Contig Data
morexGenes
Links



Map Locations of contig_78142 (5753 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_78142

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77973 1 1085 bp None Available Available None
MLOC_77974 1 3986 bp MLOC_77974.1 Available Available LOC_Os07g48630.2, FRAME:-2, EVALUE:5e-102, 13107.m05212 protein ethylene-insensitive 3, putative, expressed





CDS Structure of MLOC_77973






CDS Structure of MLOC_77974






Contig Sequence (5753 bp)

>contig_78142 5753 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCTCTTAAAATCGTCACTGTCGATATGAATCACATTTTCAAATA
AGAGAGCCATCAATCGAATTACAAGATCACAAAGACAACAACGAAAAGTACATGATAAAA
AGGTGTCGGGAAGGAGGAGGAGCACGTAAACAAAATTTGAGGACTCATGTCCTGGTTGTC
GTATAGAAAATTGCAAAACATGTTTTGTAGTATTCCTTAAACAAATTTCGCACGTCTGTC
TCAATGAATCTGATCCGGTGTCCAAAAATGTTCAAGCAGCTCCGCGGTCGCTCAGTCGTA
AGAGCATTTCTATCAGGCGCGTAACGGCGCGGCGCACTAAAATAAAGATGCAATGTTGAA
ATAGTATTTTTTCGCGCCGCAGAACGCTGGCTTCAGCGGCTGCTGCAAAAAATTGTATGT
GCAATCGTCGCTTCAGCAGACGCGCGCGCAGCCGACACTTACAACATGTTCATTTTGACA
ATATAGTGATATTCCAAACATAAAAAAAATACATAGTTTAATTGCACGACATATCAACAA
TCATGCCACATCATCCTCCAACCAAGTCCAAAATTACCCAACCAAGTTCATGACATAAAA
GTTTTGACAAACAAACAACACATCAACAATAATGTCGCATCCTCATCATCGTCCTCCTTT
TTCTCCTATTCTTCTTCCTCATCCGGAGACGTTTCTTCCTCCTCATCTTCATTGTCGCAC
GCTGCATCATCATCGAGAGCTCGAAAGGTGTTGGCAAGATCTCCAACGATATCATGCAAA
GGTATGTGAGACACACCGGAAGACATGTGTCCATCCATGTCACCCGAAGATGCTCCCATG
CCTTCCATGAGAGACCCAAAGCTCATGCCTCTCATGCCTCCCATGGTAGAACTGAAGCCT
CCCATGCCTCCCATTGTAACACCGAAGCCACCCATGTCGTCAATGATAGCTCCGAAGTCA
CCCATGACTCCCATGCCTCACATGTCACCCATGTCTCCCATAATAGCTCCCATGCCACCA
ATGCATGTGAGAATTGTTGGAGCTAACACCATAGTTGTTGGAGACCAATGAGAATTGTTG
GAGCCAACACCCATAGTTGTTGAAGATCAATGAGAATTGTTGGAGCCAACACCCATAGTT
GTTGAATACCAATGAGAATTGTTGGAGCCAACACCCATAATTGTTGGAGACCAATGAAAA
TTGTTGGAGCCAACACCCATAATTGTTGGAGACCAATGAGAATTGTTCGAGCCAACACCC
ATAGTTAAAATATATGTCTCATCATTGAAACTACAAAGTATATACAACAAAATAAATAAG
CTATCCATATGTATCCATCATGTAAAAACCACAACAAAAAGAAGTGGGCGAAGTCATACC
TTGTGGCCATTTCATCGAACACGTTGTGCGCATCGGCCGTCGGCGCAATAAGCGATCTCA
CTGGCGCTTCGGTCGCCGCCGCAACCGTCGCATTCCCTGCAAGATTCTTCTAGGGTCGCC
TAGAGGAGTCGTCCGCCGTTTTGTTCTTCTTTCTGGACATCTGCCTTCGCCACCGTCGCA
