| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_78796
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_78137 |
1 |
203 bp |
AK354432 |
Not available |
Available |
None |
CDS Structure of MLOC_78137
Contig Sequence (8062 bp)
>contig_78796 8062 assembly3_WGSMorex_rbca.fasta
ATGATGTACATCATGAAGGCTGGGTACCAATCGAGTGGACTCTTTGTTTAGTGTCGCTAG
GGAAAAGGCATTGTTCTGGTGCTTACCTCGGGTATGTAATATACCACGAGTCATGGATGA
CACAGAAGCTCATATGTCTTGTGGGTACAGCGCGCAACCTCCGTAGAGTGTAAAGCTATT
CGAATAGNNNNNTCCATGGTCAAGGATAGTTGGGTAGTCCTGCTTAAAATACATTAAGTT
GTTTTCGCATAAACCAAGTGTGCGTGTGTGAAAAAGGTGATGGTGTGAGAAAAATGATAC
TTGAGCTAACTCAGACGACTTGGTATGGGAAATGAACGTGGGACGTTCAATCCCTGCTTA
TGATGATAACTATAACTTGTTCATATGTATATCTGCGGCATGATTGATATTTTTAATTTA
GCATTAGGAAGGACATGACAAATTATTATGTCTGTGAACTCAACAAATTAGATATGTGCT
ATTTCAAGCTTGGATATATCAATGCATATGGAGTATTTCATAGCAGTTGAGATATCCAAA
ATTGTTTACCTTTGATTGCTTCGGTCCTTAGGGCAATCCGGAATTGCAGTGATAAGTGAT
CATTTGAGTTCCACTATTTGGTGACTGAGAGTAAAGAGCCTGACCACACAATAAGATAAA
ATAAAACACTTACTTCCACCATATTGACGGCTATAGCTGAAATGGTACCATACATTCAAA
CGATTATACCTGGAGTTACTGATCCCAAATCTTTGTCATTTAAAGTTGCTTTTGCACCAC
TGGCACATGTCCATGTTGGTATTCTCACATTCAATGATTCTGCAAAAAAATATGGAGGCT
AACTTTGCATGCCATGATATGAATTTCATGCCAACAAAACTCAAGAAGAAATACCTTTCC
AGATTTTCATGCCAAAGGAACTCTAGAATATTATTTTTCGCACCGATTTAGGCTTCACTC
TAAAAGATTTCGTCAGTTGCAGTCTAAAATATTATTTCTCCTTACTTATTGTTGTGTGTG
TTCCTTTCAGGAATCAAACAAGGAATAACGACGCGGCGGTGCAGGACGGACGGAGGGCTC
TGAACAGCGGGAAGTGGCCCCCAAGATAGAGGTGAGCAATGCAGGCTGTGGTTGGCCCTG
AATTTGCATGTTGGTTCGGTTATCTGATGCCCAATGGTTACATATGATGAGTTTAGTCTA
CATTATTCCTGTGCGTTTTGAATCCTCCACCGAAATAGAAAGACTAACCTGCCCGTACAG
TCCCCACCCAAATGCAAGAAGTGCTCCTGAATCTGCAAACAAGTGCTAGCTGTTAAAAAG
GTGTAGGGGAAATCTCGACTAAAATTTAAGGGGCCTGTGTTTTGATGAAGTAACGGGACA
GGAGCACTGCCCTTCTATCGAGACCAAACATGATTGGTACTGTCTATACATGGATACGAT
AAAATAAAAGGCGTTGTTCAGTTCTGCGACTCTCGGGTACTAAATTCCCGCGAATTCTGT
CTGCTGACAGACGAATGTAGCGGACATGGCAGATTGCTTTTCCAGCAGGTGGTTGTGGAC
AAACTGAAGAGAAGGAGGACATAAGGCATGAATCATAGTACTACATTTTCCCTCATCTCT
TGTGTAGAGCTTGGCATATGATACTCTAGATGGAAGCTTCCTATTGTTTTGTAAGACTAT
ATATATTTCTCATCTTTCAAAGACCCTGATGCATGTTGAAGTCTTGCAAGGATCTTTTAT
GTCAAAAGAGGGGTTCTGGTGTGTGTGTTCGTTCATACCTGAAACACCCTCTTTTCCTTT
