morexGenes - Barley RNA-seq Database

Contig contig_78972

Source Contig contig_78972

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_78972 (2116 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_78972

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_78167	1	714 bp	MLOC_78167.1	Available	Available	None

CDS Structure of MLOC_78167

Contig Sequence (2116 bp)

>contig_78972 2116 assembly3_WGSMorex_rbca.fasta
GTATCCGGCAGACGCGCCCTCCGGAGCCCCGGCGTCCGCGCGCGCGGGGTTGGCGGGCGC
CTGGCGGTCCACGAGCAGCGAGAAGAGGAAGCGGTTGACGGTGCCGTCCCGGCGCTGCGT
GGCGTCGACGGCGGCCTCGAGCGCGCGCAGCTGGAGCCGCACCGCCCACGGCATCGCCCC
CACGCGCGCCCGGAGCTCCTTGCGAGCGACGTCGCCGGACATTTTTCTCTGTTGTGCTCG
GTGTAGGCGTGTGGCTGGCTCGGCCTCTGCCTTTATCGATTTCTCTGCTGGAGTTTGTGC
CACTACAGTGACAAAGACAACGTCCGTTTCATGCAGCGACTGGCAGGTCCCAGATAGCCG
AGCACTGCAGTGGCATTGCCTCTGCTACTACTCCTAGCTGCTATCCTGGCTCGCTCGGTC
CTCCTTATCTCCTCTCAGATTTTCCAGTCGGCGGTGTCAGCGACAAGCAGGTCGCAGATG
GCCAGGCACTACGGGAGCATGTTCGGATGTAGAATCAATGGCGTGATCCGCCGAACGCGA
CGACATGTGCGGATGCATGATTGGTGAAGCTGCCATCGCCATGGTCCCGTGGAGAAGACC
ACGTGTGCGGGCAAAGCTAGCAATCCACGAGTGTAAGAGCATCTACAACTCAACCACTCA
AACTCTTTTCAAAAGACGATCTGCCCCGGTCACTCACTCATATCTACTCAAACGGCCGGT
CCGACACGACCCGACCCGGCTGTAAACGGGCCCGACACGGCACGGTCCGCCAACCAAACA
CGAATATTAGTCGGGTCATACCGAGTCGGTCCACGTGCACAGTCTCGAGACCTACACACG
ATATGAGAGCTATATGGACCGGCCCGTCGGCAAGTCAGGCCCGATTTTAGATCGATTTTG
GCCTGTCATGCTATTTTATATGTTATATATAGTATAAATACAAAATAAAAAATGTAAACA
GGCCGTGTCGTGTCGGCCCGCATGCCCAACCTTCAGGCCGAGACATGGCCCGAGGCGGGT
TGCGTGCCTGGCATGACCCGAGGCAGGCTGCGTACCTGGCACGGCCCGTTTAGGTAGTGT
CGTGCGTGGCCATGGTGGGTCGTGTCGTGCCGGCCCGCATGCTCAACCTTCAGGCCAAGG
TACGACGCGAGGCGGGCTGCGTGCCTCGCACCACCCATTTAGGTTGTGCCGCGTCTGGCC
CATGGCGGGCCGTGCCGACGTGCTCGCGGGTTGGCCTGTTTAGCCCGGTCTGTTTGGCCA
GCTATACACTCACTCGTCACGAAAAAACGACCTAAACGGACCCCTCAAACCGACCTCAAA
CGTGTGGGTTGAGCTGATATGGGGCGGATATGGGGGAGCCTGGGCCCACCCGGGCACGCT
CGTCTGGCCCGCGCTGGCCCGCATCTATCCCACATATATTCGTCCCTATCCGCTCGCGAG
ACCAAACCCTAGCCACTCCCCTCCACTCCCATCCGCAACCTAAGCTCACCTCCCGCATGG
CGGGTAGCGGATCTGAGTCCTTCACCTCCAGATCCGTCGACCACGAGCTCGTCCCACGCG
GCCCCAAGGAGGAGATGGCATTCAAGATTGCGCTCCACCGCACCTGGGAGGCGGCCGCAC
GACAGCAGCGCTCGGACTGGCAATGTCGGGAATCTGTTGTGTCCGCACAACCGGTGCTTG
GATCCAATGTTGCTACGTGACCGGAGGTGGTGCGGTCCGTCTGGCGTGCGAACACCGTGG
CAGAAGCGTAACCCCTTAGTTGGCGCGTTGAGCACGAAACATAGCCATCCTCGGACGATG
TCATGGCGCGGCGTGCCCGCTGGGCGAGGCAGCAGGTATGGGAAGCGACAGAAGCCCTCG
CTATAGTGGATGCTGGAGAGGCGGAGTCACACTCTCCGACGCCCCGTAGGGTACACTAGT
GTGGGTGACGCAACCGCGTCGTGGTGGACGTCGGCTCCTCCCAGGAAGAATTCTTCATCG
ACCTCTTGTCACCTCGCACCGTCTGGGTTACGGGCTCCGACGAGGAAGAGTAGAGCATGG
GAGAGGGCGGGAGCTCGACTCCCGTGAGTCGGCTAATGTCCCATGTCCTACTCTACTATT
GGAATTATGCCCTAGA