Contig Data
morexGenes
Links



Map Locations of contig_77911 (3346 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_77911

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77918 5 2846 bp MLOC_77918.2 Available Available LOC_Os01g36640.1, FRAME:-1, EVALUE:0.0, 13101.m03710 protein disease resistance protein RPM1, putative, expressed





CDS Structure of MLOC_77918






Contig Sequence (3346 bp)

>contig_77911 3346 assembly3_WGSMorex_rbca.fasta
TTCGTATTACTCATTCATTTTGGGTCCTGGGACGATCCGAACATTCCGTAAACTCCATGG
ACCGGTTACGGTGACCTCGTCAAAAGTCGTAGGTTTCGTACATTCTGGTCAGTTTTCTAT
GTTATTACTCACTGATTTTGTGTCTCGGGGCGATACGAACGCTTCGCGAACTCGTTGGAC
CGGTTACTGGAAGCTCATCAAAACTCGCAATTTTGATCCATTCTCGTCAGTTTTGTACAA
TTATATGTCTGAACACTAGGCCAATTCCTTGAAGGATTTCCCCGCCTGTGATGGGACAGA
TGAGAAAAAGAGCACCTCCATTCCTTTTCGTAGAAACAAGTACTCCCCCTGTTCCAGAAA
AAGTGTCATTGATTTAGTACAACAACGGAGGGAGCATTTGTTTAGAAAACTCGGTGTTCC
TTTTCTCAGAAAAGCAGAGGAACTTTGCATTATTGGATGAATATTCAATCAACATCACTC
GAAATCTAACTTACGTACATTCCGTCTCCAATACGACGACGACAGAGCAAAGCTCAGCTC
CCTGATTTCATCGTCAATTCATCAAATGCAGTCTTTAATTTACGGCAAAATAGTTCACAA
TATGATCATGCTATCATGAACAAAGTCTGTAGCATACGCCTGCTGAATAGTGAGGAACAG
ATACTTGTATATTGCTCAGTAATGACTGAGCAAAGCTAGAAATGCCAAAGGAAATAGTTA
TTTAGGCAACAAAAACTGATGGGCAGAATATTCATTGCACACAGCGTAGTTTCAAATAAG
ACGACATGCGTTGGCATTGTTCTCCACTTCAGGACTGTGTAGTACGCCGACTCGTGCTTC
TTTTTCTTCTTTGCAGCTAGGATATCGTCAGGTCGCGGGAAATATATCTCTACATTTGAT
CTTACTTGTCTTCGATCCAAAGCAGGATACATGGCTCATATATAGCAGTATTAACAAGGA
AGAGCCCTGATTTCCACTGAGAAACTGATGTAACAACCTCCTTGTCTCCTCCCTAATGAG
CCAAACATGTCTGACATTGCAACGCAGAATCTGATAACAGTCGCAAAAGCATCAGTAAGT
CAGTTAGTCGATCAGGTGAATGAATCACCTTAATTAAGTTACTCTGCTACCAATTCTATC
AATATATAATATAGGCACGAAAGACAAAACAGCAACCCAACCTTTGGAGGCTTGGAGCAG
TGACCATCACCTAATCCTTTCCCAAAGTCCTTTCTGCGTCAGTTCAACGGTAACATTCCT
TATGTGGCTAATCTTCATTACATCTTCGTTGCATTCATCTGATCCTCTGTTCTGCCGGAG
CTTCTCTATTAACTCTTCCGATGTGTCCTCCAGATGCAATTTTTCAAGGGCTGCAAGGTG
TTCAATGCCATCGGGAAGAATCTTTAGCTCAGGACAGTCTGCCAACGATAGCTCAACGAG