CCTTGACTTTCCTTTCCTTACCTTTCCACCAGCAAGTTTTCGTTCATTTGTTGGCTTTTC
TGCTGTCAAAGGTGGTTACGCTCCTGTTCAGATTCAGCACATACTTTTGGACTTTGAATG
CACGGGTTGCTTGCTGACCATCAAGACGGAGGATTAGGATCAAAACTATTGGAGTATTAC
AGAATTGTCAAGTAGGGCATGGCAAGTCCAGTTTTGTTTAATCTCTCTTAATATAAAGAC
GGTAATCATGCAACTTTATCCGGACGGGAAGAAAGAAAAGAGCTCCAAGCCAGACCGGAT
GAGCGAGTAAGTGAGTAGGCATGCAGGGCGAGCATCGCTTTCGTGCCCGCATCAGCTCGT
TGTTTTCAAAGGGATTTGGTATTGGGCAGCTGAGCTAACCAGCAGGATAACTGAGGCATA
CGTGCGTGCGCGCACACGTAACGTCCACACGTGTGCGTGCGTGGCCACGGTGCCATGAAT
TAGTCAATCAGTCGAGCAAAGCAACCAGCTGATCAAGCTTCAAAGCGTTTTGTTTGTCTG
TCTGTCTGTGTGGCAGACAAGGGGAGGAACAAGGACATGATGGCTTCATGCTAGAGCCCA
TAGTGTCTCCTGCTCCCAAATCCTGGCAAATGGCAACCCCAGGCCCAGCTCATGTTGTAG
TATACCGCCAGGCTCCCAGCTGGTGCCATGATCTCTTCCTTACACGACTACATACACACA
CAGTGCAAATGTAGAAAGAGATGCACATGGCATGGCATGGCATTCTTTTTCAGCATCAGC
GTCATGCCAGGCTGAAAATCTAATTAAATTGATTTGCTTGGGGATAATCAGGTTGAAAAC
TTGTTTGCCAGTCCAAATTGGCCTTGGTTTCAAAATAGCAGGGGCAGGGACCTTCCCATC
AAAATCTTCCCACCACATTAAGATGTTCATGAATACATCCTGGGATATATTTCACAACAT
TAATGGTACATGCCAGTACAATAGAGATTCATATGTTTGGATTAGTAAGATTTTACTTGA
AATGAATAGTATAATAGTTCCTTAAATCAATTTTTTCCACCAAATGTAAGAAGGAAGAGT
AATCAGACATGCTATATGTAAGAAGGAATAGTAACGAGACAAGATAAATACTGCATATGC
ATTGTTTTTACCTTCAGCTGCTTAGCAACATCCTTGGCTGATGAACCAGAGACTTCAATC
CATGTCTTTGAGAAGAGAGCACATGCTGACAGCATGAAGACCACATAGAACAATGCATGG
AATGGATTCGCCAGAATATCACCCGTACTGCAGTTTCCATAAAAGGGTCAGTATAATTAA
CAGTATTTTCTAACATACCCCAGTTTCCATAAATAGGTAAGCATAATTAACAGTAATTTC
TGCACTAAGCAAGGACAAGAGATACATTATTCACCTTGAAGGTGTAGTTACATAATAAGC
AAGACCACCAACAAGGATAGGATGGCCAGAATATTCAGATTCTTTCCATATACCGACAAA
TAGATAACTATCAGAAAGACCAACACAGTAGCAAGTAAATTGGTCACATTTGGCATATTC
TGACGGTATAAAGCCTCTCGTAGGGCACGGACTTTGTCTGATCGAGTAATCAACAGATGG
AACAATGCAATGCTAAAGGAAAAAGAGGTATGTCTATGCCAATCACATGTCTGCATATAA
GGTATACAGTAATATTTCACAACTTATCCTACATTAATTATTATCAGTTGTTGAATATGA
GAGGACACCGAGGCGACAACCCACCATTACCCAACTGTCTGGTTTTTTCATACACGACCA
AACGGACACTACTAACAACACTGTTTCGTCTTCCGACGATGATGACAATCTGTCGACCCA
ACTCCGTATGATGGTTCCCATAGCCCGCAACCTCACGGCTTTTCGACCAGTGCAGCATGT
CGAAACCCCAAGTGGTATCGCCCTTACCCAATGACATATTTTTCGTTAGCAGTGTTACAT
TTCATAACCAAAGTGGTCCATAAAATGGTTCTTTAGGAAATCATTCTCGTGAAGCCAGCT
ACAATGATCATCATGCATCACTTGGAGGAACACGTAGCACCACTGAGCATGATACTGTTA