TTTGGAAGCTTCGAGAGGGGGGCACGTGGTTTCACGACGCGCGCCTGCGCGACGTCACCT
GCGGAGATCGGCCGCGGCGCCATGAAAAGTCCGTGCACGAGACCTTTGGTTGGAGGAGCA
CCGGTGGAGGCGAAGCTCCCCGGGCTATGGTCGGTCGTGGCGGCGGCTACGCCGACGACA
GAGGGGTCGTGGGCGTAGGAAGGGGTGAGGAGGATGTCGGTGCGGCCGTCCATTGAGCGA
ATTCGCCGGCAGCAACATAGGACGGGGCGAAGCTGAGGGGGCCGGAGAGGGTGGCGACAG
TGTGACGCGGACGCTTGAGTGTGCAGCGCGCGGGAGCGGACGCACGAAATAAGCAGCGCG
CAATGCTGTCTCGCCCCCGCGCGTTGAACCATTTATGCCATGCGCGTTTTTTACGTCTTC
ATTGAAGCGTCTGGAACAGTTACACGCGTGTAAAATTTGTAATCTATTACGCATCCGTGC
ACGAGACATTTGTTTGGAGGAGCACCGGTGAAGGCAAAGTTCCCGGGGCTATGGTCGGTC
GAGGCGGCGGCTACGCCGACGACACAGGGGTCGTGGGCGTAAGAAGGGGTGAGGGGGATG
TCGGTGCGGCCATCCATTGGGCGAATTCGCCGGCAGCAACACGGGACTTGGCGAAGCTGA
GGGGGCCGGAGAGGGTGGCGACAGTGCGACGCAAACGCTTGAGTGTGCAGCGCGCGGAAG
CGGACGCACGAAATTAGCAGCACGCAATGATGTCTCGCCCTCGCGCGCTGAACCATTTAT
GCCACGCGCGTTTTTTTACGTCTTTGCTGGAGCGTCCGGAACCGTTACGCGCGTGTAAAA
TTTGTAATTTATCTAGCACTACGGTAATATCGCACGTCTTGTTGGAGATGCCCTGAGTTG
TAGCCATCGGATCGCGCTGAGGCCTCAGGGTGGCGGGTTCCGTGCTTTGTCCGGCTGGCG
ATCGAGTGTATCCTTTCAGCTTGGCACCGATAATTGTCACCGCAGTTGTCACTCCACGAG
ATGCAGAAAAGAGGCTCTGATCTTATCACGCACAACAGAAACAGAAGCAGAAACCCTCCC
CACCACCAAGACGTCGCGTAGCCCGTCCCTCCATTTGTGTGGGCGCATCTCATGTCATGA
TCACATCACGGGCCGCCGCTTCGACAGTGCCACGGCATGTTCCAGATAGGAACAGCACCA
AGAATCAATCGGCTAGTCACTCAGTCCCAGATCGAACAGCTCGTGTGCACTGTGAAGCAG
CGATGCCGATGGGGTCGACCACCATCAACCTCCTCTCGCCAATCGCCGGCAGGCGACGTG
TGATTCACAGGTTCAGTGTAGCTGATGGACCACCGCACCGCAGCATCGCGGCGGCCTCCA
CGCCTGCCGCGTCGATCGGGCGCGCGGCGTTGCTTTCGTCCAGCCGGCCGGCAGCCCGCC
GCTGGTCTCTGACGCGCCATCGTCCTTCGCCCACGCTGATGCGAATTTATTCAGTCTGTC
TGTCGGGGTCCAGGCGGGGCTTTCAGCGCTGTGCTGATGCACTGTTTCTCTCGACGTAGT
ACAGAGTCAGGCCCATAAAGATGCATTATTGTTTCGGAGATCCGCACCGTATCCAGCTAA
GAAGCACAAATTTGGCAAACAGTCTCTACGGTTAGTACTACTACATATCTATAGAAAATC
TCACGTTTGCTGATGAACAGACGCGTCTCACAGTTGCTGCAGATTCAATTCATACGGAAT
TCTGCATCTCAATGGTCAAAGGTTTCAGACAGGCAACCAAAGTAGCAGCATAAATATACT
CTCATGTTTCAAGCAACAATTTTCGCTTTGTTACTTTCAGAAGAGTGACTAGCCCACCAA
ATTAAGTTGTTCCTCTTCCCACTAGCCGATTAACAAGGACCAGTAGGAATTAGGAGATGA
CCGTGGACGAGCAGAGACAGAATATCTTGACCGATTGAATTGTTCTTGAGAGAAGTTCAA
CGCTGCTGCCAGTTAGCTAGTTCCTCCTTTTTGCACGTCGCGGGAATCTTCAAACAAGCG
TGTCTACTGATTTATCTAGTGCTAGCACTATAGTAATCAAAAAAACTGATGGCATGTGTT
