| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_79609
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78307 |
2 |
861 bp |
None |
Available |
Available |
LOC_Os04g08340.1, FRAME:-1, EVALUE:2e-19, 13104.m00751 protein OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
CDS Structure of MLOC_78307
Contig Sequence (3287 bp)
>contig_79609 3287 assembly3_WGSMorex_rbca.fasta
TCCGTGATCAATTCCCTCTCCGGCATTTTACACTACAAGAAATATGCTAACTTACGACCT
TCAATATTTGTCACCGAATGGTCATTGATTTCCATTTTTGACCTTTTTACAACCAAAAAC
AGAAAGTCAAAAGCTGAGGGTCTCTAATGAACTATAACGACCTTTCTGCTGCAATTGTCA
TAGAATTTTACGACCAAATAAAAATTCGTTGGTTCTTCGGCCAACTGTTTTGGTCGTTAG
AAGTCTGCCCAGGCCACGTTGGATCCAACGTGGCAAGCCGACTTGGGAAAGTTACGACCA
ATCAGATTGGTCGTTGATAGGAATCGGCCCGGTCCAATTCGGTGTTTTACATGGGCCGAG
CCCAACAATTCAGCCCATTTAATATATATTTTTCATGATAATTCTGGTCAGTCGCATGGG
CCAGGCCCAACAATTTAGCCTTTTATTTTCTGGCCCTGGCCATTTATAATCTATTGATTT
TCTATTTTCAATCATTATATATTCAAGTTGGTCCCACTAGTCAAATGGGTCCCACTAGTC
AAATGGGTCCCACTTGTCATGTTCACCTCTCAAATTGGTCCCACATGTCAGAAAAGTACA
AATTTGACAGATTATTTTCATAAGTGGCCTCACTGGTCAGATTTACATTTTACAAGTTTA
CAAATCACATTCATAATCAATATTTCAAATAGAACAAAGAACACATAAAACTCATCAAAT
ATACCACTAAATAAATCTATTACAATATTTACAACACAGATATGCTACAATATGCTACTC
TTCACGGCTTCACACTTCACGGCTTCACACTTCACGAATATGCCATCGTTGTTGCCGACG
TCTGGATTGGTGTGTAAGGAGGAAGCGGTCTGAAGCAACAAAAACTGAGAAAAATGTAAA
GTATCAGTCACCACAAACACATAGGAAACAGTACTGGATACAACTATTGCTGCATATAAA
TACTGAACTACAACCACAAACAGCTTTAAATACTACACTACATAAATACTGCAATACATA
ATACATCAGCATGGTAAAAATGTACTACAATATATTCACACAAGCACACAGAATTACATT
TACTTAACCTGAAACTGAACTAACTTTGATATCATTCAGTTTTTGAATGATATTCACACA
AGCACACAGATGTATATTCACACAAGCACACAGAATATTTCATTGCCACAACCATGTATG
GTTGATTGGACAGAAAGGAAATTTATTTTGCCATGCCATAGTGTGACAATAAACCATGAG
TGTTATGATATGGCCAGTGCCAACAAACCATGAGTGTTATGATATCCTACGGAGGGGAGC
AGGCCGTGGAAATGCGTTTGACGCCGCTACAACACCGCAGCCCGTGTTGTACTTGTCCGC
ACATGCTCTAGTGCAGCTCCTTGCTCCTTCTATTTTTATGTATATATACGTGCTTTCATG
AGATTTCACACTGTGATTTGTGCAATTTTCTTTTTCTTTTTTACATGTGGCCGCACCCTT
CAGATTTACACCCCATGTTAACAGCGAACGGGAGGCATACCATGTCGAAGCCGTCTTGGT
AGAATTACCTTGTAATGCCTCTGTAAAACTATCTTTACGGAGTGAGTGCTAGTGATCTAC
AAGATCTTATATGACTTTACAAGAAGAGTACTGCTAGTGATCTAAACCATCTTATATGAG
TTTATAAGAAGAGTACTCGCAAAGAGGGGTACATTTTGGAGCAAGGCCTTATCGTTTCCC
CCCAGCGATTAAATGCAAAAGTTTTCCCATCATCACGAGAGGAAGGAGCTACGCATGCAT
GATGACATCTACTGCTCCATCTGATAAGCACGCAGAGCAGCGACACAACATCAGCTGCTG
CTATGCTACAAGATATAGGCTACACATACCAGAGACCAGAGATTCATTCAGAGGAAGAAA
TATCAAACCACCACCGTATAAAAAGGCAGCAACAGTATAGTAGAGATCACGGAGAGCAGC
AAGCAAACTCATAAATACCATCAAAAAACTGATTCAGGAGAAGAGGAGGAATGTCTTGCT
TACGGGGCCGTGGATGTGGAGTCCCAACTTGCACTGCCATTGTCCCCTTCGACCCAGCAG
TGGCCTTCCGGAATCTTGCGGATCTCCTCCTTGTCCCGGACGCTGATCCAGTCCCCGGGC
AGCCCAATGAGCCTCTTGATCGTCTGGCTCCGGTGGTCCACCACCGACCTGCACATTGCA
GCAGCACCAGAGGGAGAAGAATCAAGATCCAGTATCCATCAGCACCAGGATCAAAAGAAC
GGTCAGGACAAGCAGGTTTCTTACACAACGACGACAACCTCTCCGCGGGAGTAGTCGTAG
AGGGGGCTCCGCTTCAGCAGCGCGTATTCGAGTCCGTCAGCCCACTCTGAATGTAGCGCC
CGGCGGAGGAGCTCCAGAGGCCTCCTCCATGTGTTGTTACCACTCCTAGCGCCCGAAGCC
CTCCGCCATATGGATGGGCCTGGCGTGCGAGGACGCTCGGGCTCCTCCCACTTCTCCTCG
ACAGGCCTCCTCCGTGCGTTGTTCCCACGCGAGCCCTGCATGTCACCCAAGGAGAGGAGA
GGAGCGCATCTGTTAGGAACCGCGTCCAGGAGAGGGGCGAGTGGGAAGGGAGGAAGGGAG
GGGAGGCCACGTATGTGGTCTGTGCATGGCATCGTGGCCATGTCGTAGTCGTCGATGGTG
GGGTGGGGACGGCGGCGGATCAAGATATGAGGGAGGGTGATGGGGATCGAGGGGAGGGTC
GGGCGCCGTTGTGAGGAGGAATGCGAGGGAGGTTAGGGTTTGGGTAGGTGGCTTCGTGTG
GATGGATAGATGTATGGATGGATGGATGTGGGATGGAGAGATGAATGGATGGATGAACGC
CATGTCAACGATCCGTGTGACAACAAATTCCACCAATGAGAATAGACCACATATAATTGT
ATTTTTCTTTTGCTTTCTTTTACTTTTTCATATTAATAATTCAAAAAATGATCACATATT
GTGCACAAGGATGCATTTTGGAATTTTAAACAATGTTGCCTAAGAAAGTTTTCATTTTCT
TTGGACGAAAAATTCATTTTCCATTTCTCGAATGCCCAAAATGAGTTTTTTCATGAATGA
CATGCCATATATTTGTTGTACAATTGGACCAAAGCAATTTTCTAAAATACAAGGCCACAT
TTAATGTATAATTCACTAAATTTTTGGGTGTCAAAAGCTTTGATCCACCTCTCGTGCAAA
AGACAAATTTTCGTCGAATCACTTGGAAGCACGTCAAATTTGAACTG