CATATATAGCACCAACGCTCAACACCTCACAAGTTGTTCCTCAACAACTTGCTTCAAGCG
CAGTCATTACATCAGACAAAAAATAGAAAAGGCAATACCAACATATAGCTCAGCGGGATC
AAATTAATAAGGGTGCTCTGAGTTGGTATGCACGAATGTCCGATGAGAGAAGAGCCGAAT
ACAACCATAAGCGTCGTGCATTATATAAAGAACGGAAGGCAGCATGAATGGATATAGTTA
ACCATGAGCAAGTGTCGCAAACATGTGCTTCCTCGCTTGGTATGCAACGTAAGCCTTTCA
GCAACATAAGCAACACATTTAATAATGGTACATTCGTAAACTTGTGGCCTACTGTGTTAA
TGTGTGTTCTATTTCCTCTTGTGTGCTACATATGTGCATGGCTGCAACATCAGCAAGTAC
AAACCATCAGATCGGAGATACAAATGTTGGGTGCAACGCGGCGACTCATAATCATGGGAA
TGAAAATCCCACGTGTTGCATACCGGGAGTTCAGAATCCAAAGGGTGCTCAAAGTTGGTA
TGCTAGACTCACCGATGAGCAAAGAGCGGAATACAACCATAGGCGGCGTGCAATATACAA
GGCAAAGAAGGCTCTTACAAATAATAGAGTTAACAAAGAACAAATGTCGCAACCAGATGC
AACTTCTGTGCTTGGTGCTCAACGTACCCCTTTCAGCAACATAACCAACACACTTCAAAA
TGGTACGTGTTCGTCGACTTCTACAATGTACTGTATCACTTAAAAAATAATGTGTTTCAT
TTCCTCACGTGTTGTATGTATGCTTACGACTGCAGCCTCAGGGAGTACTGACCATCGGAC
CATGGATGTTGGTGATGCTAGGAGCCATTACCAACCAGCACACTTGTCAGGAGGTGAGAA
CTGTTATACGATCAAAATTCCAAATCCATACAAAATATGATCAAAATTCGTGACTTGTCT
GCCTCCTGGTGTGTAAGGTACCAACTGTACGGGTGCAACCTCCATAAGTGTTGATCATCA
ACATGATGAGAATTATGTGGGCTGCAGCCGACAAAGCGGTCGTGGTTCACATGTACGTAT
TGATCAACATGAATCAACACAATCCGGGGACAACTTAGATGCTTAACCCGCAATCTATTA
TTTTTGCTATGGACGAAGATTCTCATATTGATTGGCTACACACTAGTCCAACTTACCAGC
GACACAGAATACCCGTTCAAGATAAATCTCACATCTCAGTTAATGAGGGGATGCATTGGC
AGGAAAGCTATCTACCCAACTTAGGTATGCATATGAGTAATTGTTCACTCATTTTTTAAT
ATATTGTTGCATTTCCTGATTATTTACTGAATTGGTATCGGATGCAGTTGCATCTTCTGA
GAGGAAATGGCGTCGTATGAAAGAAAAATATGCAGGAATGACCGGTGAAGAAAAGGATAT
TGTGTTGCATAGAAAGCGTGCATATAAGATGGGAACACAGCATACTCTGCCATTATCCGA
CCAATCCCACATTACTCAGGCAGGAAGTGCAAGTACATCAGCCATACATAGGCAACCATT
CATACAATGCAACCGTAGTGGTGTGTTTTCAACCGTTGTACTCCTTTCAGCTTAATTATT
ATCACCGCTGCATTTTCCTTCGATTTGAATGTGTCTGCCATCTAATAGTCAATATTGAAC
ATACCTTTGGGTGGTGTGCATGCAGATGGCATTAACAGTGATGAAGAGCCTGATCTAGCG
GGAATATTTGAGCCTACTGAGCCATCTGCAGAAGTTGAAGGTATAAATGCTTTCAGATTT
CATGAAGTATTACCATAATAATAATTCATAGTAACATAATATTGCCGAAATATATTGTTT
TCAACTGATTTACTATATTTCCTTTCCTCGAAACCCTGCACAACATACAAGATGAGCAGC
CAACGTATGCTGATGATGAGGAATGTAGGATATTTAGTGGACAAGGTGACCTGTATCAAG
AATGCATATATCCTGATAGCATACATATAATGACACATTTTCACCCCATAATTACTGTAG
GTGATGACTTTCAATCATATAGAGTGATGTCTGATGGTTCGCATGCTTTTGAGACTCATG
