Contig Data
morexGenes
Links



Map Locations of contig_79031 (4992 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_79031

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78180 3 2683 bp AK375886 Available Available None





CDS Structure of MLOC_78180






Contig Sequence (4992 bp)

>contig_79031 4992 assembly3_WGSMorex_rbca.fasta
GCGGGGAGGAGCGGAGCGGGGCTCATAACATGGAGTGAATCTTGTTGAAGTATTCTCGCC
ATATATGCTTGAACTCCTTGTCCTTCACCACAAGTCAATCTGCTATGTCCTTAAGCATTT
GACTTGGTTCACATCCTTCGTCTTCCTCTCTCAGATCGTGGCCATCTTATCGATGTCCCT
TTCGCCTTCCTTCGTGTTTAAACGCTCGTAGAGGTCCTCATACGCTTGATCCCTGCTTCA
CTCACAACTTGCTTTGCGGTCTTCTTTGCCACCTTGTACTTATCTATGTTGTCTGCACTC
CTATCCAGGTGTAGGCATCTGAAATAGTCTTTCTTCTCCTTAATAGCCTTATAGAGATAT
TGTTGCATCACCTCCTTCCTCTCAAGGGCCCTCCTTAATAACCCTCTCCTTGAAAGCCCG
ACCTGCCTCTCCCTTGAGCTTCCACCACTTTGTTCAAGCAACTTTGGCGCGCTTATCCCG
ATGGGCATGAATTCGAAAGCTGAAGTCAGCCACCACAAGCTTATGTTGAGGGACAACACT
CTCTCCAGGTTTCACCTTACAACCAAGGAAAGCACGCATGTCTTTTCTTCTTGAGAGGGT
GAGGTCAATCCAGCTAAAGTGTTGACCACCACTAAAAGTCACTAGATGGGATTCTCTCTT
TAAAGAGGGTGTTAACTACGATCATGTCGTAGGCTAAAGCAAAGCTTAAGAAATCCTCTC
CTTATTGATTCCAGTTGCCATAGCCAAAGCCCCCATGGTACGACCAAGTCAATAATTGGC
ACTAATAATCCAGTAGTTGTTCACGTCGTCAGAGATGTTTCTGTTATATCAAAACAGACC
GATGATGTATATGTGCTAATGTATGTTGGCGTTGATAAGAAATACTGTGAGAAGATTGCA
AATTTAGTTGAAGTTACATGCATGCATATTATGGCATTGACAGAGATGCACTTGCATAAG
AAAGAGGAAAATAAGATGCTGAATGTGTATGCATTACGTGGGAAGAGGTAGTACATGTGT
GCGCATGGAAGGAAGGGTTCATACACTAGCACGTTGGTTCAAGCTGTGCATCAATCTGGT
CGTTTGTTTTGCTTGCCGCGTCCAGAACAAGTCCAAGTTGTACATGTACAGGAGATTTGT
CTCTTTGAGATTGATCACAAAATCCTAGTCTACTAGTTCTGAAGTTAATAACCCCATGCA
CCCTTCAAAACTTGTGTTAGATGTACCCACGTGGCCATTGAGGTCTCCTCCTATGAAGAG
CCTCTCGCCAATAGGTACACTCCTAACCATGTCTCCAGGCCTTCCCAGAACTCCCGCTTG
GTGCTCTCATTGCGGCCTACTTGCGGGGCATATGCGCTGATAACATTGAGAACCAAGTCC
TCAACAACCTGCTTAGACCAGGATAATCCAGTCCCCTTGCCTCTTGAAGTCTACCACTCC
