Contig Data
morexGenes
Links



Map Locations of contig_78045 (4422 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_78045

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77952 1 1736 bp AK353847 Available Available None





CDS Structure of MLOC_77952






Contig Sequence (4422 bp)

>contig_78045 4422 assembly3_WGSMorex_rbca.fasta
CCCGAGCCCCCTCTGTCTCGCGGCTCCACCTCTGTTCGCGTCATCCCAATTTCTTCTTCT
CGAATTTGTTCCTCTGTTGATTTCCGTTGCCTCTTGTAAAATCACCAAGGCGCATGTATA
TAGAGTGATGAAATTATCTCTGAAGTACCGATGTGGGATTATGAGGGCAGAAGCGATAGC
CTTCTCATGCGCTTTCTGTCAGCCCAGATACGTTTCTTTTATCCAATGCCATAGGGGGCT
CTCTGCAAAAATGAAACGTTTTTATGTTTGTAACACATAAAAAGACTGCGGGTTTAATTA
CCTAAAAGACAGGGGCTTTTTTTAAAACGACAATAGGCTCTTTATTAGTATTAGGTAAAG
ATAAAGATATGACATTATTAAGATACAACTATTTGTACATGACCTAAGCTGTCGATGACC
AAGTCAATCCCGGACTTTTGGTACTCCTACCCAATTTTATACGGGCAAATTACGAAGATT
CAGAAACAGTGTAGACTATAGTTTTATCCGGAGGTGTGTACTTAAAGACAAGCTCGGCGT
TTATCCCGTACGGCATGCTACAGGTGCAGCTAAACCGAGTCAAAGTCAGAACTGGGAGCT
TGGAACAATGGAGCTCATCACCACCGCCTGGTCATCCTTTCCCCTGCTCATCGCCCTCTC
CCTTGCCCTCGTCGCTTCGGTCCTCTTCTTGCTGCTCGGCCGTCACGGGGGGGCGAAGAA
GGGGACAGGCAAGGCTCTCCCTCCCGGCCCGCCGGGGCTGCTCTTCCTGGCCAGGTTCCT
GGCGCTCCGGCGATCGGTGTTCCATCTAGGCCCGATCCTCCGCGACCTGCACGCGCGCTA
CGGCCCCGTCATCTCCGTCCGCCTCTCCCGCACGCTCGTCTTCGTCGCCGACCGCCGCCT
CGCGCACCGCGTGCTCGTCCAGGGCGGCGCCACCTTCGCCGACCGCCCGCCGCTCTCCGA
CCCCGGGCTGCTGTTCACCGCCGGCGCCCGCGACATCAGCACCTCGCCTTACGGCGCATA
CTGGCGCATGGTCCGCCGCAACCTCGCCGCGGAGGCCCTGCACCCGAACCGCGTCGCGCT
CTACGCGCCGGCGAGGCGGCGCACGCGGGACTCGCTTGTCCGTGACCTCCTCTGCCCGGG
CGGCTCTGGCGATGACGTCGCGGTGAGGCCGGCGTTCCGGCGCGCCATGTTCGAACTGCT
CGTTTACATGAGCCTCGGCGCAAGGCTTGGGACGGAGGCGCTCGAGGAGGTCCAGGAGCT
GCAGCTGCGGATCCTGCGCTCCATCACCAGCTTTCCCATCTTCTCCTTCTTCCCGGCGCT
CACCAAGAGGCTCTTCCGGCGGCGGTGGGAGGGGTACGTGGCCGTGCGCCGCAGGCAGGA
TGAGATCTTCCTCCCGCTGATCGACGCCAGGCGAGAGCGGGACCCGTCGCGCGTCGGAGC
GGACGACGACGGCCCTCCGTGCTACGCCGACTCCCTCCTCGCGTTGCGCGTGGCCGAGGA
GGGTGGCCGCCCGCTCACGGACGTCGAGGCAGTCAGTCTCTGCTCCGAGTTTTTGAACGG
CGGGACGGACACAACGGTCACCTCGCTAGAGTGGATCATGGCGGAGCTGGTGAACCGCCC
CGACATGCAATTCAAGGTGTACGAGGAGGTCAAAGACAAGCCCGAGCTCGATGACGGGGA
CTTGCAGTCGACGCCGTATCTGAAGGCCGTGGTGCTCGAGGGGCTCCGGCTTCATCCGCC
GGGCCACTTCCTCCTCCCGCACGGCGTGCAGAGCGACGGCGCGGAGGTCGGCGGCCACGC
GGTGCCCAAGGGCGCGGAGGTCAACTTCCTGGTCGCCGACTTCGGGCGCGACGAGTCAGC
GTGGACCGCAGCGAAGGAGTTCCGACCGGAGCGGTTCTTGGACGGCGGCGAGGGGTACGG
CGTGGACCTCACGGGGAGCAGGGAGATCAAGATGATGCCTTTCGGTGCTGGCCGCAGGAT
GTGCCCGGGATACACGCTTGGCATGCTGCACGTGGAGTACTTCGTCGGCAGCCTCGTGAG
