Contig Data
morexGenes
Links



Map Locations of contig_78074 (2846 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_78074

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77955 5 1218 bp MLOC_77955.2 Available Available LOC_Os09g27450.1, FRAME:+2, EVALUE:9e-68, 13109.m02671 protein homeobox associated leucine zipper, putative, expressed





CDS Structure of MLOC_77955






Contig Sequence (2846 bp)

>contig_78074 2846 assembly3_WGSMorex_rbca.fasta
AGACGGAGAAGAAGAAGGAGGAGCAGGAGGACGCCGCGGCGGCGGCGCGCGCGGCCGTCT
CGTCCTCGCCCAACGACAACGACAGCGGGGGCTCCTTCCCGATGGACTTCTCCGCGCAGG
GCGACCGCGACGCGGCCCCGGCCGGCGGCGGCGGCGGCTCGCGCGGCAGCGACGAGGACG
ACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTGTCCAAGGAGCAGGCCGCGTTCCTGGAGG
ATAGCTTCAAGGAGCACAGCACCCTCAACACCGTAAGCATGCAGCACCAACTCAATCCAA
TCCAATCCATTCCATCCCACACCAGGAACACAAGTAGCGCGTTCGCTCAATCGTTTCCTT
CCTTCCGCCATGGCTGCAGAAGCAGAAGGTGGCGCTGGCGAAGCAGCTCAACCTCCTGCC
GCGCCAGGTGGAGGTGTGGTTCCAGAACCGGAGAGCCAGGTGCGGCGCGCTCGCTCCATG
AAATCTTTTCTTTACTCCTTTGTCTCTCTCTCTCTCTCGACCAAGAATCTCGGATGGCCG
GTCAAGCAAGAAGCAATTAAATAAAAGCTTTGGCTTTGGCTTTGGGTTTGGCGCGTGGTG
CAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTACCTGAAGCGGTGCTGCGAGAC
GCTGACGGAGGAGAACCGGCGGCTGCAGAAGGAGCTGGCGGAGCTGCGGGCGCTCAAGTC
GGTGCACCCCTTCTACATGCACCTCCCGGCGACCACCCTCTCCATGTGCCCGTCCTGCGA
GCGCGTCGCCTCCAACTCCGCCCCGGCCCCCTCGCCCGCCGGCATTGCCGCCGCTCCGGA
GCAGCAGCACAGGCCGTCGTCGTTCGCCGCGCTGTTCTCGTCGGCCAGGAGCTTCCCGCT
GGCCTCGTCCCCGTCGCAGGCCCCGATGCCGGCGCCGTCGAGCTCGTGACTTCCGCTCCT
CGTTGCCGTCGGAAGGGCATGTCTGTAAATACGCTCACCTTAATATTTCCGCTCCTCGTG
TCCGGATTTTTTTTGCGGCTCGCCATTCGCCGAGCGGCCGAGGGGTCTGTGAGAAACGAG
AACGCGTCTGTCGTCGGATTGCCTGCCTGAACGGCCGAGATGCTGAATTAAAAGGAAAAA
ATGTTGCATTAGCGTGCGGACGTTCGTTCGTTCGTTTGTTGTTAAACTGAATTAATCTCC
ATTTGGCAACAACAACAAAATTAATCTCCGTGCATTTTTTTACTACTCGCTTTGTTCCTA
AATATAAGACTTTTTAGAGATTCTATATACGAAGCAAAATGAATGAATATACACTCTAAA
ATATGTGTACATCACTATTTAATTTATAGTGCAATTTTTAAAAGGTCTTAATAAGAAGAG
GGGGTAGTTTTTTACAGTACGGTTTTAGGTCGTGCCTCGTGACGGGAGGATGTGAAAGCG
GAATTTTAGTCCCGCTTTTGGGGGGGTGAAAGGCACTGTGCCGTTTCTGTTGAGCTGTCT
GCACCGCTGATTTGTGAAATCATGACGCCCACCGAGCCGAGACCCGAGAGAGCGTGTGTG
TGTTGACGCCCACCACTGCCACTGCCACTGGCACTTGCTCTTTACTCTTTACTACGACTA
GGAGGACGAGTGATGAGATTTTCCTCGGAGATCGAGAGCGAAAAGATACGGCGTGGTGCG
TGTGCTCCTGCTCCTAGTACAAACTGTTTTGCAGCACTGAAGCAAAATACTACGTATTCG
TACTAGTCCGTATGCTGCCAAGTGCTGGTGGTACTAAGCAATGGTGTAGTGGCGTATGAA
CAATGCAACAGTGCTTACAACGGACGAGTGGTCGTGACTGTCAAGCAGCGACCGCGCCAT
ACGCAGGAGCTGTCAAGGCATACAACGTTGTACAGGTGGTCCTCCTCGTGTTGCCCCGGC
CGGTTCGGCACGCCAATGCCCGTTGCCTATTGCCATACCATACCATGCCCCCATCTGCTG
GCAACGCCACTGCTGCTACCCCCACCATACCCACCCCATCATCAAGTTCAACTACGTACG
CATTTTTTGAGCTCATATCCTCGCCCATAAGACGACCCCGTCGATGTAGTACCAAGGATA
GTGGGCATGAAGTTGAAGAGAGGAGGAGGATAGGATGAGGATCGGTGGCAGTGGCAGGCC
TGCCTCGGAGTCCATGTCACGGGTGACAAAGAGGACGGCGACCGATGAATGCAATGCAAT
GCAGGGTCCGTGTCATGACTCATGGGCTCGTGGATACGAGCGCAGCGAATCATCCGGTCA
TGATTCATCCATCCATTCATTTAACGCTCTATCGAGACTACGGCGAGGCCAAGCCAAGTC
TGACCCCAAAATCTTTCTCCCCGGATCACGGCGGCCGGCCATCAATGCCGCTGGGGAAAC
CGGCCGCGGCTGACCAGTAGCAGTAGGAGCAGCAAATTAAGGGTGGCCGGTCAAGGAGGC
CGGGAGAGACTCCGTCCGCCGATCCCCGCGCTTCACTGCTGCTTGCGGTTGCGGCCGAGG
GAAACCATGCGAATCTTCCGCGAGCTCTTGATGCATCTTTTACTTTTACTTCCGGGACGG
AACGGAAGATTCAGCGATGATGCCGATAGAATAGCACCCGTATTAGTAGTAGATGTTCGT
CCGTCCCGCTCTGGTGACGGTAACGTGTCCTGCATGGCCCGGTCTTCATGGCGCTTTTGA
TTAATGGACGTGTAGTGATCCTCAAACTTGTGATTTTAGGCCCTGTTTGGTTCCAAATAA
GTCATCAACTTATAAGTTTAAAAGTGTAAAAAATGACTTATTTTGTCAAACAGACTCAAC
TTATAAGGCCCTGTTTGGAACCATAA