morexGenes - Barley RNA-seq Database

Contig contig_7795
Source Contig contig_7795
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_7795 (7737 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_7795

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77923	3	1733 bp	MLOC_77923.2	Available	Available	LOC_Os06g46590.2, FRAME:+3, EVALUE:4e-96, 13106.m10572 protein expressed protein
CDS Structure of MLOC_77923

Contig Sequence (7737 bp)

>contig_7795 7737 assembly3_WGSMorex_rbca.fasta
CGTGCACGCCACACGCGCCCCCCACGTGTCTCGCCGCCGCCGCCCCCGCTCCCCCCCCGG
GCGCCGCCCCGCCGCCTCTCACCGTCGGTTCCTCCTGCTCCTCCCCCGACGGCCGCAGCG
CCCACCCAGCACCGCCTGCCCTCGACCTAGCCCTCCCCGGTTCCGAAGGGTTTGACAGGC
GATGGAGAAGGGGAAGTCGGTGGTCGCGGAGCTCGCGGCGTCGTTCAGCGGCGTCCAGGT
CACGCCCCGCCGGAAGCCCGCGAGCACGCCGCCAGCGGCCAACTTATGTGAGCTCCCTTT
TTCTTTTCCCTGTGATCCATGATTTCCTTAAATCATGTGTTCTATGTGCCGTCAGTCATG
GTTGCGTACCATTCATTGGTTTATAATAAAGCGCGCGCTTAGGGTCTGCATAATCAGAGT
TCCTGCTAGCTTTTTTCTTTTCCTTTTGAAATTGTGCTATCTTTCTTTTAGAGATGGGAT
GTTTCTGCTTTCTAGCGCTGAGTATGGGATTTTTTTTAAATAAGAGGGGTCTCCCCCCGC
CCCAACTTTAGTCAAGCCAAGGCAAAGCACAACCAAGTTTTAGCAGCTCTCGGCAACAGC
GAGAGATAGTTGTCAGTCTGTCACAGATACATACGATGGGCACTAGAAGGTCTACCCAGA
GGAAATTAAAGTTATTACATGCCATGCTGAGAGGGAGGAGCAACAAAGATATAACATGAA
GGCTTCAAAACACACACTCCCTCCAGCAATATAGGCTACCAAGCTATCCTAAGCAGTTCC
CCTCTCCGCCGATCCAGCAGCCTTATGCACCGGAGAAGAAGAGCACCCTGGGCCTCTCAA
CACAAGATTTTCCATTGCCTGATCATGTCCCCCACCAAATCCAGGACACGGCGCATACTT
CGCCACTTCCTCCCCTGAAAGACAAAGTCATTTCGCAACAACCATAAGCTCCACAAAGTG
GCAGAAGTCACTAAATTATCTGCCTCACGAGGTTTCCCTTTTTTCCAGGAAATAGCCAAG
TAAGAAAAGCCAGAAGGCACATGTATACCACACACATCAGCAATAATCAGCCAGGTCTCA
TGGGCAATAACACAATAAAATAACAGGTGTTGAATTGATTCAGGATTAGAACAAAAAACA
CAAGTACCATCATCAACATGCCTTCTCTTGGCTAAATTATCCCTAGTCAAACATTCGTTG
TAGAAGGCAAGCCAAAGGAAAACATGGATGTTGGGAGGGACTTTGATTTTCCAGATGGAA
TTTTTAATATCAGAAGACACCCCTCCAAAGTTGATCATTTTGTAAAAAGATTTAACTGTA
TACTTGCCAGAAGGTTCCAATGTCCAAATGGGACAATCAGCCGAATCAGAAAGAATGTAT
ATGTACTAACCAAGTTAGACAGGGCATACCATCTTCCCAACAGATAATCATCAACACACC
TCCTAAAAGTTAGCTGAAGGTTTTCACCATCCCAGACCTGGGCAAGGGAGGCATCTTGCT
GCTGGCAAATTGAGAAAAGGTCCCAAAAGAGAGTTTTCAGAGAGCAATCTCCATACCATA
