Contig Data
morexGenes
Links



Map Locations of contig_78165 (2701 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_78165

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77982 1 1512 bp None Available Available None
MLOC_77983 1 1072 bp AK358688 Available Available None





CDS Structure of MLOC_77982






CDS Structure of MLOC_77983






Contig Sequence (2701 bp)

>contig_78165 2701 assembly3_WGSMorex_rbca.fasta
ATTTTATGGCTTGTATAGATCCAACATTGGGATTTTCCATCCAGTAAAGTTCTCTGAATG
TTTAGTTTCAGTCTTAGAATAGTTCTGTTCTTAACATAACTGCACTTTGAAATATTTGTC
ATGGTCTTACTACCGTTATGTCAAACACTGAGACCCACTAGATGTAGTTGTGGCACTCAC
TGACAGTTAGTTTAGGCATTTTTCATATATAATGACAGTGTAAACTAAGAAAAGCTGGTT
ATATATGCACTGAAATCCAGTAAACTGAGGATTTCCTTGGTAGTTATATATGCACATAGC
CTTGTATTTGCTACCAAGGCTCAGTTTGCAATTCCTGAACTGTGCTGCATTGTGCTTGTT
TTATAATCTGCTGTGGGAAAATAGGCACGAAACTAGAGGTAAGTTGGTTAAACAAACATC
AAAAGAGTTAAAAGCTGGTTGGATAATCTGGATTATCATCTTCCATATTGAATGGTTTGT
CTTCCTGATGTAATTCAAATTTTATATGGAATCTTGTGTATTGAATGGTTTGCATATTGC
ACTAGCTTTGTTGCGCGAGAAGGTGAAAATGAGTTTTGCTCGAACATTTACCTTCAGTTG
TGTAGCAAACACAACACAGCCAAAAACAAAAAAACCTTGTAAAAAATTTAAAATATTGTA
GATAGTAGGTCTCCTGGTCTTGAGTTGGATCTAGAGAGTAGTATTGTAGTTGTTTACTTC
GCTGTTGTTTCAGTAACCTCGCTGTTTTGATGATGGCTGACAAAATTCAGTAAATTTGAT
GAATGTTGAATTCAAGGGACTAACTACCTTTGCTTTCCCGATGGCAGAAAAATGGAAGAG
CACAAGCCGAAGAACTAGAGGTTCAAGGCCAACGAGAACAAGCCTGTAATGAACGAATGA
CCATCCTCCGGACAGTCCGATGCTTGCAAGGCTTAGCTGCCAATCATGTGACTCCTGTGT
TAAAATGGATGGTGTGAACATTTGTTTGGCCGTTCTGAAAACTATCCAACTATCCAGTAT
CTGTGTTTTGAGTTCCTATATCTGCACTGCATGCCTGGAATGATAAATCAGTAGATTTTA
TCGTGTGATGTGTTCTCGTGGACCATTCGTGGTTTTGGAATCCACTTCTATATGGTGATT
CGTGTAGCATCTTCTTTGCTGTCGATACTATTTCTCACGTTTCTTCTTTTATGAACAAAC
CTTTGTTCTAAGTACAATTCTTCCGTAATTTTTTGAAGGTGTAAAAATTACATTTTTAAT
TATAGTATACTCCTGTGTATGAATCCCTGTGTACCAAATAGAAAGGATGTGAGAGGATTT
GAGGGGATTTGAGAGGATTGGGTGGAAGAGGGGGATTCACCAAATCCCCTGAAATCCCTC
CATTCCAAAACCTTCCCAATCCTCGTTAACCAAACTAGGCCTCATTGTGTGGATCAGAGG
CGAGCTTCTCCTCGCCTCCTCGGCGTCTGCGAGCATGTGACGGCTTTGTTTCTGGATGGA
GCAGTGAATGATGGAGGCATCGAGGCAAGCCGCGGTGCCTAGCGGCGAGCGGTTGGGGAA
AAAGATGTGGTACACAACAGTCAGCGGGGTAGTGTAGTCGTATATGAATATGTAGATTTT
TTTTTCAATTTTCTTAAACTCTAAAATGTAATTATCAAAAAAATCGAAATATTCATCTTC
ATGGAGGTCGACCACCAAAAGCCCTCTGCATTTCGGGTGAAAATCTTACGGGACTCCATT
TATTTCTCATCTAGTACTAACTCCGATGGGATCCTCACGCACACATCTTAAATCAACAAT
CTGTTCTTCAAAGGGAAAAGGTTGACGTTTCAAACCCGGAATCTCTTGAAGTTGCCAAAT
GTCGGTACAGGTTAAAAGTAACTATGGAAGATTGACCGTCGGTAGCGCGGCCGTGACAGC
GCCAACTCCGACGGATGCCGCCCCCTTCACGCACAACTCATTGGAGTGGTCTGACACGAC
GCTGTAGTTGCTGCTGGTCACGTTCCTGAAGTAGCATCCGTCGGTGGCGTTGTACCTGTA
CGTCTGCCGGACGCCCCACGACTTGCCGCCTCCCTCCTCGTCCTCCACGAGGCTGCTCTG
CGTGGTGCGCAGCGACCGGTACGGCGGCGCCGACGACCACCGGCCGGCGGCCACCGTCGT
CTCCTCCAACCCGTGCGTGACGGTTAGGCTATTCTGTTGATAGACCCAGCCAAGCGGGAA
GTTGCCGTGCGTCTGCGCCGAGTACATGACGCCGCCGGCGCCGTCCGTGGCGACCACGCC
GGTGTCCGCAACGATGGTCAGGTCCAGCGTCTCGAAGGTGAGGAGGTACACGAGGGCGAA
CGTCCGCGTGGAGTTGGTCGTTATGTTCCCGTACGATGACTTGACCCACCCGGTGGCGGA
GACGAGCCGGTTCGCCGTCGCGTGGTAGTGGGTGTCGACGGGGTCGGCGGACTTGGACGA
CGTCGTCTTCGCCGCCGGCGCGACGTAGCTCACGAGGCCCGCCGTCGTCGCCGTGCCGCC
GGGGTCCAGCCAGAGGTGGAGGTTGGCGCCGACGTACCATACGCCCACGGCGTTGGTCAC
CGCGAACGCCAACTCGTGCGCCTTGCCGTCCAGCAGCTTGCCCAGGAAAGGCGTCAGCTC
GATGTCGTACGTCGGGAGGTTGAAGGAGCCGATGGGGGCGATTGGCCGCCATAGGAGCGG
G