ATACTTGAGGCTCTTGGCAAAAAAGACTTGGCAAAAAAAACTAATGAAACGCATTTAAAG
TAGCATGAATGCACATGACAGAATATGCCACATATTGCTTCCATTCCATCTGGACGGCTT
CTCATGAGCAAGCACTTCATACAATAGGAAAGAGTGAGTACATCGTGTTTTGGAGAGCCT
TAACTTTAAAGACACAGTAGGACTATTGGATGCTCTGGCGCTGATAGTGATTGATCAATG
ATTGCTATCAAAAAATGTGGAAATAAAGCTGAAGCAATAAGTAGGACTACTGGCCATAGC
TAAAAAAACATGGCTAGGCTTTAGGCGATAGCAAAACACACCTACCGCTTAATGTGCACA
TATTTGCGCTGAAGCATGTGCTTTGGTTAGAAAAGCGCATGGCAGTGGCAAAATGCACAA
TTAACGCCCAATGTTTTTTAAAAAAAAACAGGAAAATGAACAGCGGCTCTGCCAATAGTA
TTTAACCGGTAATAGACACATAGAGAAACAGTCAATGTATATATGTAAATAGATGAAGAA
GAATGTGTTCTAGAAGAGTACTGTCCTCATGCAGAACAGAAGGGGTAGTAGTACTCTGTA
AAATAACAATGTCACTTTCGGTTCTATAAATGTAGCACTAAATCTGAAAGGAACAAAACA
TACTCCAGAAAACTATTGATTTGCCTGTAAAAAGTATTAATGTGTATTGAAAGTTGCAAA
ATGAGTATTCTGACCTTTCTCAAAGCTTGGAATGGAAATTTGAGCCATTTCATCTTCAGT
TGGCGGAATGGGTGAAAGAATTGGTTGTTTTTTGTTCTCGCTTCCTTCTGGAGAATTAGG
AGATTCACTTTTACGTAACTCATCGGTTTTATCCATCCCGTCCTGGATATCAGCAGTACA
TGAATGAGTGATAAACAGATCGAGTTGCTCTGTTACATGAGTATAGAGAAAATAAATTTA
CAATGGCTGGGGAATGATTTATAGATTTGGAAAGCCTACCAATGGCTCAGACCCCGGATC
AGAAGCATAGGAACTTGATCTTGACCTGTTCACACTTTTTCGATATTTGGGGCTGTATGT
GTCATCATGTAGCATTTTACTTCTATCGCGGTAGCCATTTACATTAGTTGCAAAAGTAGG
ACTCACAAAGTCATCTCGCATGTCTCTGAATCTGTCTGCCAATGGACTGGCAAACTTCTC
TCCAAGTTTACCATTTATCTGGGGACTTGCCTCGTTGTCCCATGGATACATTTTCGGTTC
AGGTGATGGAATAGCAGCACCAGCTGGTGGTGAGCTAAAATTATTTCCTGCTGCTTTATG
TGCCTGGGGGCTTCCGTCTGAAGCTTTGCTCAAATTAGCTTTCTCCGTGCGGTGCAGCAA
TGAAGAATAACTTTCTTTGCTCTTTGATGAAATATTCTGAGAAGAGAGCTTATCTTCACC
TACATCCAGTGTCGCGGGCAGCAACTTTTCTGAAAACTGCATCTTCTGAGGCCCAACTTT
AGCCATTCCATTCAGCCGTTTCTCCCTTGTAGGGCTTCTAGAACAGCTCTCAGCAGTTTT
CCCAGTTCGTGACAAAGAAGAAAAGGAGGTGGTTTTCTCTCCTTTATTCTCTGATGGTAC
ATTTCTAGAAGATGGCTGTCCTCCTCTATCATCCGGTGTGATCTTGTCAGAACAATGGAC
CTTCTTAAGCTCTACTTTAGCCTTCCGATTTGAGCTTCTAAGATTTCTCAAGCAGACAGA
GTTACCAATTGCAGATTTCCCCGCAGTTTTGGGTGTGCATTTCTCATCAAAAATAAACAC
