAAACAAACCAAAATATAAATGCCAAATCCAGAGAGCCTCTCATGCAAC
TGCCTCAAAAATAATTGTTGAATTTTTTATATGCCCATTGTACAGAGCTTTCCATCCCGC
GGTACAATTATTTCATGTCGAGTACAATGCAATCAATTGATCCCATCACCCCTGGCCATC
CTCATTCTTCAGTCAAATCTAAGAGTCTCTCGGTGTCTTCATCATTCGGTTCTTCCAAGT
TATCCTCCCCATATATCTCAATCATGACTTATGTGTATATTTGAACAACCTCTAAGATTG
AATCTTCCCTAATAGAGACATAGTCATCAATGGCGCGAGTTTAACAACCATATACGGCCA
CTCGAACAACCGTGACACACTTCATCGATGAGCTCGCACTTACCACCCAATGCATTCCTC
AATATAAACCATGGATCATGCCTTTCAACAGCTTTTGGAATGGTGAGGAAACGACCTTGG
TGCATCTGAAATCCCCGACGAAAATACTTCACTAATAGGTTGCATTGGGTGAAATGTGAT
CCTTCATAAGCTTCTTATGGTCATGTGCTCTATCTTAAGTGAGGTACAGGCTGTCGAATT
TTGATGCTAGTCTCGGTCGCCGGAAGTCCTCGTTAACGATCGTGACAATGGCCATTTCAA
AATCATCATCGTCTTCTTCCTCCTCCTTTGACTAAGAGTTGTCGAGTAACATCTCTATCA
ACCTCTTCATCCTTCCTCCTATGCCATATTCTAGGTTGATTTTGATTGAAAAAGAGTAAA
ACACAATGAAACATGCCTAGTCAATTCATCGAATACTTTGTGGGCGGAGGAGATGAGAAC
CTCGGCCGTCGGCATTGACGCGATACCGAGGCTATGGGTCATCGTCGACAGGGCTATGTG
ACAGTTCTGATGACTTCGCAGGAGGAAGATCTCCTTAAGCCGTGCTCGTTAGTCGCTACC
CAAGCTCGTCTCGGCCAAACTGCAATGAAATTTATTTTGACTGTCTCGCCGCAACTCCAC
CGCCACCTAGCTCTTCGGAGGGTGATCTACGACATCCTGATCATCAACCGACTCCGTTTT
GGAACAAATCAAGCTCGGAGGTGAGTTTTTCCATTTAAGGGATGACATCGGCAATAAGGG
TCGATCCCGATGATGGCGAGGACCGATGAGAGAATTAAAGTGGGCAGGAGGTCAGCAGAG
GCAATGGGGTGTCGGCAGAGGCTACGAGTGGAAGCCAGTGGCAATGCTCGCGACAATGCG
ATAGAGTGGGCACAGAGGCCGAATTTATTCTAAGAATCCGCCGCAAGTGCTTATATCTTA
GGGTCAACTGAAACGACACTTATAAATTTTGAGAAGTTAAACTGGATATAGAAAAGTAGG
TTGTCAAAGTGGTTAAAGCCTTTAAGGGATTGTCTAGGGATGCTCTTATGTAAGATCGAG
CAAGAATCGATGCCTCACCTCTTCTGCAAGTGTCGGTACGCCAGTGGCTACCGTAGGTCA
ACATGGCACCCGTAGGGTTTGGGTACGGATAATACGTGCACAAACCCGTACCCGTCTCAC
AAATTTCCGTCCAACCCCATACCCGTACCCGCGCCCCGGATTTCAAACTTTTCCCATACC
CGTACCCAGCAGAGTACGAGTAATACCCGCGGGTAAAAATACCCAGCAAGACACGTATAT
TGGAGCATTTATATTTTATATTTTGACTAAATTTCAGCATGTATATTTCAACATTTCAGC
ACATATATAACATTTCAGCACAAATATGTTAGATTTAATGGGCTTGGCCCATCTACAAAT
TATGAAATCTCAAATTGAGCCCATGAATAAAATGGCAAGTGGTGGTGTGATGGTGCTAAA
GTTTAGTCACATACCGCTAGTGGAGGAAGAGTGGACCTCTTTATATAGTGAGTTCT