CCATCAGAAACCAGCCGCACAGGAGTGCTAATCAGGGGTGCTTTATTTTAAGGGGCGGAT
TAGGTAGATCTCGAGAATGATTTGGAGCCGACAGGGCCCAGATTTGGTGGCCTAATAGCT
GTGCTTAGCCATTTTGCTTGGAGACGACTCATCAAATGTGTACAGAGGCATCTTCAATCA
CATGATGGTCCCTGAATCTGACACTGTTCGTTGTCTCTTTATTTTTGTCTGTACGAAGTC
AGATCCAACCAACAGTCTAAACTGGATCCTGGTAAAATCCTCAGATTTCTGCAAAAATCT
CGACCGGATTGCAACTGAAATCCCCCAGAATTGCACAGAAACCATCCTTTGCTGTGTTGA
TCCCGTCAAAGTCAGCAGCGTCTTCGGCTGCGTGTCGCCGTGTGCGGGTGCCCCCGGTTC
CCGGCGCTGGCCTCCGCCTCAGGTAACCGGTCGTTGTCATGGCGTCCCTGGCGAGCATGT
GATTGCGAGGGGAGATGACGGATGATGGATCGCCACTAACGCGCACACCATCAGTGAACA
GCGGAGCAGAAAGGGAGAGGGGGTGTAAAGCTACCCCATGGCGGCCATGAAAGGGCAAGC
TTTGCTCTTCTCGATCGGCAAAAGCCGCCTTTCAGTGCTTTCACAGTTTCACGAGTGAAC
AGACGAAAAGAAAAGTTCGTCGATGTTTTGGGTTGGATGAACGTAGGGATCCAAAGAGTT
TCGAAAGACGAAAGAACAGTTTGATTTCGGTGCGATTTGTGAAAAAAAAATCCCAGTGTT
CTGAACATGGCCTAGATTTGACTGATCCTTACAAGTTGCAAGGCGCCATGGACTGATCGA
GAATGGAAGCCTTATGAATTCTAATGGCCTAGAGCTACATGCTAATGAGGAATGGTTCCT
TGGCTGTTCTTGTTCAGTAGAACCAGTTGGGTCCAACGTGCTTCTGCGGCTGCTGCTGCT
GCATGGCGCCGGCGTAGTCCGCCGCTGACAGGTCGAACCCTGCGCCGAACCTGCCCAGCT
CCGGCGCCGCCATGCCGAACGGCGCGTCGTCGCCGATGAAGAACGCTGCGCTCTGATGAT
GCTGCTGCTGCATATGGTTGTTCGAGTCAGCAAGCGAGCGTGGCGCCAGATGGTTGCCGG
TGCCGATCTGCAGGCCGGGAGCGGTGTCGTCGCTTGTTGCGCCTCTGTGCGCGGCCACGC
CGGTCTCGTACATGCTCATCAGCCCGGCGAGGCATCTCTGGTCGGCCACGGGCAGGCCGA
AGTCGAACCCGCCGAGAGCCTGGCTCTGCGGGCTGTAGGGCGCCCCCGGGAAGAAGGCCG
ACGCCGGCTTGCTCTGGGCGGCCGCGGCGGGGTGGTTCTGGTTGTACCTGCAGGTGTACT
GGTGGGCGTTGCGCGCGTTGCGATCGAGGAAGCCGAGCGCGTGGTCGGCGTGCGGGCACT
GCACGTTCTCGCAGGTGTAGACGCGGGCGTTGCCGTTCAGCATCAGCTCCGGCTCGGCGT
CGGCGGGCGGCGCGCTCCGCTTCTGGGCGTGGGTGAAGCCGACGTCCGCGGTTTCTTCTT
TCATCAGCGCAGGCGGCATGATCATGAACTCGTTGCTCGTGGAAGCATCCATGGTAAGGT
CGACGAAGGCGGCTGCCTCGGAGCGTGCCTTCATCTGGTTCGCGGCCTCCTCGCCGAAGA
AGTCGACGTCATACTCGCCGGAGCTGGCGTCGAACGACAGCGCGCCGGCGGAGGGCCGCG
GAGGAAGGCAGGCGCCGGGGTGCAGCTTGTGGCTGAGCTCCTCCTCCGTCTTGAGCACGG
CGAGCCATGTCACGATCTCCCTGGCGGTCATCTTGTCCTGCAGGCACTTGGACTGCCGCA
CGAGGCGGCGGACCTTGTCGACGTCGGGCGACATGTGCTTGATGACGGCGGTGAGCACGG
CGACCTTCCACGCCTTCTTGAGGTCGTGCGGCTTCTTGTACGGCGGCGGGCCCAGGTCGT
CGGGCACGCCCGCCTCCTGCCACCACGCCAAGATCATCACCGACAGCATCAACAGGGGCA
GGCTGACCTTCATATTGTGGGTCAGGACCAGCGGCAGAGCGATCGCGTGGACT