Contig Data
morexGenes
Links



Map Locations of contig_7842 (3128 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7842

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_78051 3 1278 bp AK371006 Available Available None





CDS Structure of MLOC_78051






Contig Sequence (3128 bp)

>contig_7842 3128 assembly3_WGSMorex_rbca.fasta
TCAGACTTATACCCACGACAACGCCCCTCGCTTTTTTGTGGCCATGGTAGACAGACGTTG
CATAGTGAGGCAGCAACGCCACGGCTTGTGACATTTCTAGAAGGGTCAGATCGTGAAATG
CTTTCAAATCTGGTTCATTTTGTGCTCATGTTTAGGAAAAAGGTTAAAACAGTGAAAAAA
TCCCCCGTCTGCAATTCATTCACAGCATTCATCCCTCCCTGTCTGTAATTCATTCACAAC
ATTCTACCATTAAGCCTATGGTGTAAACACATATACTCCCTCTGTCCTAAAATTCTTGTC
TTAGGTTTATTTAAAAATAGTTGTATCTAAATACTAAAACATGACTAGATACATTCGGCC
TCTAGTTGTATCTAGATACTAAAATATGTAGAGAAATGTAAGACAAGAATTTTGTAACGG
AGGGAGCATCTACTTAATGGCCTCCTCATTTTGGCCTTACGGATAGATGATCTCCTCAAG
TTCATACCGAAATTAGCATCTAGGGTCTGACAGGGAGCTACAGTTCCTTGACCTGCCTTC
GGTACGTGCGCACGAAAAGCAACCAGCACAGTAATTTGTTGCCTGCAGTAATTTCCCACG
GCCACACCAGCCAACCAGCATACAACGCAGGTAACGCAGGGAAAACAACGTAAAAAAACG
GAGTCACTCTTTATTCAGTCAAACTACGCAGTAAGAGCCTGCCTGTCACCGTGACTCAAC
CGACCTGCAACCAACTTATAAGCGCGTGTCAGCCACCAGACTCCAGGCGCAGCGGATCCG
TCTAGTTTTCTTGAAGGCGTAAAATTTACATGGCTCCCAGTCGGGGCCAAGATCAAAGCT
TCTTCACAGTTTCTTCCATGGCACGTTCGTAGTATCTCATTCTCTGTGTAGCTTCCACTG
CGCTGTCGAAGTCCCTCTTGTCGAAGGCCTCCTGGAAGGATTTGGACCAGGTTTCGAGCT
TACTCTTCACCTGAGAAAGGTTGCAGCATACAATTTGAGCAAATCATGCTTCCCGATAAT
GGCATACGGTGTAGTCATGTTCAGAACAACCTGAGATTGGATCTTCTTCAGAGTTTGGGA
ATCGCCGGCTTCGCTAACTGCTTCGCGTATCTCCATCATCTGCAAGTTAAACGAAAGTAC
TGTTTTCTTCAGAGTGATCCTGGGCTGAGATATATTTCTCGGTGAAACAATAATTCTTCT
TGCAGCTATTGGAAGTAAACTATATGAAAACATAATTCAATGATTTTTGTTGGCCGCATG
CAAAAGCATAGGGGGAGATTGTTTTACCTCCATAAGAAGTTCCGGATCATTGATAGTCTT
CTCCTCATCAACGTGTATTCCCTCAAGTTGCAGCTGCCAAATGGTTTGGTATGGTTGAAA
AGCCTTTTGATAGTACAATTTCCTATTTACTTATGTATAAGTCGGCAAAAGAAATAACTC
CCTATAACCATAAAAGCTGGCTAGCATACGGATGGTTTTGTTCTTTCTTTCCGGGTTAGG
CTGGGATGGTCCAACCAACAGCACATCATTACATCGAGCTCGATTAAAAAGAAATATCAG
GATGATTGAATACTCCTGCATAAGTGGAACTTAAATAAACCACTAGAGCAACTTACCAAG
TACAATGCCCTCGGTAAAGGTTTGCTCAGTGTGCGATATGCCTCGATGACAAGTGCTGAC
TGTCCGGCTGCAAAATCTCTCTCTTTCTGCATGCGACATAAGCCATATCAGAAGAGGTTT
GAAGGCTCAACCTAAAATGGGAATATCTAACTTTTGCTCGGAATGTCAGTCTCTACCTCT
GATTTAGAATGAACAAGGTCAGGATGTAACTTCTTCTGCCAGTCTTTGTACTTCCCTTCT
AAGTTGGTATCCTTTACGTCGTATCCTCTGTCCCTACAGAAACCAGTTAAAATTTCAACC
ACTGTTCTTTATGTTTAAGCTGTAGGGTGTTACTATACTAGAATGAACAACGTTTGCAGT
GTTAGGATCTTTCAAGAAATCATTTTAAGGGAGATGAATCAATGATATGATTACAAGACG
TGAGCAAGTGATGTTTAAGATGAAGCAAATGGTACAATATTCTAGCATTACAGGAACAGA
CAAGTGCAAGGGTGGCTGAAGATGTTCGGAAATCCCATCACATTATATAGGATACCTAGG
ATACAAATGTCCTACTCGGACACGACTCCGTGCCCTATCTACACACCGTACAAATCGAAT
TCTAAATGTAAACTGACTTGTACAAATATTCGACGGAATTCCAATAGAAGATATGCATCC
AGTTATCATAGGTACAAAGTAACAGAAGATATACATCCAGTTATCATAGGTACAAAGTTG
TGCCACACATAAAAGTTCACTCATCAGCCAGTCCCATGCCTTATTATTTTGCTTGATGGT
ATATGGGGAACACAAAAGTTCGAAAGAATATCAGCCAGAACTCCAGTTTGCAAGTTGTAT
GCACAACAATTATTAGCCTAACTAGGCTAACATTATGATGGAAGCAAATTCAGGTGTGCT
CACAAATTATATTTGTTAGGTACGGATCACCAGATGCGGCATTTCTCACAAGAAAAAAAA
TACAGTTGTTTCGAAACTAGAATACCAGCAAATTCAGCAAAAGACACATCACAAAGGCAA
ATATGGCCTGATTGCCCACAAACACGCAACAAAAGATGGCAAGGTTCCGGAAGGTTGCTA
CTCACAGGCCAAATATTTGGAAGTAGTCGACCGCGGGATCGACGGGCTGCACGCTCCTGC
AGGACCCACAGGAGAGGAATGCCCCCTTGGAGCCACAACTCCAGCACTCGCCGCCGACGC
CATCACTGCCTGCCTGGTTCGATAGGCTTCGAGAGGGAGGAACTTTGCTGGAATCCAGAA
AGGGTCCAAGATTGTGGTGGAAAGAGGATGAAGCGGAGGTGGAGGTTGAGAAGGTGGCTG
TTGGAGCAGGAGGCTGTGGGGGTCGTCGAACGCGGCCGGCGATTCTTGCGAGGTGGAGGC
GGATCAGTCCAGATCGGTGCCACATGGTCTTTGGCTGGTGGACTCCTCGGCGGGTGAAGG
CACGAGGAAGCTCCGGAAACAAGGAGTCCTACTGAGTACAACGGCAGAACGGTTCGCTAT
TGGCGGGG