Contig Data
morexGenes
Links



Map Locations of contig_7898 (4615 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7898

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78170 2 879 bp MLOC_78170.1 Available Available LOC_Os10g35644.1, FRAME:-1, EVALUE:2e-80, 13110.m03205 protein expressed protein





CDS Structure of MLOC_78170






Contig Sequence (4615 bp)

>contig_7898 4615 assembly3_WGSMorex_rbca.fasta
CCAGTAAAACAGACCGTCCAGACCTCGAAATCATTCCAGTAAAGTAGATCATACAAATCT
CTGCATTTAACATAGAACAAGTTATAAATTACCGTTGAGCGGCAGACTGATGTTGCACAA
ATGCCTTGCAGACGAGCCCGAGGCCTCCGAGATCTCGATGCCGCGGTAATTCTCTTGCTT
GCAGAACCCTGAACCCATCCCGAGCATGTTGAGGAAGCTGTTTGGTTTATTTCTGGTCGC
AGAAGCTTCAGTCTGTCCTCCATGTGAGCAAAGTTCATGTTACAAATCTCTCAAACATTT
GTGGAAGCTAATCGCAGAAGTGCTCTGATCTGAGTACCTGTGAGAATGCCGCGACATGGC
TTGGAAGCCCCACTTCCTGCATTAACGACAGTGACATTGATTAGGAAAAGTAGATGGACA
CTGGCAGAGAAGAGTTGGCCTGAGTCGGGAACGAATCATAGATGGGCAGTTTGGCACCTT
GCGTCCATGCCGGCAGGCTTCAGCGCTGTTTACTAGCACCCTGGCAGCCCACCTGTTAAA
TATGCGCAGACAGCAAATCAGCAGAGTGCACAAGGATAGATAGCATGACTAATTAAGCAA
GTTATCTTAGGCATCGTCGGGTAAGGCCGGGGGTTAACCCAAATGGATTACAGATAGGCA
ACACGGCTGTCGATGCCAGAGGGAGCAAGCACAGCGAGCGGATGAGATAATTAATGTGCC
GCTGATGATTTAACACAAGTGGAGCTCAAGCACAGTGAACTGATCAAGTGGGCGTTGTTT
ACTGAAGAGGTCAAGTAGAGTGAGCTGAGGTGATCAAGTGGGCGTTGTTCCTTGTTTTGT
AATGCAAGTTGTGCCAGTTGATCGATTCCATTGGCATTCCCCAAGCAGGCAATCACTCAC
TAGTGGAATTAGAAGGCGATTAAACTAGGACAAAAGAAGGTGATGGGCAAGAGCAACTCA
CGCGCAGGAAGTCGGCGGGTTCCACACAATGCCGGCGATCACCACGAGCTGCGGAGCATG
AAGGAAAAGTTATGCTCGTCAGAGAACCTGTGGAGGATGGAAACCGGGAGATGGATGGAA
TGGTGCGGCAGGGAGGGGACGACGACGGTGACCTCGTCGAACTGGCCGGCGGGGCTGTCG
TGGTAGCGCGCGAGGAACATGCCGCCGAGCGTGTAGCCGAAGGCCTCCACCAGGCGCAGG
TCCTTGGGCACGAACGCCCGCGCCGTCGCCGCCTTCACCAAATGCAGCTGGTACAATGCG
CTGCAACCAACACGCACACCAAAAGAGTCAGTCGGTCACCGTCGTCCATGGTGAACGGGG
GAGAAAAGCAGAGGAGGCACTTGCCTGCCCTTGAACACCCATGGCGGCCCGTGCCTGTAC
CCGGCGGCGGGCCTGTCGTCCTCGGCCTCCATGGACGGGGATCAGCTTGGGTTTTCTATG
TGGGGGAAGGAAGCAAGGAGGAAGGGAGCTGGCGAGGAATGATGGAGAGCAAGTGATGCT
GCAGGTGCAGGGGATCTCGCTCCAGCCTTATCCGGTGTACAGAGGGCGCCGGTTTAGAGG
CCCGGGGCGGGGGCGACGGTGATGTCATATCGCTTCACCGTGGAGATCCATGAGGGGGCC
CATGCCCATCGACTCTGAATGATACAGTACCGGAGGTGTGTGTGTGTGTGGCTGGCGGCC
GTTTGCTGCTGCGGTTCCCGTGGCTCGAGTGAGAGTGACAGTGACATGGGGCAAAGGGAC
GGTACTGTGTTCGTTGTGTGGCTGCTTGCAATGGTAAGCTGCGTCACGCGTGCAGGTGCA
AAGTCACCGGCACCGGCACCGGCACCGGCATCGGCTCGGGGGGTGTATCGTTGGACGAGC
ACTTTGACAAGGATATTGAATGCTCTGCGGATAACAACGATCCATGTGCACTAGATTTTC
AGAGGATGCCTGACAAATTGCTTGGATAATACTCCGGGGTGTTTGGTCAAAGAAATGACA
TGGATACCACTGTGGCATTTTTCGCAATTTCTTGCTACTCTTCTATCAACCTTGCTCGAC
CCGACCCGACGAGCTTGATCTATTTCGTCCTCGGTCGTTCGTTGCTGCTCCCAGTTGGTC