TGTCATGCCAGAAGGCAATATTCCTTCCATTGCCAGGAGACCACTTCTAGAATATTTTTG
CAGCCCCTAAGGCCCAAGTGACACTCTTCCAAAAAGGAGAGCCCACACCAGGTTTAGGCC
AAAAAATATTTGGTTTATCAATACCATATTTATAGCCTAAGATTTTTTTCCAGTCCTTAT
CTACACCATCATAGTATCTTTTACCCCAAGAGGCCAGCCAACAAGTCCATGTTGAACTCC
CTAAAATTAGGGACTCCCATACCCCCAAATTCTTTCCTCCTGGAGATCAGACCCCAATTA
GCTAGATGGTATTTATGGACCTCCCTCATGTTTCCCCAAAAGAAATAGGACATTTGAGAG
GTGATGTCATCAATGGTCCATTTAGGAAATTGCATAATAGACATAAGATAGGTGGGAATA
CTAGCAATACAGGTAGTAAGAAGAATTAATTTGCCTCTATAAGAGAGATACCTACCCAGC
AATATTCTTAATAATCCTATCAATAATAGGCTGCAGGTCTTCCCTCAGTTTTTTTAAAGG
AAGGGGTACCCCTAAATACTTAAAGGGGAAATCCCCAAATTGGCAGCAGGAAATCTGTGC
AAAATCCTTAGTTATATCCTCCTCCACATTCAAAGTATGCAAGTCACTTTTATGAAAGTT
AATTTTCAATCCAGACAACTTCTTAAAACATGTGAGAATCCATTTCAAATTCCTAGCATA
CTCCAGTGAGTCTTTTAAAACAAGATGGTATCATCAGCATATTGCAAACTGATGATCCCA
CCAGTTATCACTTGAGGAAGCAGACCAGCAATCGGACCATGACTAGATGCCTTAGAAAGC
ATCTTAGTAAAAACATCAGCAACTAAATTAGTATCATCAAGTCTAACTTGAAAAGTCCCC
TGATGCAAAGTACTATAAATTCAACCAACCCACTTCTCACCAAAGCCCCTAGAAAGGAGC
ATCTCTCTGAGGAAATCTCAACTAACTCTATCATAAGTTTTCTCATAGTCAAGCTTCAAA
ACTATCCCGCCTTCACCAGATTTATGGACCTCATGAATAACTTCATGGGCCATCACCACA
CTTTCCAGGATAAATCTCCCTTTTATGAAAGCAGTTTGATTCAAGGATATGAGTTTGTCA
CACAGGGGAGAAGCCCCGGTAGTCATAGCCTTAGAAAAAATCTTAACCGCACAATTACTA
AGACTGATAGGTCTAAAGTTTGCCATCTCCCTGGCTTGAGGGACTTTGGGGATAAGAGTG
ATAAGAGCAAAATTAAGCCTCTGGATATCCAAAGAGCCCTCCTCAAAGTCCCTAACCATC
CACATAAAGTCAGATTTAATAAGATCCCAGAATTTTTGATAGAAAAGAAAAGACAATCCA
ACAGGACCAGGGGCTCCACAAGCATAGGAGCTCATGATGGCCTACTTAATTTCCTCCTCA
GAAAAGGGTCTTTCAAGATTACATTTGTCTGATTCAGAAACCAGGTCTCCCTCAGCCCAA
AAGTTAGGATCCAAATGGATATCAGGTTTGGGTTCAAAGGCAAACAGATATTTATAAAAA
TCAGTAGCAACTCTCAGCGTATCCTGAGTTTCAGTAACCACCCCATCAGGCCCAACCAAC
TCCGAGAGATGATTTTTCCCATGTCTATGATTAGCTAAAGCATGGAAGTAGGCATTGTTG
CGATCACCTTCCAAAAAATTTCTATCTCTAGACCTCTGCGAGAGGGCAGTTTCCTCCTTC
CAAATCTCTTCCAACTCTTTTTTTAACTCTTTCATCCTATCAAAATCCACAACTGACAAT
TGTTGGGATTCAGATAGAACATCTAGAATGTCATATTCCATAAGGAGGGCTTTTTTCCTT
TTTCTTATAGCTCTCAGTATTAATACTTCAGCCTTTCAGCTTTTTCCTAAGGACCCTGGT
TTTGACCATCCAGTTATCAGCAGAGCTGGAAGATGCAGAAATAGAATTCCAGGCATCATT
GACAACCTGTTCAAAACCAGGTTGGGACAATCACCACTTCTCAAAACGAAACATCTTAGG
