Contig Data
morexGenes
Links



Map Locations of contig_78786 (2171 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_78786

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78133 1 1160 bp MLOC_78133.1 Available Available LOC_Os03g04020.1, FRAME:+2, EVALUE:2e-104, 13103.m00408 protein expansin precursor, putative, expressed





CDS Structure of MLOC_78133






Contig Sequence (2171 bp)

>contig_78786 2171 assembly3_WGSMorex_rbca.fasta
TTGGCTTCGAGATCTTATGGGTTTCAACTCTAGCCTACCCAACTTGTTTGGGACTGAAAG
GCTTGGTTGTTGTTGTTGATGATGCGTTTTTTAAATCCTGCAAATCAGAGCGGCCTTAGA
CTGTTTGTCTATTATCAAGAGAACCAATGCTTCAACGATTGATCGTTCGTCGGCGGGGCT
CATCACTACTGATATCAAGGTGTTTGAGTCGTTCTTCTTGTCCGCTCGTTTTAGTCTCGT
AAATCATTTGTCAAATGTCTTGCACATATGCACGGCAGACATGTGTAATGACGAGGGTCA
ACATGCATATTGCATATGTGTTCATTAGTAGCACATTTTTTTAGAAATATCGTTCTTTAT
TGATCAAGTAATACCAAGAGTGAGTCTCTTCCGGATACAAATCCGAAATTACATGAAAAA
TAGTTACGAGAAGACTCGGAAGATCTAGTCGGAATATTGGTGCAAAACACTCGGCTAAAT
AGAGGTATGCGTGTGCCTGCACGTAAGGGAGGGATCGCAATTAAGTCAGTCAACAAGATC
ACCGAGGTTGTAGTTGTAGTGTGTGAGAGCCAGAGAGGTGTGAGCCGTGGCAGGTCCTGT
TGATGGTGTATATAAGCCGCCGTGAGGCACAACACAAGGATCCACCACCCGCAACGAAAG
AAGAGAAACGATGGCCGTCTCTCTCGGCTCCATCCTTTTGCTCCCGCTCCTCTTCCTCTC
CACCCTCCCGCCGCCCGCCTCCGCCTGCGACCGCTGCGTGCACCGCACCAGAGCCGCCTA
CTACACCTCCTCGCTCACCCTCGCCGGTACGATTCATACGCCTGCATACACATGCTCTGT
TTTTACCTATGCATGGCGCATGCATGATTCTGATTGTTCGGTTGTCGTGTCTTGCAGCCG
GTTCCTGCGGGTACGGCGCGGCGGCCGCGTCCCTCAACGGCGACCTGCTCGCCGCTGCGG
GCCCGTCACTGTACAGACAAGGCGTCGGCTGCGGCGCGTGCTTCCAGGTGCGGTGCAAGG
ACGAGGAGCTCTGCAGCACCGCCGGCGTGAAGGTCGTCGTCACGGACCGCGCCAGCACGA
AGACGAACGACACCGAGCTCGTGCTCAGCAGCCCGGCGTTCGCCGCCATGGCCCGCCCCG
GCATGGCCGCGCGGCTAGCCAAGCTCGGCGCCGTCGAGGTCGAGTACAAGAGGTAATCTA
AACTCCTCCTGCTTTATTTCGACGTCGAGCACTAGAAAAATTGTCATTGCTGCCGCGTAT
GTGCAGGGTGCCGTGCGAGTACGAGGGCAAGAACCTCTCGGTGCGGGTGGAGGAGCGGAG
CCGGGCGCCCAGCGAGCTGGCCATCACGATCCTCTACCAGGGCGGCCAGACGGACATCGT
CGAGGTCGACGTCGCGCAGGTCGGATCGTCGTCGAGCTGGAGTTCGCTGACACGCGACCA
CGGGCCGGCGTGGAGCACGAGCCTGGCGCCGCCGGGGCCGCTGCAGCTCAGGGCGGTGGT
GACCAGCGGGTTCGACGGGAGCTGGGTCTTTGCCGAACATGAAGTCCTGCCGCGCCAGTG
GCACGCCGGCGAGGTCTACGACACCGGCGTCCAGATCACCAGCATCGCGCAAGAAGCCTG
CTTCCCCTGCGACACGCAGGAGTGGAAGTGACGGGTGACGGTGGAGAAACATGCATGAGC
TGCACTGCTGCAGCCTGCAGCTAAGGTGTGAGATGCTACGTAGTACTGTATGTAGTATCA
ACATGTAGTGATAACGAAGGCGAGGCCGTGGCCTGAATCGCCGGACCTGCAAAATACTAC
TCGATGAATAACGTCGCATGCATGTCGGGGCCCCGTTGGTTTCGGCAATGATGTTCTTTG
CTCGATGACATAGCAATTTTCATTCATGGGCGCCGAGCTCGATCAGGTGGATGGGTCTGT
TGGTGTCGAGATTAATTTGTCGGACGACGGACGAAACTAGCCGTTGGTCTTCCTCTTCCA
GGATTCACTGAAGGAGCTGAACACAAAACTTCAAATGCAATACTGCAATGAGCATAAGCA
CAACGGAGACGCGTATGAACTGAGCTGAGCACAGTTGGTGACTCGCATGCGCCAATAAAA
GCAACTCTATCCGCACGACCCAAACTCCGTATTGAGGAGTTGCAGGAAAATGATGTTTTG
AGTCCTGAGCT