ATCCATATGACTACGTCTATGATAATCTACCCACCTGGCATCATGTTTTGAAGCCAGTCA
AAGACTGTGACCATTGTGGAGCAATGAGGTTCCAGTATGAAGGTCCAGCCTTCTGTTGCA
GAAAAGGTAAGGTCAAGGTATTTATCCCAGAGGTTTCTCAACAGCTGCACCAATTGTTTA
CATGCCAGGTAGATAAGGATGCAAAGTACTTTAGAAAACACATTCGATATTTCAACTCTC
ACTTCGCCTTCACAAGTCTTGGAGTTACCCTTGACCATCGGGTCAACACGGCGGCAAGAA
CTGGTGTATATACATTCCGTGCTCATGGTCAGCTGTACCATCGTCTAGACCATTTGGTAC
CAGGTGGTCACGGACCCAGGCATCTGCAACTGTACATTTATGACACGGATGAAGCCTTAG
AACATAGAATCAAGCGCTCTCCAGATCTTGGTATCGATCTCATATAGAACATTCTGCGTA
TATTGGAGAACAATCCATATGTGCAAACTTTTAAGAGACTTTGTTCTGTTCCAGACCTAA
CAGAATATAGGATTACGCTGAATACAAATATAAAATTGGATCAGCGGAGGTACAATGCCC
CTACAACCTCTGAGGTGGCTGCAATGTAGGTTGAAGGGAGTGACCCGCAACACACCTTTG
ATAGAAGTGTTATGGTGCATGGACAAGTGGGGCGTCCTATATACATAAGAGCCTACTACA
GGTGCTACGATCCTTTGGCATACCCATTATTTTACCCGGCCGGGGAGACCGGATGGAACC
GTTGGCTGCCATATGAGGGAGCACCTCCCGCGCAGACAGGCAATGAGGACAACGATGACA
ACCAGGACGATGAACATGAAGCAAGTAAAGGTGTCATAACAATTAGGATACGAACCATGA
ATTCCTCCAACCTTCCTTAGTAGGACCCTACATAATTTCTTGTTGCAACCATCTTGTAGA
TGACAACGAAGCACAATATGAGGACGAAGGTACCGAGTCTAAAAAATTTGTCAGTGCGAG
GGAGTATTACTGTTAGAAGTTGCAGATGAGGGAAGGAGTTTTTAACATCGTAACGTTTGG
GGGGCGTCTTTTCCAACAGTGGGTTGTTGACATGTACATCAAAATGGAGACTATGAGGCT
TGATTTCTACTCGAAGCCTCAGAATCAAAAGCGAATACGTGCTGAGCTCTACCAGGTAAC
ATAAATCTCCACTCACATGAACGTACTACGACAATTTGTCACGCACCTGTATGTTAGACA
ATAACTATGATAATCCAAACACCAAGAATGAGCCTAATGTATTTTCTTGTTGGTGGTCAT
CATGCTTGATTTGTAAAAGCAATAATCAATGATGAAACCGAATCATTTGTTCCATAGGGT
GTTGTTGACACGATTGCTTCCGGAGAGACGCGCTGCTCAAATTGGAAAAAGAATCGTGCT
TCCTTGGACTTTTCTGGGAGGTGATCGAGACATGCAGAGAAGATTCCTTGATGCTTACTG
GGAGGAGATAACTTCAAGACTTGCATCCGGACAAACACCACAAGACCGTCCTGACCTGGT
GGCCAGAGTATATAGGGCGAAGATACGAAGTCTGAAAGATCTTGTCATAAAAAAGAAGTA
CCTTGGTCCGGTTGCAGCGTATGCTCATGTTACTGAGTTCCAAAAGAGGGGTCATCCGCA
TGAGCACTTCCTGCTGATCATGGACTCCGATAGTAAGCTCACAAGTCCAGACGCCTATGA
TAGGGTAATCTCCGCGGAGATCCCTAGCCGTGAGAAGTACCATGTGTTGCATGGTCTGGT
TATCAAGCACATGCTCCACGGACCATGTGGTATTCTCCAGAAGAATTTTCCTTGCATGAT
AGATGGCAATTGTTGTTTTTGTTACCCTCGACAGTTCTGCCCTGCAACACAACAAGGAAA
GGACTCATACCCTATCTATAGGAGAAGGGATGTGGACGTCGAGTAAAAGTTAGGAATGCA
GTGTTGGACAACAGATGGGTTGTGCCATACAATCCCGGACTGCTTATGAGATATAATTGC
CACATTAATGTTGAAGCTTGCT
