morexGenes - Barley RNA-seq Database

Contig contig_79647

Source Contig contig_79647

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_79647 (1606 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_79647

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_78319	1	472 bp	MLOC_78319.1	Available	Available	LOC_Os02g08300.2, FRAME:-1, EVALUE:2e-24, 13102.m00956 protein RAD23 DNA repair protein, putative, expressed
MLOC_78318	1	825 bp	None	Available	Available	None

CDS Structure of MLOC_78319

CDS Structure of MLOC_78318

Contig Sequence (1606 bp)

>contig_79647 1606 assembly3_WGSMorex_rbca.fasta
AATATCATCTATTAGCATCAGAAAATTGATCCAAATTCAAAATTCAGATGGGGAGAGATA
CACACAGAGTACAGATAGTCAATGGCACGTTCTGGATTGTTATAGGCTGCACGGAGAGCT
CTTTGGACCTTATCTCTATCCCAACTGCCACCCCCCATCTCCATTATCTGGTTAATCATT
GTGTCCAGATTGCTTCCTGACAGTAAATCCGATGCTGCAATATCAACTGTGCTCAAAGGG
GTCCTAACAAAAAAGAAAAAACAGTTTTACATAGCAGAATTAGTAAATTTAAAGGGAAAT
TGCTCGGTTCATATTCACATGACCAAGACTGCGAGACAGATTGCAGGATCATGCCATGCT
ACTATTATACAACCATTTCAGATCTATACTCCATGCAGTTACAGCAATCCCAAAAATTCC
AGTTTGGGGCCTAACTTCCCATTACCCAGCTATGCAAATCGCTGTTACAATGGCTCTGGA
TTTTCATGCAGTCCAGAAATACACCTAGTTATGTTCAGTGCTTCTAACTTCATATCTACT
CCCTCCGTCCGGAAATACTTGTCCGAGGAATGGATAATAATGGATGTATCTAGATGTATT
TTATTTCTAGATACATCCATTATTATCCACTTTTGTGACAAGTAATTCCGCCAGCGCAAA
AAAAACGCCCAGTCGCGCCCCCAGGAGCCCAAATTTCGCCGATTAGGGCCCAAATTGGTG
CCGGCAGATCCAGGCCGAACCCAGCGCGCTGGGGGCGCCCGGGGAAAGGAATTTGGCACG
AAAACAAACCACGCCAGATTCCTCCCGTGTGGACCAGCCGAGTCAGCGACTGTGCGTCAC
CGAGAGCCTTTGTCGTCCTCATCGCCTCGGCTACCACGCCGGTTGGGTTTCCAAGGTCTT
GCGACGCACTAATGGCGAGCCGCCGCACGTCCCGCCCTTTCCCGCCACGTGTACACACCA
CTCCCGCTCCTCTCCCCGCTATAAAAGTCATGCCTTGCCGCACACTCGCCATCCATCCCC
ATCTCTCTCGCCTCCACCGTCGGAAACACCCCCCGAGGCCATGGCGGAAATATTCCCCGA
CGACGGAGCGGCGGCCAATGGCTTCGGCCGCCGGTTTTTGCACGAGTTGGAGGCACGCCT
TCTCCACGATGCGAACTACCCAACGCCGCCTGACATGCGTGTGCCGGGCACATGGCGGTT
CAGCACCGGCGGCATCCCCGTTACCCCCGCCACCCTCCGACGCGGAGCGCCACGCCGAGA
TCACGCAGCTCGGGGAGTCCTTGCCGGAGGACGCGGGCTAGCAGCAGAGGTATGCCCCCG
AAAACCAGCCCCTGTGGACGGCGTATTTCCAGTGCCACCTCGCCGAGCAACTGGCGTCGA
CCAATGGCGCTGCGCCGCCGAGGGGGCGCCACAACTCCGACGGCCGCCGTCAATGATGGG
GCGACCCAAGGCGCACGCTCCACGCCGTCCTCTCGCACATCGAGGGAGGCAACGAGTCGC
CGCTAGAGTATCCGGCGCCGTCGTTCACACGCTGGAGCGGGAGCTAGTGGCTGCTGAGGC
GCATGCCGCCGTCGTTCACGCTCCGGTGCGGCGACGCCGCTCGTCG