Contig Data
morexGenes
Links



Map Locations of contig_79282 (5103 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_79282

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78233 3 4088 bp AK365212 Available Available None
MLOC_78234 1 1814 bp MLOC_78234.1 Available Available None





CDS Structure of MLOC_78233






CDS Structure of MLOC_78234






Contig Sequence (5103 bp)

>contig_79282 5103 assembly3_WGSMorex_rbca.fasta
GAAGTAAATGCACTTGCTCAACTGATGACATGGAAGACTGCTGTTGCGGCGGTACCATAT
GGTGGAGCAAAGGGGGGAATAGGCTGCTCTCCTGGTGATTTAAGCAGGAGTGAGTTGGAG
CGTCTGACGCGTGTATTTACTCAGAAAATTCATGACCTTATCGGAACCCATACCGATATT
CCAGCTCCAGACATGGGAACTAATTCACAGGTATGCTATTATGCAATTTCAGTGCCTTTT
CTATAGTTCGCTGCCTTCCTCTGTTCTGCTACTAACTCTATCTGAAACAATTTTTCTCCC
ATCTTCCATACAGACCATGGCATGGATCTTTGACGAGTACTCAAAATTCCATGGTCACTC
CCCAGCTGTTGTCACAGGGAAGCCCATAGTAAGTATTACCATTATAACAGAAAATTATCT
GCTGCATATGAACCGTTTACACATTATTGTTATTATGATTATAATGTGGGCCTATTTGTT
AGGATCTTGGTGGATCATTAGGTAGGGATGCTGCCACTGGGCGGGGTGTAATGTATGCTA
CTGAGGCTCTCCTGGCTGAATACGGAAAGTCTATTTCTGGATCAACCTTTGTTATTCAGG
TGAGTTGTAATAAATCACTGAGTTGTCGAATGGTAAATGGATAGTAGCAAGTGCCATGGT
AAAAAACCAAAATAAGTCTTTTCAAACGTAGTGCTACTGTTCATAGCCATCAAAATCCAG
AACTGTGCTTATATTCTATGAAATCTTGCAGGGATTCGGTAATGTTGGTTCATGGGCTGC
ACAACTCATCCATGAGAAAGGTGGTAAGGTAATTGCACTTGGAGATGTATCAGGCACAAT
CAGAAACAAAGCAGGGATAGACGTACCTGCTCTGATGAAGCACAGAAATGAGGGTGGTCA
GTTGAAAGACTTTCATGGTGCGGAAGTCATGGATTCCTCAGAGTTGCTGGTGCATGAATG
CGATGTCCTCCTCCCATGCGCCTTAGGTGGAGTTCTTAACAAGTAAGTCGCTTTAAATGT
GGCCTAAATCATTTTTACTAGATTTCACCGTACGTCATGGTTTTGCCCCTTTGCTGTTAC
ATGTTTGTTAGCGTTTTCTTCTACTAGTTTATTGTGAATAGCAAACATAATTGAGATTTG
AATACTGTGATATACCGACTTAACAAATTCTGTAGATAAGTTGATGCACTTTTATTCAAT
CTCTGTACCTGTTGAGCAACCTATTTTCTGATTGCTTCCTAGACATATAGTTTAGACTAA
GTAACTGATGATTTGCTTTCATTATCTGAAGAGATAATGCACCTGATGTGAAGGCCAAAT
TTATAATCGAAGCTGCTAATCATCCAACTGATCCAGAAGCTGATGAGGTAAGAGTATAGA
CCACCAAATAATTTACGATAATTTTTCATTCTTGAGAAATATAAAAAATACAAACACTTT
