| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_79514
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78287 |
4 |
1665 bp |
MLOC_78287.4 |
Available |
Available |
LOC_Os08g30480.1, FRAME:+2, EVALUE:7e-42, 13108.m03153 protein clathrin adaptor complex small chain domain containing protein, expressed |
CDS Structure of MLOC_78287
Contig Sequence (5093 bp)
>contig_79514 5093 assembly3_WGSMorex_rbca.fasta
GGGACTAAAGGCAAAGGGCATTAGTGACAACCTTTTTGTCCCAGTTCCGAAACCGGAACA
GAAGGTCCTTATGAACCGGGACAAAAGACCCTTTTTCTACTAGTGGTTCATTATTCTGTT
GTTGAAAATTCATTATTTGATTTCTAATGGAGATGATCTTAGAAGGAGGAGTATAATTGG
CAATAAAAGCATCTTTACACTTATCCCGTGTTCCAATACTTTTACATGGTAAAGATGAAA
ATGAAGGTTTAGCTTTCTCTCTTAGTGAAAAAGGAAACAATTTTATTATCACAATATCAT
TATCCATGTCCTTTTTCTTGTGCATATCACAAAGTTCAACAAAGTTATTGAGATCTGAAG
CGTGATCCTTGAAAATTGCTCTTTCATGACAATATTCAGTAATGTAGAAACAATATCCAC
CACAAGAAATATGTCAACTTGTGACCTTCTCTTAGTGACCCCAGCAGAATTGGCCGTAAA
TCTATGACCATTTTGCTAGGAAGGATCAAACCCCGAAACTGCATTACACCAAATGGCCAT
AAAGTAGACAATAGTTGTCGACGACCTTATTTCTACATGATTACGACCAATATAAATGGT
CGTGAGGTTATGAACGTGGATGCACTGGTACTTAAGACCACCTCCTTTTTATATGTATAG
AAAAAATGTACAATGTGTAAAAAGAAATATAGACATCAAAACGTATGTATGAAAAGATGT
TTTCTGTTGCGAATTTTGAAAAGATGATAATCATGTATTTAAAAAATGTTAACATATATA
AAAAATTCATGTGAGCTCAAAATGCAATCTTTTTTTTAGGACTAGAGTAAAACAAGCTTA
CTCCAGTATAAGGATACATTCAAAGATCATGAGTTCCTTCAGTCTAGCCGGTACAGTATC
AATCAGACGTTGATCTCCAGTGTGGCGAGCATCAGCAGCCAGTTCATGCGCTAGTGCGTT
GTAGTCTCTGGGCACATGGTTCACCTTGTGTCCCTCAAAAGCTGCAAGTGAGGATTTGAT
ATCTAAGATTAGTCCATAGGTGATCACCCTGCTCGGCCTACTGTCCGATAGCTCAACCGG
CAGCGATTTGCAGTCAGTCTCCAAGTTAACCCGTCCACTGTAAACAGCCCGGAGCGCCTG
CAGACCCATCAACGCAGCCTGTCCTTCAGCCTCGTCTGCCGTTCTTGAGGATGCAAGTCG
CCTGGTGACCGACGGGAGCACCTGTCCAAGGTGATCCCGTGCCTGTATTCAGTTTCAACT
TTCAACCAGCCCGCCGCTGGTGATGTCCATTTCCTGTCATTTTTGGAGGGGCCTTCTGCA
TGTTTCTCGACGGCTATTGCTACTTTACTAAAAACTAGTTAAATGCCCGTGCGTTGCCAC
GGCATACGAAATATTATATGAGAAGATTACTTGGTAAAATGATTCACACAGAGATGAGGA