GTTTTCAATTGCGCCCTCCTCTATTTCCACTTGGTTGAGTTGTGATGCGCCCCATATGTA
CAGATCCCTAAGTTTTGGAAATGACCCCGCGCACAAATTCAACCTCTTCCCTTCAAAAGC
CCTTGATAGGTTAAGAAAACATAGACCGCATAACACAAGCAGACAGGGAAATGTTCCCTC
ATCAATACTGGAGAATGCCAGGTCCAACCGAGTGAGCTTATTAAGGTGTGACCAAGAAGA
GGAAAGCCGAGGCATCAATGGTTTTTCTAGCTGCCCTCGTAAACCAAGGAAAGAAAGGGT
TGGAGGTAATTGTAGCCCTTCCAGCTGCAGCATCTCATTCTCAGCTGCAGCGATAACTTC
GAGATGAACATGATGGCTCATTTTGGCAATAGCATTGCTCAAGTCAGCAGAATGTTCACT
TCTCACGTTGCAGACGCCGAATGTTCTTAGCTCTATGAGGGCTCCAACTTCACGCAGAAA
CTCTGGACTGGCTTTGACGTATTGTAGAGCCCGCAGTCCTGCCAAGTGATGAATGCCATT
ACGCACCTCGACTGCAGCTACACTTACAGTTTCAAATGTGACGGAAGCAGATACGTACAG
GTATCTCAACTTCTGAAGTTTTACAACACTGTTAGGCAAATACTTCAGCTTAGACCTCAA
AGCATCCAAGACTTCCAGGTTTTGTAACCTACCCACTGCTTCAGGCAGGCTTTCGACGTC
GGTATCTCTAAGGCCCAAATAACGCAGATTAAACAAGTCAAATACTTCATCAGGCAACAT
CTTCATACAAGTACCTTGAAGATCCAATGTCGACAGCAGATTAGAAGATGTTAGGATAGG
CTTCAGCAAATCAATATCGATATACCTCCCAAATACATGGAGCTCACGGAGCTGTGTTGC
ACCAGATCGGCTCAGTTGTTCAAGGTTTTTGCCCTGGACAGACATGCGACGTGCACCTTC
TACAGAAAATGCCTGAGTAACAGAGCCAGTATAAACTTTACCAAAGCATTCTTCCTTGGC
TTTGTTGAGAGCAAGAAGGCGTATTACATCATGCATCCGACAGTTTCTAATTCGTCCCGT
ATAATTCCTTTCCACTACCTGCAGTAGGCTTCGGTCCACAAGCTCAACCAATGTTTTGTT
CTCTTCCTTTTCCCTGATAAATCCTTCGGCAATCCACTGCCTCATTATTGTCTTCCTCCT
TAATAAATAATCCTCTGGAAATAATGCGCAGTATAAAAAACAATTCTTCAGATCATACGG
AAGGTCATCCAAGCTGACCTTTAGGATTATGTGAGCATCAGGGATCACATCTTTCGCCAA
CTGCGAATCCAAACCCGTGTACAAATTCTCCCATTCAGCAAAAGTTGGGGGTTTGCACAA
GAGTAGGCGGCCAATGCATGCAATAGCGATAGGCAAGCCTTGACACTTTGCTACGAACTT
CCGAGCCAATTTCTGCAACTCCAACGGGCACTGTTTGTCATCGTTATTCCAAAAGGCCCC
CTTGCAGAACAAAACCGAGGAGTGATGTGCTTGTAGTGGTTCCAAGTGAATTGCAGACTC
CCTAGTTGCCAGCAGTGACACTTCATGCTTTCTTGATGTAATAACAAATCGGCCGGTACA
ATTAGAAGTTGGAAAGACATTTCTTATCTCCAACCAAACACGCGCAGCCCAAACATCATC
CAGGACCAAGAAGTACTTTTTACCTTGAAGGTAGTCATGGATGGACTCTGCAAGGCCTCT
CATGTCAATGTTAGCAACATCGACCGCAATGCCGAACTCGACCACGATCTTTTTCAGCAG
GTCTTCAATACAGTAACTCTCCGATATTGTTACCCACGCCGCGGCGTCGAAATCCAATTT
CATGGCGCTGTACACGTGCGCAACCAGAGTGGTTTTACCTACACCC