AAACGGACGAGATGCGGACGCGGAAGGGAGCGGCGCCCGGCCACAGCACACCAAGCCTGG
CCAGGCCATCCACATGTGGGAGTGAGAGTGAAAGTGAAAGTACAAATTTGCACCCCAAGT
GTTGTTGGGGTTAATAATGCTAACACCTTAGTGTTCTGACCACGTGATTGAGTCTATACA
TGGTGCGATGACATATTAAACGAGAAGCATGGATGGTTGGAAGACCCCCATTTTAAAAGA
TAAAGTGACGGTATCTTGGTGACTTTTACAGTTCATTTTATCGTCAGAAAAGCCATACTA
GTAAGAGAAAAGCATCTTGAAGCTGAGTCGTGAATCAATTTCATGCACACACATATACTC
CTCCCGTTTTTAAATATATGTTTTTTAAAATTTTATTAAAAGACTACATAGGAAATAAAT
AAATGAATGTACATCCTAAAATATGTCTACATACATTTGTATGTATTCTTTTAGTGAAAC
CTTTAAAAAGACTTATATTTAGGAATGGAGGGAGTATGCACCAACAATTCTCACCAAAAT
CAGGAGATAATGCCCCTTCCAAGTCCTTGCTATGGGCTCTGTTCTGCGTAGGTTGGAACT
TCCGAGGCCGGTGTCTTCGAGCTACATCCGCATAGCTTTCGGGCGTCCAAAGATTTACAG
CTTCGAGTTGCAACTTTATGAAAATCTCGAAACCCATCCAAAACTTCTATGGTTTTCAAA
GAGTTGCATCTTGAAACTCTCGGTTTAATTTCAAACTTGGTCGAAAATAGCTAGAAATCT
TCAAGGTCACGTTGGAACCATCTAGGAGTTGCACTTGTACAACCGAAAACACATTCACTA
ACATGCTCGAAAATTGCCTGGAATCTTGATGGTCCAAAACTTTCGGGCCATGCAAAATCG
GTGGATAACAGTTGGATTTTCGAAGGGGGGGGGCTATATAAAGCCCCATTCTTCTCCACA
AACAAGAGGACGACTTCATTATCTCTCCTCTATTAATACAATGTCGGTCCAATGGGACCT
AGGGTACCACGGTCCATCTGCCTCTAGCCTTGAGGGCGACCCGCGGGCCGGCCCAAGTGA
GAAAGCCCTCCCCGACCACTCCAGGGGAAGCTGCCTCGCGAGGGGTGTGTCTCACTAGGC
CGCCTCGCGAGGCCCTTCCTGCTAGGCGACCTCACGAGGCCTGACGCGCAGCATCGATCG
CGGGGCCTTGTGCCCATCACGTGGGTAGCGCACCCGCTCGGAGAAAGATAACAGAGGTCG
TGCGAGCAAGCACGGCCAGGTACAATGTCTTCTAGTGGTTAAGGGGCAACGCTTGCTACC
CCTCCGAGAGGGAGGTTGCAAAGCTTGCCGTTTTTGTGATAGAGGATCAGAAAGCACCGG
GGTTGCAGGATGGAGGCCATTTCCGAGCCCACATACGCGTCACGAAGACTATTTTACGAG
GCGAAGACTACCTTTAGTCAAGATAGGCCTCGCACTTGACCCCCTTCGAATTGCCGCCCT
GTGGCTACCCTTTCCCATCGATATTTTCAGGGAAGAGGACCAATGCACTACAAAGGGGGA
AGGGCCACACCCATGTAGGGGGATGGACCATTCTCTCCCCCAACTCAAGTTTACTCAAGC
CTCAAGCACCTTCTTTTCGAAGGCAACCAAATGACAAGTAGGAGTAGGATTTTATGTCGT
CACGGACCCGAACCTCGGTAGCTCGTGTGTCCCCATCGTTCCAGGTGAGGAGGAGTGAGT
TTGTTGTAAACCTTGTTGTGTTTGTAATCGTGTGGCAGGTCGCAAGCCAAGCGCCGAGTG
TTCGAACCTTGTTCTTGGAGAAGTTCTTGGACACAGATCTCAGACTCGACATTTGGCGCG
CCAGGTCAGGGGACTTGCCTTCTTCGAGCCCTCGACCTCGACATCAGCATCGACATGGAT
GAAGCCGCCGCCCGCGAGGAGTGTGTTGAGCGCCGAGCTGCCGCCAGGGCACCCGCGGTG
CCACGGGGCGGCGCCCCCGGGCCGCCATGGAGCCTGTTGGGGAGCGCATGGCCTCCTTCA
TCCACCTATCCGTGAACGAGCAGGCGCGTGGCCGCTCCACCACTGTCTCCTTGCTCGCGC
GCCGTGCTGCTCATGGCTCAAGAGTTTCTATGCTACCGCCCTGCCAACGACGGCTATGGA
GCCTCGCTCTAGCGCATCACCGAGCACGTCGATGTCGCCCGCACCGGTGTGAGTCACGAC
GGTTAGGCGCCCTCTTGCTCCATGCCCCCTTCGTCATCGTGCACCGACCAAGGCGAGCGT
GATGCTCCCCCTCCTCCTCCTCCAATGCGCGCGGCGGAACCGCCCCACGGGTCGTTGGCA
CCGGTAGGTGACGGCGACCGCTGCTAGATCGTCCACCGAGCACCCCAAGAGGCGTGCATG
GTCCACGAGAAGGCGCACAGATGCCGGGATTGCATTCTCCAGGACGTCGTGCAGCAGGGC
GCCAGAATCGCTTGACCCTCAATGGAGGCGTCCCCTGTTGGGGAACGTCGCATGG