ATTGTCCAGTGTTTTCTGTTTGGGTGCAGAACATGAAGTAGGCAATGGTTTCTTTGCACT
CTGGCTCTTATCCTGCTTCTTGGAGGCTGCTGGTGCGTTCTTGCGACCCAAGGTGCGAGT
AACAGACCTTATTTCAACTACTTGTGGAGTATCAGAATCTGACTCAATTGGATCAGAGGA
TGGTTTACTCTTTGCATAGGTAGCTGTTTGACAGTTCAGCAGATCAGGTGTCTTGATATT
ATCAGGAAAAGGTGATGTGTAGACCTTCTTGTTCCCTGAAGATGGTCCATTGGCGGTTAA
ACTTTTAGGTTGGTTAGGTGTCTCAGTGTCTTCGGGGTTTGGTGAAGCAACAGTCTGCTT
GGTTTGTGATGTACCAAGGATCTCCCACAGCTTCATCCTGAGAACTTCGCTGTTGGGTTT
GGTTTTATCTGCAGATTCCACTTGGCGCTTTCCTTGTGAATTCACTAAGGGTGTCTTTTG
CAGTTGGTCAAGCTGGCTGTCTTGTTCTTTTCTTGTTCCAAAGGAAAAGGTTCCGGTTTG
CTCAGGTGAATGGTCATCAGGTTGTGATAGAGAAACCTTAACAGGGGCGGCTTCTGGTGC
CTCTGTAGCAGATCCGCCATGGTTTGCAGCTTCTTGTGAGACCCGGAGTGAAGCATTATA
ACCTCTCGGGGGTCTAGATCTTCCATCAGTTCCCTGAGACAGGTTCCTCTCAAATGCAGG
GGCAGTAGCAGCATCTCTGCTTCTCGATACAGAACCTGGCCTTGGAATTGGGATGCCAAT
TGATACCTTAGGAAATTTACCAGATGGATACTGGTTGCTGGCCAAAGTCCAGTAATCACT
TGATGTAGCCTAGACAAATCATAATGCATGAGTTGTTAAATACTGCTATGAAAGAACAGC
TAAAGCTGAAACAGGTGGCACATCCTGCAATTTAGCACAGGAAGTTGTTACTCACCTTCT
GGATATTCGGCTTTTCAATTTCCGTCATTGCAGCTTCTGGGATAATAACAGACCAAAATA
ACTAAAGAAAGGAGAACAAGAGAATTATGTTAGGTTCCACCAATGTTAGAGCATCTTTTA
GGATCAAATTAAGCTCCGCAGATGTATAATAAATAGTTAAATACAATGAGACTATAAGCC
ATGCCTGAGACCAAATTTAGAAATGAACGGTAACAAAGGATACATAACTGTGCAAAATAT
TATCGTCAAGTGTAACTTATGCCAGGTCTGAATTGCTATGCGGTACTATAGTGAGTCGAA
TTGAACAGGCTGCTGAGAGTAAGAGCATACCAACCAGATCGACTTAGCCTACTAGGAAAA
ATACTAGGACCAGCCCCTTCTAAGCACATTGAATTAACAGAAGACTAAAAGTAACAGGTG
CAATTGTGTCATAGAGCACAGGACTAAACGTGGTCTCGGCATTCAGAGGTCGTCTTCCAC
AAGCAATGCAGCTTAGCAACCACTAGGAACCGAGCAAACCACAGCAAAATCAGACGTGAG
CAAAAAAAATGCAACAACGAGCGTGCAACCGAGGCGAAATTAGAACGTATAGATTAGGAA
ATCCACAGGTGGACATAATTCCAACCCATAAACCCTAAAACCTTGCGTGCGGCGGCGAGG
TATACCGGGGTAGCAGGCCGCTGGCGAGCTAGACCAGAGGAGGCGGCCGGCGGCAGGGAA
GACCTAGGCTTCGGTTGCCAGAAGAGAGCGAGAGAGGGTGAGAGGTGAAGGGTGGCGCTG
TGGGGGGGGTGG