GGAGCTGGAGTGGCTGCCGGCGGTGAAGGGGCAGAAGGTGGACATGACCGAGGAGCTTGA
TTTCACCACCGTGATGAAGCATCCGCTCCGTGCTCGCATTGTCCCGAGGGCTTGATCAAG
TTACTATGAGCATGGTTAATAGTATAGCTAACCCATCTTATAACTAGCTTGTACAATAGT
TATTTATAAAAAAAGTGCTAATTTTATCATATATGTCCCCCCTTCCATTCTCACAAAGCA
CAAGAGCACGTGCTAGAGCTGGCTCTTCACGGAGAGCCCGTTTTCCTTCTCTCTCATCCA
ACTCAACAAAAATATAGTATTTTAATCCTTACATCCTGCTGACTGTACCTTATTGTACTT
GCTCTATCAATTGCGATTCTGATAGATTCTGAATGAAGAATCACAATCAGTAATGCATGG
TGTCTACGTGTTCTCTGACGATTTGTACAACGCGAGACGCTTATATGTCAGTCTTTTTTA
AGCACCAATGCTTATCTTAGATCTTAGAACGTCTACAAACCGGACCCCTTAAACCCTTAT
ACAAAATCCGGGCAGGCTGCCTCATTACTACCAGCCACAAAAAATTGATCCAAATGTGCC
TCTCAGACCGGCCCCAAACGCCCGGGCTGACCGGCACCCCTCATTTTCAGCCCAAATATG
CGGCGAATTCGAATATTGGGGAGCCCGAACGCACACGGGCACGCCCGCCACGTTTGACCG
TGCCGCAAATTGCATCGAATCTACCCCATAGGATTGCCGGATCCATTTCCTATTTCTCGC
GCTTCTTCCTCCACACGTCGTCTGTCTCGCAGCTCTGCCGCCGTGTGCGCTCCGTCGTCT
AGTAGCCTCTGCCATCCAAGCCCCTCGTTCAAAGAGATCATCTCTCCCGACCTCTCCGCG
CAGGACGTTGTGGCAGAACCGGAAAACACCATCGTATGTCCGGCAACTCTTTGGATGTGC
CTTGCGCTGGATCTGTTCGACAAAATGTCTAACTTGATTCATTGGTCAAATTTTTAGGGG
AAATGATGAATTCCGTTGTATCGACCGGCGAGGAGTATGGACCAACAGACCTTGATCAAC
TGATTCAAGATGAGTTCTTTGATTCATCGGATTCGAATGAAGAAGTGGACATAATGATGC
TCATGAGCATGCAAGAGGAAATGACCGAAAAGTGAGCACATTCTCAATTTCAAGCTCTCA
CTCAAATGGAAAAGAGTCATCAATCGGGATAGGGTGTCCGGAGCAAAGCTACTATAGAAG
GATTACTTTGATCAGGGTCCAACTTTCTCGGATGATACATTTTTTCATCATCGTTTTCGC
ATGCAAAAACCATTGTTTATGCGCCTTGTGGAGGGAGTGGAGGCACACGATGACTACTTT
AGGCTCATAAGGGATTATTGCGGTCAACTTTCTTTCTCTGTCAAGCAGAAGTGGACGACT
GCTATGAGGATGCTTGCACTTGGTACTGCGGCAAATGTTGTTGGTGAGATGGTCGGGATG
GGGGAGAGCACATGCCTGAAAACTACTATCAAGTTTGCCTGTGCTGTGGTGGGGGTGTTT
GGAGCAGTGTATCTGAGAGAGTCAAATGCACAGAACGCGAAGAAGTTGATGGCTATTGGA
GAGTCCACAGGGCTTCCAGGAATGCTCGAATCAATCGATTGCATGCATTGGCAATGGAAG
AACTGACCCAAAGGTTTATGAGGAATGTACCAAGGTCACACAAAAGAGGCCACCATCATA
CTAGAGGCGGTGGCATCACATGACTTATGGATTTTGCATGCTTTATTTGGAATGTCAGGT
TCTCACAATGACATCAATGTGCTTCAACGGTCTCCAGTGTTCAAGAGGCTTTGCAACGGG
GAATCACCTCCGTGCAAGTACATAGTCAACGACTGAGACTACAACATGCGATACTATCTT
GCCGATGACATATATCCTCAGTGGGCTGCATTTGTGAAGACCATATCCGAATCACATGGC
AGAAAGAAAAAGCTAGCACTTCGCAACAATGTAGGAAGCAGCTAGGAAGGATGTGGAGAG
GGCTTTTGGAGTGGTGCAAGCGCATTGGGAAATTATTCGTCGGGCTACAATGATGTGGGA
ACAAGAAACTTTATGGGAGCCGATGACATGTTGTGTTATTTTGCATAGTATGATCGTCGA
GCATGAGGGTGATGGTGTAGCCCAAACCAATGATTTTGAAGCACTTGGAGAACAAGTTGA
AATCTCTGAAGATTGATACGTCCATTTTGCATCATGTTTTCATGTTGATATTTAACGCTT
CTTTGGCTGTTATTTCACTTTACGGTACTATTCTTTTGCCTTTTTTATCTTATTTTGGAA
GGTTTTCAAGCGTATTAACTTCGTATATCAGACATCATACAA