GCTGGAAATTTTCCTAGCCCCAGTATCTAGAACCAGAGGAGTGTGATCACTACCAACCCT
GGGGAGGGCAGTAAGAGAGGATAAAGGATAATGGGCATCCCAGTCCACAGAAGTGAACAC
CCTATCTAGTAAAGCAAAAATAGGTGACCCCTGATTATTGGACCAAGTGAACTTCCTGTT
AGAGACAGAAATCTCCATAAGCCCCCATCTATTGATCCAGCCATTGAACAAGAAGGTATT
TTGTTGATTCAGTAAACCATTGCTTTTATCTTGGTCTCCCCTAACCAAGTTAAAATCTCC
ACAACATATAATAGGATAAGAAGCAGATTCAAGGATATCATGTAGTTCAGCAATGAAATC
CATCTTAAATTCAGGGTGAGCATGGGATGTTTATGTTAATTGCTCAGCCTGGGATAGGAA
AATAGACCGTGAGCTCTCTGAGGTGGTAAAACAGATGAGGGCATTGGTCTCCAGGGAAGG
TGCAATGGATGTGGTTCAAGATTCAGTTCGACTGTTCCATTATTAATGGCGTCTAGGTGG
AATGCTTAATAAGTTTCATCTTGCAGCAAGCAACAAGAACTGCAGGACTCACTTGTTTCT
AGGTACTAGAGTGCATGCGCTTGCAAGTTCCAACAAGTTAATTTCGGGGTTGAGTTAATT
CATTGATGTTGACTTTCATCCGGTGGCATATAGATTGGAACAACTGAGTTCTGTTTCTTG
TTATTTTAGAATTTACTGTGGATTTGATGATAGATTTTAAATTTGAACTAATTCAGATTC
TCCCATGAAGAAGGCCAGGCCTCGGAAATTGGTCAGTCTGTGCATTGGCGTCCTTGGTCA
GCATCTTGAAGATATTATCAATGATATTTCTGAATTTACTGAGTTATTTCCACCCCACAT
AAAGGTATCTATTTACATCTGTGGTCTTCATTTTGACCCTAATGCCAAATACACTATGTA
CTCCAGATCTATAATTACTTAAATAGCTAAGTTCATTTTTTACTTCTAGTTGAAACCCAG
TAAATTGAGAAAGTGAGCCATTGGGGAATATATGTTGTTCGTCTAGGTAGTTTTAGACTT
ATAATCAAACAAAAACTATGAAAAGTAGGAGGAACAATGTATGTATTCTTGAAGGAGAGC
ATCAGAATGGGGGCTTGATTCCATGACTTCAACCACAAGAACCTTGTGCCTGCCAGTACT
ATTAGGTTACATACTTCCCCCTGTTATTCCTTATGGACGGTGGTTTGAAATGCCGATTTC
TTCTGCTACATAGTAAAGTCTCTTTCTGCTTTATTTGTAACACTTCAGACACGGAAATGT
ATTTAAGCAACACTGAAAATCTATACTTCGCTTTCTATGCATGATGTGGAATCATGAATC
TTGATGAGGTAAATAGCACAGAAGACATACACCTTGAAATTAGGAACTTTAGAAGCGAAG
ACAGCAAGATTCAACTATTGGGCAACAGTTAGGGAAAGATTGTTTGATGAGTTTTTTTTT
TGTGACTTGCTTATAGAATACTCATGTCTGATGTTCAGTTGAAGTGCCAATTTAGGTATT
AGTGAAATATTGATGGTATATTTACTGCATATCGTGTTACTTTCTTCAACACACTGTTAT
TATTATCTGCTCATACCTATACATGTAAGATGTAACAGTAATAGTTAATTGTATGATACA
GTTGGCAATTCTGTCTATCGCAAGGAGGAGGAGATTACTGAATGACGATGTTCTGGTTTC
TCTTGTTGATAGCTCCTGGAAGATCCTAGATATATCTGGGTCTGAGGTTACTGACGTTGG
CCTGGCTACTGTGGCACATACTTGTAGTAACTTATGGGCAGTTGATATTAGGTAAGCTTT
GGTGCTATGTGTCAGCTATTATTTTGTGAAAGCTAAACAGACAGTCCGGTTTGTGGTTGC
ATTATATTCATGACAAATCTTCCTTTGCAGTCGCTGTGAAAAAATAACTGTTGCTGCCGT
TTCAGAAATTATATGCCACTGCCCATCCCTGGAGATATTAAGATGCGGGTATGACCTCCA
ATTAAATGCATCTACAAGCTTAGGGTTACTTTATACTTCCTCCGTTCCTAAATATAAGTC