TTAGTTCTGTTTCCTGGATGTCTCACTTTTGTTGCATGTGATGTAGATCCTTACCAAGAA
GGGGGTGGTCGTGTTACCTGATATCTATGCTAATGCTGGTGGTGTGATCGTTAGTTATTT
TGAGTGGGTTCAGGTAATTGAGTATACGATGACGGCTTTTACCAACCTGTTTGCTTCAGC
CGGCAGTTTCCTTATGCTTTTTTTGATGATGCAGAACATTCAAGGCTTCATGTGGGAAGA
AGAAAAGGTGAACATGGAGCTCCACAAGTATATGAACAGCGCATTCCAGCACATCAAGGC
CATGTGCAAGTCTCAAGATTGCAGCCTTAGGATGGGAGCATTCACCTTGGGAGTGAACCG
GGTTGCACGCGCCACCATCTTGAGGGGCTGGGAGGCATGATGAGTTCCATATTCCTCATC
CAATAATCCATGTCCCAACACCGTGGTGGATGACAGTTCTTATATCCACCATCATTGGTT
TGGTAAATTCATCATAAGTTGCCGGCATGGGAGGAGTCCAGTTGAAATAATTTTCGGTGT
ACATGACAGATGATGGGTTTGGTCTTTATGTTAGCTAATTATCTGCCCTGGGTTGCCAAG
TATGGCGATCCAGTTCTGTGTGATTGTAAACCTTCAGAGTTGTTGAATGTTTACCAAATG
TTTCTGTGATTTAATATCAAAAGGGTTATTTTGGCCTCATTGGTTTCAATAATTTTGGTC
TCAGATTTGATGGCCCCAAATGTAAGAGATTATTTTCGCAAGATTCATGCAATGGAGAGT
TTCAGCAACTTATGGCAGACAAATATCGAAGAACCGATTGTTAACCCAGATGAACTGCAC
CCGTTTTTGTTTTCACATGAACCGACGAGATTCATACAAATTCAATCTCATGGATACCCC
TAAGGGACCTCCTTCGATGGAGGGTGGTATTTATTCAGACTTGAACTAAACTGGAGCTTC
GAAGAGAAATATTTCTAACTAGTTCAAATAACCCCTAAAACTGCTAAAGTTCAACAATAA
CAATAAAAAAACTAAAACTGCCGATTATGGATAGAACACAAAAGCTATCGTCATGTGCAC
TGCATTTAGGAACCCAAGAGGTGTTCTTCCAATTATGAACGACGCTTCATGAGCTGCCAT
GCCCGGTTTCAGAACTACTTCTCCTTTGTTGCCTCCGGCACCTGGGCAGGCAGTGCGAGC
ACACACAAGTTCGGATTATTTGGTACCTCGTCATAAAAGTTCAGCAGAAACTGTTTGCGA
GGCTTGCGGCGCGGCTTGACCGGCACAGATCGAGCCTCGCTGGGTGTAAGATCGCCGGCC
GCGGCCATCAATGTCGGTTTGCGCAACCAGTCATGGCCCTTGGGTGGAGCAGATGCAGCG
TTGCCAGCGGCCTTCTTGTCTGCAATAGATGTTGGGGCAGAGCCGCAGGTGGACTTTGCC
GGCTCTGATCTGCAGGTCCGACGACTGCGCTTGTGCTTCACAAATGGAGCTTGGGCGTCA
TCCTCCTTGCCGGGGACTTGCGCTGGAGCAGAGTTTTCGTCAGCTGCCACAAGGGGTGGT
TTGCAGGGCTGGGTGCTGCACTCTGGTGTACTGAATGAAGCAGGTTCCATGGCCAAGTGC
GGCCGCTTGGCTGCTGGAGCCTCGCTGCCATCTTCCTCCGTGACTAATGCTGCACCAGAG
CCGTCGTTGACAATCACAATTGCCAGCTCGAAAGGTTCCCCATGGTTCTTATCCGTGGCG
GATGGAGCCTCAGTGCTGTCTTTCTTGTCCATGACGAGCTCTTCGCCAGAGACGTCGGCC