AGCAGATCGACTGTAGCGGCGGACCACCGGCGAATCGGCATGCGGCGGCCAATAGATTTG
GGTCTCGGGCCTGGAATCTCGTCCGGGGCAACTAACATTAGGCCGAGTATTTTTCTTATT
TTTATTTTTTCAGCGTATGCATTCTACTCTGACTCGATCAAAAAAAAGATGTGGCCCTGA
ACTCTTTTACCCAAAACTTTTGCCTCTAACAAAATATGCATCTAAGTGAGTAAATCTAGT
AGTTCACTTGTAAAAAAATTAAGGTTGCTTACAAAATATCTTAAAGAATTAAAATGGATT
GATGTAAAAAAGAGAATAAAAATGAACACACGGTATGACTAAATTATGAAGCTCCGCGCG
GCAACCAAGACTTCACCAAAAAAGCACCCTTTGACGAAGAAGGATCCTTCTGTGCCACCC
TAGCCTTAAGTTTAATCATCGTCGATGGATCTTTCAGCAGCCCATTTGTGCATACGCAAA
GTCGTAAATTTCATCATCATCGATTGCTCTTCAATCGGCTCTTCTGTCACTTTAGCCTTA
AGTTTTATCATCGTCGATGGCTCTTCTATGTTCTGTTCATTTGCTTGATATTCTTCTCTC
AGTTCAACGCGCTCGCATAGCTTGTCATTGACATCTTTGTACTACTCCCATCGATGCAAC
ACCAGCCTTTTAACCCTGTCCCCAAGAGAGGTGTCACGACGCGCGTCCTTCCTAACATCT
GAGACAAACATAAATAGATATATCGGAACACAACAGAACAGTTCGCTTGCAAAAAATATG
TACGTCGCTAAAGAGTTACCTTCTAAATCATCGCCCGCGTGATAGGAGAATATCGGACAG
TGTTGAAATGTGAGCCGGGATGTTTCTGTTTCAATAAGGGACCCTGACATACATTCATAT
ATAGTTAACATAGTGGCATGAACAATCAAATGCATTATAAATCAAGGTAACCAGCCTTAC
TGGATGCATGATCAACCTCCATGTTGAAGGCTTCAAGAATAGAAGCGTTGTACTCCGCTC
GTTTCAGATCTTCCTCGTATAAATCTAGTTTATTGACAAAAAGTCGAAGAAAAAGTATTT
CATAATTACGCGCGACTATTGCTATTTTTCTCATTCCATTGGATGCATAATAATCCGTTT
GAAGTTGGCCAACGTACATTACTACGCGAGAAACATCTAAAGAAATGAAAGTTAGTTTGA
TAATGATCCTCAGCCAGAGGTATTGTTTAGAGCAAGAGCAAATTAAATTAGAAACAATAC
CAGTGATCATGTCGTCATTTAGATCAAAAACATTCATCTGCATTAACAATGTTAACAAAA
TAATTAATGAGCTGATTGCAATTATGATATATACACGAAGAACTACATGTCTACACTTTT
CTCATGATTATGATGATCATACTTCCAGTGCAACATACCTTTGAACCGTAGGCGATGTGA
GCTAATCGTAGAAAAGAAGGAACCTAATGCTTGTGCTGTTTAGTATGTAAATTATCATAC
CGTGCTTCATTTTATAGGTGAAGGACATGCTACAATGCTTGGTGCGACGGACTTCAGCTA
AAAAAATTGAAGATGGACTAAAACAACACTTCCTCACCGTGCATGTCGTCAACGGAAGAT
GTGGACATCCTATTTGCTAGCTAGTGCCGTAGCTAATGCATGCATGCTTAACAATTTTTT
TTGTTTTGTTTTGTGGACAGTGCCGTAGGTGATGCATGCATGCATGACCATCTTGTGGCA
TAGCTGGTGGCGCATAGTCGGGCCTCATAGTCACACAATTTACTAATTAAGGGTATGATC