TTTTTAGGGATTTCACTAGGGGATTACATACGGAGCAAATTGAGTGTATCTACACTCTAA
ATTATGTCTATATACATCCGTATGTAGTTCCCTAGTGCAAACTCTAAAAAGACTTATATT
TAGGAATGGAGGGAGTAGTTTATAGCGCTGTTTTACTTATATCATCTAGTTGCTTGTGAT
TGCCATGTGTTTTGCCTCAATTCTTTGTGAATAAGTCAAGTGTGTGGGTGCACTGATCAA
TTCCTACCTGTAAGGTTGTAACATCGTTGAATTCAGCGGTCCCATGAAACTTGCAAGTGC
AGGGCTTTTAGATTTCGAGTGTTGGAGTTGCTGAAGTCAAATTTATGCAATTAGGAACTT
AAAATTAGCTTGTTCTTCATATGTAACTGACAATCAGCAAATGGAAAAATGATTCATTTG
ATTTGGTGTCAATTGTCAATATGTAAGTACATTGTCATGCACCATGTGTGCTCTCTGTAA
ACATTCGAGTTACTGAAATGAAATGTGCAGTTTGGAATTGAAAAATAGATTGTCGTACAT
GCTTAACTAGTTCAAACCCTGGAAGGAAGTTGTTATTTGCTCTTTCTCTCTCTCTCTCCC
TACCTTGTCCCTGCTGGCGATTATTGCGGCTTTCAATTTGACTGCATAGTATTCCATGTA
GCAGGATATGAAAACGGCTTAAATCCCTTTATTGCAGAGGTTGTCCAAGAAGCGAATTCA
CTGCCCGTGGGTGTGTCAATCTCCTGAAACCCAAACTGAATACCCTTGAAGAGGACTCAT
GGGAGGAGCTCGAAGCAGTTGATTTCGGCAGTGGCGCGCAATCTTTAAGATGGCTAGTTT
GGGTAAGCATGCAAGTTCTCTCATCTCCGAACAATGAATTTTGCATTTCACAATCAAGTA
ATGTGACCCTTATGTTTCATCTTTTGTGTCTTATAGCCCAAGATAGGTGAGAACTCAAAG
GAAATTCTCGCCGCAGAGTGTCCTCGTGTTATCGTCAACCCGAAGCCATCACTCCTTGAC
CTCGGTGGATCCAAGACCCCAAGTGAAGCATTGGCAAGCGTACCACTGGATCATTCAGTG
GTACAAGACATTGATCCAAAAACATGGGCAGTTTCTGCCGCTCCTCGAAGAGCCGTTGCT
GCTCCACCTCGTCCAAATGCTCCTCCTGAAATACCGATCGCGGAGAGGTTCAGGCTAGCG
TATGTGGAAAGGGACGCAAGGCTGGCACCAAAGAGGGCCAGGAGGGAGAGGCAGCACCGA
CGCCGTGCAGAAAGGGATTACTTGATGAATGATATCGACGCCAAGTCTGTCGCCCTTGCG
AGTAAATACCTAAGCAAGGGCTAGTGATGACTGTTCTTGTGTTGTTTTGGGGTGTTGTAT
GTATTAGTGGTTGTCTAAATACAATGGAAGAAATGCCCGCAAAAAAAAAAGTACTTACTG
TGCAATGAAAGAAATGTCGGGTTGTGTAAGAAAGGAACAGTTGCATCCCATCAGGAGCAC
GGTGGAGGCATCGATGCATCCAACTAAATGAAAACTGAAGCAGTTTTGCATGAGCTTTGT
GCTTGCCATGTTTAATTGTTTGTACATATGCTTGATGGACCATTTTTGGTAGAGCAATCA
GGGATGCAGATCCAAACATTACAGAAGATTCTTTTTTTTACATAAAAGATTACGCAGATA
TTTTCTACCCCCAAAGGTTGCACTTCCTACATCTGAAAAGGAAGGCTGCAGTTCCTAAAA
AGAAAGAGAAGCATCTACACAGATCTAACGAAGCCTTGGACAGCAGCTGAGCGGCACAGC
AGTTGGTCTTCTGTACGCAGTATCCAGCTCCGACTGCGCCGCCGCGAACGCAACCCGCAG
AAGAATCGACCGACGTATCAGTGGGCGGCGAGGAGCTCGGACGGCGCGGCGGCGAACGCG
CCGAGGAAGGCCTCCAGGGCGCCCGGGGACATTGGAGGCGGGGGCAGGAAAACGACGCCG
CGGGCGGCGGCGAGCTTCTTCCGGAGCGGGTACCGCATGCCGCCCCGCGCCCCACCG