GCCCCTACCTCCGTCAGAATGCGAGACCGGCCACGGCGTTTGGGCATCGTGGATGATGAC
CCGCTCACAAGCTTCTTGCGAGAAGCCGGCTTCGGCTGGGAGCCATCCTTCCGAGGCCGA
CCGCGGGCGCGCTTGTCCCCTGTGGACGGAGACCCAGCGGTCACCGCCGCCGGCGAGCCA
TACTTCCTAGGCCGACCGGGACCGCGCTTGGGGCCTGTCGTCGGAGGCCCAGCACTCACC
GCCGTTGCAGCGGCCTGCCAAGCATCTCTCCTAGGCCGTCCGCGGCCGCGCTTGGCCAGC
ACCAGCGAGTCATCCTTCTTAGGCCGACCGCGGGCGCGCTTGGGCTGTATCGGCGCAGCC
GTCGCCGACGCCGGGACCTCGGTGAGTGCGAGCACGGACTCGGGCTCGTCGTCGGAGCAG
CACGAGTACCGGCCAGACGCGGCGCAGACGAAGAGGCCCTCGGCGACGTGCTTGGCGAGG
TAGTAGCGGAGGAAGCTGTCGTGCGCGGCGGGGACGCCGGGGTACCTGCCGCGGATGAAG
TCCGAGATGGCGGACTCCGCCGAGCCCCCTTCCTCGCCCAGCGCCTCGATCGCCTCTTCG
ATCATCTGCAACCAACAACCAGACGAGGCCGCAAGACGTCAAACCGGCGGTCGCGGCCCA
TCCAAACCCCATTGCCATTAATTTCCCTTACCAAGCGCAAGCTAATCTGGATTGAGCGCA
AGCGATTTCTCTTGAAATCGGATGCGATGCTTGATTTTTTTTCTTTCCGAATCAACACGG
AGCATCGCTGGCGACGATGCTCAATTAGTAAGTAATTTCCTATTTGATTCGGGTGGGTGG
GGATTAAAAGAGCAAATCCGACTGTTCTCCCGGTGGAGGGAGAGAGAGAGAATGGACCGA
ATAAGCGGGGAGGAGTAAGTAGGCGATTAATCCGGCGGGGAGGAGTGATTACCCATGAAT
ACGGTGGGTGATCCGGCGTGGGATCCCGGCGCTTGGGCGCGGCGGCGGCGGCAGCCGACG
AGGACGGGTCCCCCAGCGTCGCTTGCCCCGCCGCGACGGCCAGCATTGCGCGGCGATGGG
GCGGGCGGATTGGTTGGAGGGAGGGGGCGGAAAGGGGAGGGCGCAAATCTAGAAGAGAAG
CAGGTTTAAGGAGGGGGAGAAGGAAGGAAGTGGAGCAACGCGTCTGCTGTTTCTGGGCTG
CGTGAAAAGGAAAGCCCGACCCTGTTCGGACCATACTGCCCCTGTTGTAAAGCATTACAC
CTGAACCTTTCAAATAACACCTCATACATTCCTAGACGTGTCCGATCAGTGATCGGAGAG
GACAGAAGGAAAAAAAAAATATCCAACCGGATCCCTCAGAGCAACTTCAACGCGCCGATC
CAAATGAACGATTCTTTTGTGCGCTTTTTGTCCGTTTGGGTCGATCGTCCGCTCGACGTT
CGCCCTTTTTAAGATTTGGGTCAGCAGGACGCCCTACGCCCGACCGATTTTATGTCCGCG
CACACATTTGAAAACAGTTCATGTCGGCACCATGTCAACGACCGTCATACAATGTCAGCT
TCAGAAAACAGTTCAGGCGCACTTGTCAGTGGCCGGCACACATACCTGCACAAAAAAGGG
CGGAAGTTCGACCACGCCATCACGGTCGTGGTCATGCCAGCACACTTGTCGGCATACAAA
AAAATATGACGCTCGTCGACATAGAACGCTCGTCATCGAACTTGAACATGTCAGTCTGCA
TCTTCTCGAACCACGACCTCTTCCTTGGCGACACGGTGTTGAGATCCANCTTCATGATCT
CCACCCCCGTCATCATGCTAGGGAGAGCCACTTCTTTCGCCTTGGTCTTGGCACTGGCGG
CCT