AACATGCAACCGCGAATTAAGCTGTTGACCGATTGGATTGCCGTTTTCCACACTTCTACG
GGTGTAAAAGATATAGACCTTAATTGATCGTTTTCTGAAAATCACACATGCGTGATAGTA
TACACTTGTAAAATTAAGAAACGTATATAATTTTACCCCTATTCCAAACAGGACCTAAGG
TAGGCAAAAAAAAGAAGGCGGGGAACTGGGTACCTCACCGACACCTGCCGACACATGCTA
TCCACTCACCCTCTCTCTCTCTCTCTCTTCGTCTGTCTCTCTTCACTCCGTTCTATCCAC
TCACCTACTCCTTCCCTCCTGTCTCTTCCTCCACCAGCCCATCTGTGGGTGCCGCCGGAA
GAAAAATCCGCGATAGAAAGAGGCGGAACTGTTGACGAAGCCTGGGAACGAAACAAAGAA
GCGTCGAAAGGGGAGGGCGAGAGGAAGGAAGGGGAGGGGCGAGAGATGGGGATCCGGTTC
GTGCTGCTGGTGAACAAGCAGGGGCAGACGCGGCTGGCGCAGTGCTACGAGCACCTCTCC
CTCGACGAGCGCCGCGCCCTTGAGGGCGAGATCATCCGCAAGTGCCTCGCCCGCACTGAC
CAGCAGGTACTGCTCCCCCTCCCATCCGCGCCACCCTCCTGCCAGCGGAATCCAACGCCT
ACCTGTAGTCCTCGCCGCCCCTCTTCTTGACCTGGATCCAGGAGCCCTGGCTTCATCTTG
AGCCCGAATCAAGAACGACGTTCCTTTGGATCTGGATCAGGATGGGCTGTTGTTTGCCTC
GATTTCCATGTCCGTCTCATGGGAACTCTGTGCCAATGCAGTGCTCTTTCGTGGAGCACC
GTAACTACAAGGTCGTCTATAGGCGCTACGCCTCCCTCTTCTTCCTCGTCGGCGTGGACA
ACGATGAGGTGCAGCACTCTGTCCCGTCTTCATAACTTCATTTTTATTGTTTTCCGGTCA
CACCAATTAGGCTGCCTTAGCAAATCATGCAGTCGATTCAGGCTAATGTGTTGTGCGCTC
TGCTCTAATCATCTGGTTTTGCTAGACGGAACTTAATTGCAACCATTTTTTTTGCTAATT
GAAAGAAATTGTATACAAGTAAAGTCAGGCGGGCTACCAGAAGGTACCATCAGATCACCA
TATCTAACAGGACAATTCCCAACAAATTGACTAAAGAAGCTATTTGCTATGACCAGGGGA
ATGACAAGGAAAATTAATAACAATTTGGTCCTCGAAATCACCCTCCTACGTATTGGAGTG
GTGGAGCCCATAACCGTGCTCTGTTAAGCGCTTCCCTTGCCATCTGATTTAGTGGCTCCC
TACCCTTATGCAGCATATTTTGGACACCCTTTTTAATGTGAGAGCTCTTGATGATCAAGC
CAATAGCATATGTTTTATGCCATTGTTAGCACATTTCAAACATTTCCTTTTTTTCTATAT
TGTGAGAACAGGCGTCCGACAGGTTCTGCACCTGCATGCTCTTCTCCATATTCCATGAGG
TATTGCATCAGGTACTCGTCCACCGGGTCGGTTAAGTAGATAACCTGCCAGAGAAAACAT
ATTGTAACGTTGGTATTCATCTTGTAATGTTGCTATCTCAAACAAACAAACAAAGTTGCA
AGAATTTGCTCATATAGCCCCCATGTATGAGCTAACACTAAAGTAGGATGCATAATTATA
TGAGCTAACACTAACGGCCCTGCAATTTACATATAGCAGAGGCAAGGAAAAGATATGGTG
CACCTCATAATGGGGTTTAGGAGGTTGCCCACAAATAGATGATGCATGCCATCCATCGCT
AGCACTGCGAGTACTAAGCCCTTACACAGTAGCATCTTTGTCTTGTGTCCCAT
